Ciconia boyciana (Oriental stork): 140653050
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Entry
140653050 CDS
T10948
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy04140
Autophagy - animal
cboy04148
Efferocytosis
cboy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140653050 (VPS18)
04148 Efferocytosis
140653050 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
140653050 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cboy04131
]
140653050 (VPS18)
Membrane trafficking [BR:
cboy04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
140653050 (VPS18)
Hops complex
140653050 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
zf-RING_5
zf-RING_11
DUF2229
Lact-deh-memb
zf-RING_UBOX
zf_RING_Vps8
zf-RING_2
Nup54_57_C
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
140653050
NCBI-ProteinID:
XP_072720778
LinkDB
All DBs
Position
6:28912717..28928557
Genome browser
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLYRSASVQQSRASVGIPHSGYVNARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTAQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGIEGKSFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAMHADHLPSFREFPASFGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDEQVWVYPSDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFL
EKFGLLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSSL
KPSEKTQTTLLTTWLTELYLNWLGILEGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDLLLSYLEQAGTNPNRIHYDLKYALRLCAEHQHHHACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAATSQPSKSHHRPKDADTTSLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatcctggacgagtacgaagattccctctaccgctccgcctccgtgcagcag
agccgcgctagcgtgggcatcccgcactccggatatgtgaatgcacgactggagaaggaa
acaccaatatttaacaagcaaaggattgattttgctcctccagagaaaattaacagctta
gtggtctcctctaaccagctctgtatgagccttggcaaagacaccctgctcaggattgat
cttgggaagccagatgaacctaaccaggtagagctgggacgcaaagatgaagccaaagtc
tacaagatgtttttggaccacacaggctctcatctcctgattgctctgaacaccagtgaa
tgcctttacctgaacagaagtgttcagaaagtgcgagcgctctcccgctggaaaggccac
ttgattgaaagtgtgggctggaacaaatttcttggttcagagaccaacactgggcctatc
ctggtggggacagcccagggtcagatctatgaggctgaaatctctgtcagcgagggaagt
ctcttcagcactaatcctgaccagtacttccgacaggtctacactctggaggaggaatca
gggcctgccccagtctgctgcttggagattgaacgagggatagaagggaaatcttttatt
atagccaccactcgaaagagactcttccagtttgttggcaaagtgcctgaagggacagag
cagcaaggcttcagctccatatttgctatgcatgctgaccatttgcccagcttccgggag
tttccggccagctttggttttagtgagatagccttttacactccaaaactgcgctccaac
ccacgctcctttgcctggatgatgggaaatggtgttttatatggtacattggattatagc
cgtcctgattcaattttgagtgatgaacaggtctgggtttatccttccgatattgacata
actgtgaacaagccaatatccattgtacttacccagttccacttcctgttgctgctgcct
gatcgggtgaaggctgtatgcactctgaacgggcaggtggtttttcaagatctgttcctg
gagaagtttggcttactgacacgcatgatcaaagatcccacagtccagcagatatggatc
cacactgagaaagtagtgttccgctaccacgtccagcgggaatctagagatgtgtggaag
atgtatatgaatatgaacaaatttgatttagccaaagagtattgtaaagaccgtccagag
tgcctagatattgtgctggcaaaagaggcagagcactgcttccaaaacaagaggtatcta
gacagtgccaaatgctatgcactgacccagaactactttgaggaaattgcccttaagttc
attgaagccaagcaagaagaggccttgatggagtttctgattaagaagctaagtagccta
aagccttctgagaagacacagacaactctgctgaccacatggttaacagagctgtacctg
aactggctaggtatattggaaggagatccctcacagcgaaatctctatttggatacacga
gagaagtttcgcactttcctgagcagtcccaaaaacaaagactgtctatttaataaccgg
gcatctatttatgagttgttagcaagccatggggacacagagcacatggtctactttgca
gtcatcatgcaggactacgagcgcgtagtggctcaccactgccagcatgatgagtatgat
gaagctctaaatgtgctgtccagacacagagatgagaagctgttctataagttctctcca
gtcctcatccagcatattcccaagaaggtagttgatgcttggatttctatgggctctaga
ctggatgccaggaacctcattccagcccttgttaactatagccagagtgccagcacccag
cagatcaatgaagccattagatatatggagttctgtgtctatcagttggaggaaacccag
caagccattcacaactacctgttgtctctttatgctttgtgtcggccggacttgctgcta
tcatacctggagcaagcaggaaccaacccaaacaggatccactatgacctgaagtatgca
ttgcgcctgtgcgccgagcatcagcaccaccatgcgtgtgtccatatttacaaagtgatg
gaattatatgaggaggctgtggatctcgccttacaggtggatgttgatcttgccaagtcc
tgtgcagatctccctgaagatgatgaggaactccggaagaagctctggttgaagattgct
cgccatgttgttcaggaagagaaggatgtcaagaaggcaatggcctgcctctccagctgt
gccctgctgaagattgaagatgtcctgccattctttccagactttgtcactattgaccat
ttcaaggaggcaatctgtaactccctggaggactacaacaagcacattgaggagctgaaa
agggagatggaggaagccacacagagtgccaagagaatccgagaggacatccaggaaatg
agaaataagtatggctctgtggagcctcaggaaaaatgtgctgcttgtgactttccactt
ctaaaccgccctttttaccttttcctgtgtggtcacatgtttcactatgactgtctcctc
caagcagttttcccaaaccttcctgcctataagcaggcaaaacttgaagatcttcagaag
aagctggcagctaccagtcagccttccaagagccaccatcgtcccaaggacgcagatacc
actagcttggggaaggggcagcagagccgggaacagatcaaagctgacattgatgacatt
gtggcagccgaatgtgtgtactgtggtgagctgatgatccggtccattgacaagcctttt
attgatccccaaaagtatgaagaggagatgcaaagctggctgtag
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