Ciconia boyciana (Oriental stork): 140654212
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Entry
140654212 CDS
T10948
Symbol
TNR
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy04510
Focal adhesion
cboy04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140654212 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140654212 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cboy00536
]
140654212 (TNR)
Glycosaminoglycan binding proteins [BR:
cboy00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
140654212 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
Ig_DSCAM-DSCAML_C
EGF_Teneurin
EGF_Tenascin
Pur_ac_phosph_N
Fn3_Dep-1_2nd
FN3_Tor_3rd
EGF_2
Lzipper-MIP1
TSC22
Motif
Other DBs
NCBI-GeneID:
140654212
NCBI-ProteinID:
XP_072723411
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Position
7:32484821..32513987
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AA seq
1355 aa
AA seq
DB search
MGTDSENPVLRNVLISFNLLLLGTVLKPFECRLEVTTEPAKRPAVDEEGGLANCSPPIKE
QPMVFHHIYNINIPLDSCCSSLFKSSAEEVSSEDDRLAEYAEQTSDSESQVTFTHRINLP
KQACKCSTSLPSLQELLSRIEMLEREVSMLRDQCNSNCCQENAATGQLDYTLQCSGHGNF
SLESCSCVCMEGWAGSNCSEPRCPRGCSSRGVCLEGQCICDNDYGGEDCSQLRCPAGCGS
RGLCVDGECICEEGFAGEDCSQLRCPHDCSGKGHCANGTCICQEGYAGEDCGWLHCPNAC
SGHGVCRDGLCVCEEGYEGQDCSAVAPPENLRVTGISDSSIELAWDSPGAATEYVVSYQP
AGPGSTQLQQRVPGDWSSITITELEPGIAYNISVYAVISDVLSIPVTSKVMTNLAKPQGL
NFKTITETTAEVQWEPFSFPFDGWEISFIPKNNEGGVIAQLPSTVTTFNQTGLKPGEEYT
VTVVALKEQARSPPTSDSVSTLIDGPTQILVRDVSDTVAFVEWTPPRAKVDTILLKYGLA
DGEGGRTTFRLQPPLSQYSLQALRPGARYRLAVSALRGANESRPALAQFTTEIDAPKNLR
VGSRTPASLELTWDNSEAEAHSYRVVYSTLAGEHYHEVLVPRDTGPTTRATLADLVPGTE
YGIGISAVMDSQQSVPATMNARTELDSPRDLLVTASTETSISLSWTKAMGPIDHYRVTFT
PASGMASEVTVPRDESQLTLLELEPGTEYTISIIAERGRQQSLEATVDAFTGVRPITQLH
FSQLTSSSVNVTWSDPSPPADHLVLTYSPQDEDEAQQLTLDGTRRHASLTGLQPSTEYQV
SLVAVHGTISSEPVMGSITTGIDAPKDLKVGNVTQESMIVYWSRPIAAFDHYRISYRAAE
GRTDSTAITSDATEYALRRLQPATKYEIGVKSVRGREESEVASITVHTAMDAPLGVTATN
VTPTEALLQWNPPLSEVESYVLVLTRRAVAGETILVDGVNQEYQLTNLLPSTTYTVSMHA
TNGPLTSQTISTNFTTLLDPPTNLTASEVTRRSALLSWVPPMGEIENYVMTYRSTDGSRK
ELIVDAEDTWIRLEGLSETTEYTVHLQAAQNAMRSGFISTTFTTGGRVFANPQDCAQHLM
NGDTLSGIYTISINGDLSQRVQVYCDMTTDGGGWIVFQRRQNGLTDFFRKWADYRVGFGN
LEDEFWLGLDNIHKITSQGRYELRIDMRDGQEAAYAYYDKFSIGDSRSLYKLRIGDYNGT
SGDSLTYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGINW
YHWKGHEFSIPFVEMKMRPYNHHNISGRKRRSLQL
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggggactgacagtgaaaacccagtcctgaggaacgtgctcatcagcttcaatttgctt
ctgctgggcaccgtcctcaaacctttcgagtgccggctggaggtgacaacagagccagcc
aagaggccagcagtggatgaggagggtggccttgccaactgcagcccacccatcaaagag
cagcccatggtcttccaccacatctacaacatcaacatccccctagacagctgctgctcg
tccctgttcaagtcttcggccgaggaggtgagttccgaagacgaccggctggcagagtat
gcagagcagacctccgacagcgagagccaggtcaccttcacccacaggataaacttgccc
aagcaggcctgcaagtgttccacctccctcccatccctgcaggagctgctgagcaggatt
gagatgctggagagggaggtctccatgctccgggaccaatgcaactccaattgctgccaa
gaaaatgcagccacagggcaactggattacaccctgcagtgcagcggtcacgggaacttc
agcctggagtcgtgcagctgtgtgtgcatggagggttgggcaggcagcaactgctccgag
ccccgctgcccccggggctgctccagccgtggcgtctgcctggagggccagtgcatctgc
gacaacgactacgggggcgaggactgctcccagctccgctgccctgccggctgcggctcc
cgtgggctctgcgtggatggcgagtgcatctgcgaggagggttttgccggggaggattgc
tcccagctgcggtgcccccacgactgctcagggaagggccactgcgccaatggcacatgc
atctgccaggagggctacgccggggaggactgcgggtggctgcactgccccaacgcctgc
