Ciconia boyciana (Oriental stork): 140653865
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Entry
140653865 CDS
T10948
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
140653865 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cboy04131
]
140653865 (VPS8)
Membrane trafficking [BR:
cboy04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
140653865 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
TPR_VPS8_2
WD40_CDC20-Fz
Clathrin
TPR_Vps41
zf_RING_Vps8_fungal
zf-RING_11
zf-RING_2
Beta-prop_WDR5
zf-RING_UBOX
Beta-prop_WDR3_1st
WDR55
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
140653865
NCBI-ProteinID:
XP_072722596
LinkDB
All DBs
Position
7:complement(39725311..39813694)
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AA seq
1390 aa
AA seq
DB search
MEAAPEQGACPAGAEAEPCPEPPAHRLSAAELDRELDSRSELIDDKEFDIPQVDTPPTLE
SILNETDDEEESFILEDPFLLNIDNTDTHSYDTSSVASSDSGDRTHLKRKKKLPDSLSLH
GSVIRLSLLKGISAQIVSAADKVDAGLPTAIAASNLIAVGTSHGLALIFDQNQALRLCLG
STAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIK
FTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAKVELRDHP
ITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQNSVNPMLAF
CRGDVVHFLLVKRDDTGAIHVTKQRQLHLHYDLINFTWINSRTAVLLDSVEKLHVIDRQT
QEELETIEISEVQLVYNSSHFKSLATGGNVSEALALVGEKACYQSISSCGGQIFYLGTKS
VHVMTLRSWRERVDHLLKQERLTDALALAWSFYEGLSGDTSKRKAVIADRMVEILLHYAD
RTLKKCPDQGKIQVMEQHFQDVVPVIVDYCLLLQRTDLLFNQIYDKMSENSVAKGIFLEC
LEPYILSDKLMGITAQVMKDLLLHFQDKNRLENLEACIVHMDITSLDIQQVVLLCWENHL
YDAMIYVYNSGMNDFISPMEKLFKVIASPLNAGKSLTDEQVVMGNKLLVYISCCLAGRAY
PLGDIPEDLVPLVKNQVFEFLIRLHSTEGSVDEEVYPYVRTLLHFDTREFLNVLALTFED
FKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPNNTLFVNRTLFDQ
VLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIQMAEKAEFYQICEFMYERELR
YDKIIGCYLRDPVRKEEVFNYIHNILSMPGYSAEEKQSVWQKALEHIEELLFLSPCKAAD
LVAIHFSEQIESIITNLQDQFLLFQFLRSLLDPREGINQDLIHLPPCITEQFIELLCQYS
PDQVLETLKVLEYCRLEETIQITQKHQLHEASSYLLEKKGDIHGAFLVMLERLQSKLLML
TQDDESSAELPLLENIEDTLMKTIALCQRNSHNLDQQQREALWFPLLEAMMSPQKLSGSS
QCRYSESLKSLTMQVLNNMAAFIGLPLILQRILQDPVYGKGKLGEIQGLVLGMLDTFNYE
QTLLETTTNLLNHDLHWSLCNLRASVTRGLTPKQDYCCICLQQYKRRQETADEIIVFSCG
HLYHSLCLLSKECGTVTKGLMRWMCYKCNSSNKGGKLSENLSELKKGSGASLAQTSSESL
LDPQQIQAFDQLCRLNRGTSRLALLTELSRGHGGEKHGLLSVSHGDPATSSVFQNENFQL
HLAPPPLAED
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgccggagcagggcgcctgcccggcgggagcggaggccgagccgtgcccg
gagccacccgcgcaccgtctgagcgcggcggagctcgaccgtgagctggactcccgcagc
gagctgatcgatgacaaagaatttgacattcctcaagttgatacccctccaacactggag
agcatcctaaatgagactgatgatgaagaagagtctttcattttggaggatccctttctc
ttgaacattgataacacggatacacactcctacgacacatcttctgtagcaagctctgac
agtggggaccggacacacctgaaaaggaagaaaaaactgccagattctctctcactccat
ggatcagttatacggctctcgcttctgaaaggaatttctgcccaaatagtatctgcagca
gacaaagtggatgctggcttgcccactgcaattgcagcatcaaatctgatagcagtgggg
acttcccatgggttagcattgatatttgatcaaaaccaggctcttcggctgtgtctgggc
agcactgctgttggggcccagtatggagctatctctgctctcagtatcaacaatgactgt
tcgaggctcctgtgtggctttgcaaaaggacagatcacaatgtgggatctggccagtggg
aagctgctacgatcaataacagatgcccacccaccaggaacagccattttgcacatcaag
tttacagatgacccgacgcttgcaatttgcaatgacagtggaggctccgtatttgaactg
tcatttaagagggttatgggagtgagaacgtgtgaatctcgatgtctcttcagtggctca
aagggggaggtttgctgtattgaaccattacatgcaaaagttgagctgagagaccatcct
atcacccagtattcactgctggccatggcctccctaacaaagatactggttattggcctg
aagccatctctgaaagtgtggatgacctttccctatggtcgtatggacccttctagtgtc
