Ciconia boyciana (Oriental stork): 140651631
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Entry
140651631 CDS
T10948
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03020
RNA polymerase
cboy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
140651631 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
140651631 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cboy03021
]
140651631 (POLR2B)
03400 DNA repair and recombination proteins [BR:
cboy03400
]
140651631 (POLR2B)
Enzymes [BR:
cboy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
140651631 (POLR2B)
Transcription machinery [BR:
cboy03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
140651631 (POLR2B)
DNA repair and recombination proteins [BR:
cboy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
140651631 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
140651631
NCBI-ProteinID:
XP_072717416
LinkDB
All DBs
Position
5:51382158..51402810
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcaatatgatgaagacgatgatgaaatcacccccgac
ttgtggcaagaagcgtgctggattgttattagctcctattttgatgaaaagggtttagtc
aggcaacagctggattcttttgatgagtttattcagatgtctgtgcagagaattgttgaa
gatgctccaccaattgatttacaagctgaagcccagcatgccacaggagaagtggaagag
ccgccccggtatctgttgaagtttgaacaaatctatctctccaaacctacacattgggaa
agagatggagcaccctcacctatgatgcccaatgaagccagactgagaaaccttacgtat
tcagcccccttgtatgtcgatataactaaaacagttattaaagaaggagaggatcagtta
cagacacaacatcagaaaacttttataggaaaaattcctattatgttacgttcaacatac
tgtttgttgaatggcttaactgaccgtgatctttgtgaactgaatgaatgcccacttgat
cctggtggctactttatcattaatggatcagaaaaggttctgattgcccaggagaaaatg
gctacaaacacagtatatgtgtttgcaaagaaggattcaaaatatgcatacacaggagag
tgtagatcgtgtctggaaaattcctctcgaccaacaagtaccatatgggttagcatgctg
gccagaggtgggcagggtgcgaagaagagcgctattggtcagcgcattgtagcaactttg
ccatatatcaaacaagaagtccccatcataattgtctttcgtgcactaggctttgtatct
gacagggacattttagagcacatcatatatgattttgaagatccagaaatgatggaaatg
gtcaaaccttctctggatgaagcgtttgtcattcaggagcaaaatgttgctctaaacttc
attggatcaagaggtgcaaagccaggtgtcaccaaagaaaagagaatcaagtacgctaaa
gaagtcttgcagaaagaaatgctcccccacgttggtgtcagtgacttctgtgaaaccaag
aaggcctattttctagggtatatggttcatagattgttgctggcagcgctgggaagaaga
gagcttgatgacagagatcattatggcaacaaaagactggatcttgctgggccactgtta
gctttcctgttcagaggaatgtttaagaatttgctgaaggaagtgagaatatatgcacaa
aagtttattgacagagggaaagatttcaacttggaactggcaattaaaacaagaattatt
tcagatggtttgaagtattcactggcaactggaaactggggtgaccagaagaaagctcat
caggccagagcaggagtatctcaggtgttaaaccgcctgacttttgcatctaccctttcc
catctgagacgcctgaattctccaattggtagagatggtaaactagcaaagcccagacag
ctacacaatacactgtggggaatggtttgccctgctgagactccagagggtcatgcagta
ggacttgtgaagaacttagccctgatggcttatatttctgtggggtctcagccatcccca
attttggaattcttggaagagtggagtatggaaaacctggaagaaatatctccagcagca
atagctgatgctaccaagatctttgttaacggctgctgggtaggaatacacaaagatcca
gagcagctcatgaataccctaaggaaactccgtcgtcagatggacatcattgtgtcagag
gtctcaatgattagagatattcgtgagcgagaaatccgcatctatactgatgcaggcaga
atttgtcgaccccttttaattgtggaaaaacagaagttgctgttgaagaaaaggcatatt
gaccaactgaaggaacgagagtataacaattacagttggcaggatctcgtggccagtggt
gtagtagagtacattgatacactggaagaagagactgtgatgctggcaatgactccagat
gacttgcaagagaaaggtgtggcatattgttcaacatacacgcactgtgagattcaccca
tctatgatcctgggagtatgtgcatctattatccctttccctgatcacaaccagtctccc
aggaacacataccagtctgctatgggtaaacaggctatgggagtttacattacaaacttt
catgttcgtatggatacgctggcacatgtgttgtattatcctcagaagccccttgtaaca
acacgctccatggagtacttgcgatttagagagttaccagcaggtatcaactcgattgta
gccattgcatcatacacaggctataaccaggaagactctgtcatcatgaaccgttctgct
gttgacagaggctttttcagatctgtgttctatcgctcatacaaagagcaagagtctaaa
aaagggtatgaccaagaggaagtttttgaaaagcctacacgcgaaacttgccaaggtatg
agacatgcaatctatgacaaacttgatgatgatggtttgatagcacctggggtacgtgtg
tctggggatgatgtcatcattggcaaaacagtaacgctgccagaaaatgaagacgaactg
gaaagcactaacagacgtttcacaaagagagactgtagcacttttctgcgaactagtgag
actggtattgtagatcaggtcatggtaacccttaaccaggaaggatacaagttctgcaag
attagggtacgctctgtaagaatcccacaaattggagataaatttgccagcagacatggt
cagaaaggaacctgtggtatccagtacaggcaagaggatatgcccttcacctgtgaaggc
atcacacctgatataattatcaacccccatgccatcccttcccgcatgaccattggtcac
ttgattgagtgtcttcaggggaaggtgtctgcaaacaagggggaaattggtgatgctaca
ccttttaatgatgctgtcaatgtgcagaagatttccaatctcttatcagattatggctat
catctaagaggaaatgaggtcctctacaatggcttcactggtcgaaaaatcacatcacag
atcttcattggtcctacatattatcagcggttgaagcacatggtagatgacaaaatccat
tctcgtgcaagagggccaatccagatacttaacagacagcccatggaaggtagatctcgt
gatggtggtcttcgttttggagaaatggaacgagattgccagattgctcatggagcagcc
cagttcttgagagaaagattgtttgaagcttcagacccataccaagtccatgtctgtaac
ctctgtggaatcatggcaattgcaaacacaaggactcacacctatgaatgccggggatgc
cgtaataaaactcagatatctttggttcggatgccctatgcctgtaaactcctcttccaa
gaactgatgtctatgagtattgcacctcgtatgatgagtgtttag
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