agcggccatggggtctgccgggacggtctctgcgtctgcgaggaaggctacgaagggcaa
gactgctcagcagtggctcctcccgaaaacctgcgagtgacggggatcagcgacagctcc
attgagctggcatgggatagccctggggcagccactgagtacgtcgtctcgtaccagccg
gcggggccggggagcacccagctccagcagcgggtgcccggggattggagcagcatcacc
atcacggagctggagccgggcattgcctacaacatcagtgtctatgcagtcatcagcgac
gtcttgagcatccctgttacctccaaggtgatgaccaacctcgccaagccacagggcctg
aatttcaagaccatcacagagacgacggcagaggtgcaatgggagcctttctccttcccc
ttcgatggctgggagatcagcttcatccccaagaacaatgagggaggtgtgatcgcccag
ctccccagcactgtcaccaccttcaaccagacggggctgaagccaggggaagagtacacc
gtcactgtggtggccctgaaggaacaagccaggagccctcccacctccgacagcgtctca
accctcatcgatggcccaacgcagatcctggtgcgggacgtctctgacacagtggccttc
gtggagtggacgccgccacgtgccaaggtggacaccatcctgctgaagtacgggctggcg
gacggggagggggggaggaccaccttccgcctgcagccccccctcagccagtactccctg
caggccctgcgtcccggcgcccgctaccgcctcgccgtcagcgccctccggggtgccaat
gagagccggccagccctcgcccagttcaccacagagatcgatgcccccaagaacctgcgg
gtgggctcgcggacacccgccagccttgagctcacctgggacaacagcgaggccgaggca
cacagctacagggtggtctacagcaccctggccggggagcactaccatgaagtcctggtg
ccgcgggacaccggtcccaccacccgggccaccctcgcagatctggtgccagggacagag
tacggcatcgggatttcggccgtgatggacagccagcagagtgtgccagcaaccatgaat
gccaggaccgagcttgacagcccccgggacctcctggtgacagcctccacggagacatcc
atctcgctgtcctggaccaaagccatgggtcccatcgaccactaccgtgtcaccttcacc
cctgcctcggggatggcctccgaagtgacggtaccccgggatgagtcgcagctcaccctc
ttagagctggagcctgggacagagtacaccatctccattattgcagagagaggacgccag
cagagcctggaggccactgtggatgccttcacaggggtccggcctatcacgcaactccac
ttctcccagctgacatcctccagcgtgaatgtcacatggagtgatccatccccgccagca
gaccacctcgtcctcacctacagcccccaggacgaggacgaggcacagcagctcacactt
gatggcacccgccggcacgccagcctgacaggcttgcagccatccactgagtaccaagtg
tcgctggtggctgtgcatggcaccatcagctctgagcctgtcatgggctccatcacgaca
gggattgatgcaccaaaggacctcaaggtgggcaatgttacccaggagtccatgatcgtc
tactggagccgtcccatcgctgccttcgaccactatagaatatcctaccgtgccgccgaa
gggaggacagacagcaccgccatcactagcgatgccaccgagtacgccctccgccgcctt
cagcctgccaccaagtacgagattggggtgaagagtgtgcggggccgggaggagagcgag
gtggcctccatcactgtgcacacagccatggatgcccccttgggggtcacagccaccaac
gtcacccccactgaggcgctgctgcagtggaacccgccgctgtcagaagtggagagctac
gtcctcgtcctcacccgccgtgcagttgcaggagaaacaattcttgtggatggagtgaac
caggagtaccagctgaccaaccttctgcccagtaccacctacacagtctctatgcacgcc
accaatgggcctctcaccagccagaccatcagcaccaactttacaactcttttggatcct
ccaacaaatctgactgcaagcgaagtcactcgacggagtgccctgctctcctgggtgcct
cccatgggagagatcgagaactacgtcatgacctacagatccaccgatggcagccggaag
gagctgattgtggatgccgaggacacgtggatccgcctggaggggctttccgagaccaca
gagtacaccgtgcacctgcaagctgcccaaaatgccatgcgcagcggcttcatctctacc
accttcaccacaggcggacgtgtctttgctaatcctcaggactgcgcccagcacctgatg
aatggagacacactgagcggcatctacaccatctccatcaacggggacctcagccagcga
gtgcaggtgtactgcgacatgaccaccgatggaggtggctggattgtcttccagaggcga
cagaatgggctgaccgacttcttccggaaatgggcagattaccgggttggcttcggaaac
ttggaggatgagttttggctgggcttggacaacatccacaagatcacgtcccaggggcgc
tatgagttgcgaatagacatgagggatggccaggaagcggcgtacgcctactacgacaag
ttctccattggcgactcccgcagcctgtacaagctgcgaatcggggactacaatggcact
tcaggggactccctcacctatcaccagggccgccccttctccaccaaggacagggacaat
gatgtcgctgtgaccaactgtgccatgtcctacaaaggagcctggtggtataagaactgc
caccgcaccaacctcaatggcaagtacggagagtcccggcacagtcaggggattaactgg
taccattggaaaggccatgagttctccattcccttcgtggaaatgaagatgagaccttac
aaccaccataacatctctgggaggaagcgacggtccctacagctctga
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