cctcttctggcgtggcactttgtggctgtacagaactctgtgaaccccatgcttgcattt
tgtcgaggagacgtcgttcattttcttctggtaaagagagatgatactggtgcaatacac
gtcactaagcagaggcagcttcatctacactatgacctcataaactttacttggataaac
tcacggacagcagtgcttctggacagtgtggagaaactgcatgttatagatcgtcagaca
caggaggagctggagaccatagagatctcagaagttcagctagtctacaacagcagccac
ttcaaatcgctggctacgggaggcaacgtcagcgaagccctggcactggttggagagaaa
gcttgttatcagtccatcagcagctgtggtggtcagatcttttaccttggaactaagtct
gttcacgtcatgacattgagaagctggagagagagagttgaccaccttctgaaacaagag
cgtctcactgatgccctggctctagcttggtctttttatgaaggcttgtctggggacaca
agcaagcggaaagcagtcattgcagacagaatggttgaaatccttctccattatgctgat
cggactttgaagaaatgtcctgaccaaggaaaaatccaagttatggagcaacattttcag
gacgtggtgcctgtcatagttgattactgtctcttactccagcgcacggatctattattt
aaccagatatatgataagatgagtgagaattctgtagctaaaggcatctttctggagtgc
ttggagccatatatcttaagtgataagttgatgggaatcacagctcaagtgatgaaagac
ttgctgcttcacttccaagacaagaacaggttggaaaatttggaagcctgcattgtgcat
atggatatcaccagcttagacatacagcaggtagttcttctatgctgggaaaaccatctt
tatgatgccatgatctacgtctacaacagtgggatgaatgacttcattagtcccatggag
aagctgttcaaagtcattgcttctccactgaatgctgggaagtctctcacagatgagcag
gtggtaatgggcaacaagctgcttgtatatataagctgctgcttggcaggccgtgcgtat
ccattgggtgatattcctgaagatctggtacctttggttaaaaatcaggtctttgaattt
ctcatccggctgcattcaactgagggatctgtggatgaagaggtctacccttatgttcgt
accttgctgcacttcgacactcgggaattccttaatgttcttgctctgacttttgaagac
tttaagaatgacaagcaagctgtggaatatcaacagagaattgtggacatacttctgaaa
gtcatggtagagaattctgacttcaccccatcacaggttggctgtctcttcaccttcctt
gcccgtcagcttgccaagcccaacaacacattgtttgtgaacaggacactttttgaccag
gtccttgaatttctgtgcagtccggatgatgactcccgccattcagagaggcaacaggtc
cttttagaattgctccaggcaggagggatagtacagtttgaagagagccgtcttatccaa
atggcagaaaaagcagaattctatcagatttgtgagttcatgtatgaacgagagcttcgc
tatgacaaaataattggctgttacctgcgtgatccagtaagaaaggaagaagttttcaac
tatattcacaatatcctgtccatgcctggctacagtgctgaagaaaagcagtcggtgtgg
cagaaagctttggaacatatagaggagttgctgtttctgagcccatgtaaagcagctgac
ttggtagccattcacttcagtgagcagattgagagcatcattacaaacctccaggaccag
tttttactcttccagtttctgaggagtctccttgatccgagagaaggcattaaccaagac
ctcatacacttaccaccctgcattactgagcagttcattgagctgctgtgtcagtacagc
ccagaccaggttttggagacgcttaaagtcctggaatactgcagactggaagaaactatc
cagataacccagaaacatcagctccatgaagcttcttcatatttactggagaagaaggga
gatatccatggtgcctttctggttatgcttgagcgattgcagagcaagttgctgatgctt
acgcaagatgatgaaagctcagctgaactccccttgctagaaaacattgaagatacttta
atgaaaacaattgccctttgccagaggaattcacacaatttagaccagcaacagcgagag
gccctctggtttcccctgctggaggctatgatgtccccacagaaattatctggttcttca
cagtgtcgatactccgaatctttgaagagtttgacaatgcaagtgctgaacaacatggct
gcatttattggtcttcctttaatcctgcagagaattctacaggatccagtttatggaaaa
gggaaacttggagaaattcaaggacttgtcctgggaatgctagacacttttaactatgaa
cagactcttttagagacaactacgaatcttttaaaccatgatctccactggtccctgtgt
aacctaagagcttctgtcactagagggcttaccccaaagcaggattactgctgcatttgt
ctacagcagtacaaaagaaggcaagaaactgctgatgagataattgttttcagctgtggc
cacttgtaccattcgctgtgtctgctgagtaaagagtgtgggacagtaactaaaggcctg
atgaggtggatgtgctataaatgcaactcaagtaacaagggaggaaaactgagcgagaac
ttatcagagctaaaaaaaggaagtggagcatccttggcacagacaagttcagagtctctg
ttggatcctcagcaaatccaggcttttgaccaactctgccgactcaaccgaggaacctcc
agactagctctcctgacagaattgtctcgtggccatggcggtgaaaagcacgggctgctc
agtgtttcccatggtgacccggccaccagcagtgtcttccagaatgagaacttccagctc
catctggccccccctccactggctgaagactag
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integrated database retrieval system
