Ciconia boyciana (Oriental stork): 140652969 Help Entry 140652969         CDS       T10948                                  Symbol VPS39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism cboy  Ciconia boyciana (Oriental stork) Pathway cboy04140   Autophagy - animal cboy04142   Lysosome biogenesis cboy04148   Efferocytosis cboy05132   Salmonella infection Brite KEGG Orthology (KO) [BR:cboy00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     140652969 (VPS39)    04140 Autophagy - animal     140652969 (VPS39)    04148 Efferocytosis     140652969 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     140652969 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cboy04131]     140652969 (VPS39) Membrane trafficking [BR:cboy04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     140652969 (VPS39) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin VPS18_solenoid_2nd Beta-prop_RIG_2nd DUF4145 LIF1_N Lgl_C EcoR124_C Motif Other DBs NCBI-GeneID:  140652969 NCBI-ProteinID:  XP_072720568 LinkDB All DBs Position 6:complement(30475148..30504993) Genome browser AA seq 875 aa AA seqDB search MHDAFEHVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIKKDIGCNRFEVTLEKSNK NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQQSDTGE EVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD GKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPIAME HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGTNIIYVASNHFVWRLIPVSI ATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIHHIKNLFAFNLFCQKRFDESMQVFAK LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKL NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL HLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLGFLIENFKSLTIPYLEHIIHVW EETGADFHNCLIQLYCEKVQGLMKEYLNSFPADKTPVPAGEEGGDLGDYRKKLLLFLEKS SWYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTNMAENYCHKHYDRNK DGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAALQVLELHHSKLDTTKAINLL PANTQINEIRIFLEKVLEENAQKKRFNQVLKNLLRAEFLRVQEEQILHQQVKCVITEEKV CTVCKKKIGNSAFARYPNAIVVHYFCSKEVNTLDA NT seq 2628 nt NT seq  +upstreamnt  +downstreamnt atgcacgacgccttcgagcatgtaccgatcctggagaagctgccgctgcagatcgactgc ctggcggcctgggaggaatggctccttgttggtaccaaacaagggcatcttctgctttac aggatcaagaaagacataggttgtaataggtttgaagtgacgctagagaaatccaacaag aacttctcaaaaaagattcagcagattcatgttgtttctcagtttaaaattctggtcagt ctattagaaaataacatttatgtccatgacctgttgacatttcaacaaatcaccacagtt tccaaggcaaaaggtgcatctctcttcacttgtgatcttcagcagtcagatacaggagaa gaggtgctgagaatgtgcgtggcagtgcggaagaagctacaactttatttttggaaggac agagagttccatgaactacagggggacttcagtgtacctgatgtacccaagtctatggcc tggtgtgaaaactccatctgtgtaggcttcaagagggactattacctgatacgggtggat ggaaaaggatccatcaaagaactgtttcccacagggaagcagctggaaccattggtagct cctgtagcagatggaaaagttgcggttggccaagatgatctaacagttgtgctcaacgaa gaagggatctgtactcagaaatgtgctttgaattggacagatattcctatagctatggaa caccagcctccctatatcattgctgttctgccaaggtatgtggagatccgcacttttgaa ccccggctgctggtacagagtatcgagctgcagagaccacgcttcatcacctctggaggc acaaatattatatacgtggcaagtaaccactttgtttggcggctcattccagtgtccata gccacacagatccagcagcttctgcaggacaagcagtttgagttggctttgcagttggca gaaatgaaagacgattcagatagtgagaagcgacaacaaattcaccacataaagaacctc tttgccttcaacctcttctgccagaagcgctttgatgaatccatgcaagtttttgccaag cttggtacagatcccactcatgtgatgggtctgtatcctgacctcctgcccacagattac aggaaacagctacagtatcccaaccccctgccagggctctctggggcagagctggagaag gcacatttagctctgatagactacctaactcaaaaaagaagtcagctggtgaagaagcta aatgattctgatcatcagtccagtacctcaccgctcatggaaggaacacccacaatcaaa tccaaaaagaagctgctacaaatcattgataccaccctcttaaagtgttaccttcataca aatgtagcactggtggcaccattgctacgtctggagaacaatcactgccatattgaggag agtgagcatgtactaaagaaggcacacaaatatagtgagctgataatactgtatgagaag aaaggcctgcatgagaaagcattacaggtactggtggatcagtcaaagaaagccaactca cctttgaagggtcatgagaggacagtgcaatatctgcagcatttgggcacagagaacttg cacttggtattttcttactctgtctgggtgctaagagattttcctgaagatggactgaag atatttacagaagatctccctgaagtggaagctttgccacgagacaaagtgcttggtttc ttgatagaaaattttaaaagcttaactattccttatctggaacatatcattcatgtctgg gaagaaacgggtgcagacttccacaactgtctgatccagctgtactgtgagaaagtgcag ggcttaatgaaagaatatctcaattctttccctgcagataaaactccagtgcctgctggg gaggaaggaggagacttgggggattaccggaaaaagcttctactttttctggagaagtct agctggtatgaacctagtcgactaattagtgacttcccctttgatggtctcctagaagaa cgtgctctgctcttgggtcgtatggggaagcatgagcaagctctctttatttatgttcac attttgaaggacaccaacatggctgaaaactactgccataaacattatgacagaaacaaa gatggtaacaaagatgtctatctgtcactgctccggatgtatctctccccacctagtgtt cattgtctgggaccaatcaagatggaagtgctggagcctcaagccaatctgcaggctgct ctgcaggttttggaactacatcacagcaaactggataccaccaaggcgataaacctactc ccagcaaatacacagattaatgagattcggatcttcttagagaaagtccttgaagaaaat gcccagaagaaaagatttaatcaagtactcaagaatctgctccgtgctgagtttctgagg gtccaggaggagcagatcttgcatcagcaagtgaagtgcgttattacagaggagaaagtg tgcactgtatgtaaaaagaagataggtaacagtgcatttgctcgataccctaatgcaata gttgtgcattatttctgctccaaagaagtcaacacattggacgcctga

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