Ciconia boyciana (Oriental stork): 140654403
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Entry
140654403 CDS
T10948
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
cboy Ciconia boyciana (Oriental stork)
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cboy03036
]
140654403 (HFM1)
Enzymes [BR:
cboy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
140654403 (HFM1)
Chromosome and associated proteins [BR:
cboy03036
]
Eukaryotic type
Meiosis-specific proteins
Others
140654403 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
140654403
NCBI-ProteinID:
XP_072723745
LinkDB
All DBs
Position
7:complement(19047898..19088146)
Genome browser
AA seq
1443 aa
AA seq
DB search
MFNSADMVFSLDNLFYERPDTRQRYLENEEPKIWCIAPAPAIAEIPAAEELQRELEKNTD
NTHMGGRKHQNFIQQCKSNTEEVNDKSPAPVHFGIASEKEVLQLSVGEREQISFRHESLK
MVSLFLSSDQDKSKTGTALSQQPGANFLQSKILSNFPENGDDESVHSTLRKSLFKMSGCM
YKNTEFKDSSMDVKEIDTYLNTSENMKEMRKEGLRRNNHHAPMTKDSDFTLHRVNDGDIA
SKNGIKMKSFSNASEILDMTGTTGRKLEILRAVTEIPTQFRSIFKEFPYFNYAQSKALDD
LLYTDRNFVICAPTGSGKTVMFELAITRLLMEAPLPWLNIKVVYMAPIKALCSQRFDDWK
EKFGPIGLSCKELTGDTVMDDLFEIHHAHIIITTPEKWDSMTRRWRDNSLVQLVRLFLID
EVHVIKDESRGATLEVVVSRMKTVQSSLWRHLENQDTVPPLRFVAVSATIPNAEDIAEWL
SDSKMPAVCLKIDEDQRPVKLRKIVLGFPCSDNQTEFKFDLTLNYKIASIIQTYSEQKPA
LVFCATRKGVQQAASVLAKDAKFLLSIEQKQRLQRSANSLKDSKLRDLLMYGVAYHHAGM
EISDRKIIEGAFTIGDLPVLFTTSTLAVGVNLPAHLVVIKSTMHYAGGVFQEYSETDILQ
MIGRAGRPQFDTTATAVIMTRWSTREKYIQMLNGADIIESSLHRHLVEHLNAEIVLHTVT
DVTVALEWIRSTFLYIRALKNPTHYGFSSGLNKIGIEAKLQELCLKNLNDLSSFDLIRMD
EANFKPTETGRLMAWYYIAFDTVKQFFTIKGTETLNELITMISNCTEFLDVKLRTNEKKI
LNTLNKDKDKITIRFPMEGKIKTREMKINCLIQAQLGCIPIQDFTLTQDTGRIFRNGLRV
TRWLSDFLASHKNNFSALLNSLILAKCFRCKLWENSLHVSKQLEKIGVSLSNAMVNAGLT
SFKKIEDTNARELELILNRHPPFGNQIKESVLHLPKYELEIEQLPKYSDTLAEILVTIKL
TNYEQLQTKRTATDFHYVTLVIGDADNQVIFNQKIMDSVLLKTGNWTKKIEVKRALKSED
ISINLISSDYVGLDIQQAYTAFYLTLTTVGSKVVTNQKLKAESSLDMCYGSPQSLPAAKV
DTGGRSKQEITYKKYGNRECNHRCKNKDVCGHDCCKTGVPPKSEMNGDSKFSLYLADLRS
RNSISSVPPVKRLKMQMLNQAQNVDLKQFVFTPKSLLPALPRCRNKQSSSSPSPSVDQVD
NVNSLGGSQKQLQSWNYGKSNALDMDFELRDDVWDDIDDEKLIFASNFASRELDECEPLC
QYTRSKATNDISKDLSTLQEETGIQNSVVSVVNSTSKVNLSVQSGNINMFSFQGKKHSNP
SQELENIQCSSISKIISDSSKFTRKEDFFIFTKEQEKEVDARYLLDDEINDVKPFLGIFD
GIL
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactctgcagacatggtcttttcattggataatttattttatgaaagaccagat
acaagacaaaggtatctagaaaatgaagagcctaagatttggtgtattgcacctgctcca
gctattgctgaaattccagctgcagaggagttacagagggaactggaaaagaacacagac
aacactcatatgggagggagaaagcaccagaattttatacaacagtgtaagagtaacact
gaggaagtaaatgataaatcaccagcacctgttcattttggcatagcctctgaaaaagaa
gtgctccaattaagtgtaggagaaagagagcaaattagttttcggcatgaaagtctgaaa
atggtttcattgtttctctcttctgaccaagataaatccaaaacaggaacagcgctttct
cagcaacctggcgcaaattttttacaaagtaaaatattaagtaattttccagaaaacggt
gatgatgagagtgtccattcaacactaagaaaaagcttatttaaaatgtctggttgtatg
tataaaaatacagaatttaaagatagttctatggatgtgaaagaaattgatacttactta
aatacaagtgaaaacatgaaagaaatgagaaaagaaggtttacggagaaataatcatcat
gctccaatgactaaagactcagattttactttgcatagggtaaatgatggggacattgca
tctaaaaatggaattaaaatgaaatcattttctaatgcttcagagattctggatatgaca
ggaactacaggaagaaaactggaaattttgagggctgttacagaaataccaacccaattt
agaagtatttttaaggagttcccatattttaactatgcacagtcaaaagctttggatgat
cttctttatacagataggaattttgtgatttgcgctccgactggctctggaaaaactgta
atgttcgagctagctattaccagattactcatggaagccccactgccttggttaaatatt
aaagttgtttacatggctccaataaaagctctatgcagtcagcgttttgatgattggaaa
gaaaaatttggacctataggactcagctgcaaggaactgacaggagatacagtgatggat
gatttatttgaaatacatcatgctcacattattatcactacacctgaaaaatgggatagc
atgacgagaaggtggagagacaactctctagtccagcttgtacggctgtttctcattgat
gaggtgcatgttataaaggatgaaagccgtggtgcaacattagaagttgtagtcagtcgg
atgaagactgttcagtcttctctttggcgtcatttagagaatcaggacactgttcctccc
ttgagatttgtagctgtttctgcaacaatcccgaatgctgaagatattgcagaatggctt
tcagatagtaagatgcctgctgtatgtctgaaaatagatgaggatcaacgaccagtgaag
ctacgcaaaattgttcttggttttccttgcagtgacaatcagacagaattcaaatttgac
ttaactcttaactacaagatagctagtattatacaaacatactcggaacaaaaaccagca
cttgtgttttgtgccacaagaaaaggagtacagcaggctgcttctgtccttgcaaaagat
gctaaatttctactgagtatagaacagaaacaaaggttacagaggtctgcaaattcattg
aaagattccaaactgagagatcttttaatgtatggtgtggcttatcatcatgcgggcatg
gagatatctgacagaaaaataattgaaggagcttttactataggagacttaccagtactt
tttactactagcaccttagctgtgggagtcaatctacctgcacacctggtggttataaaa
tccacaatgcactatgctggaggagtgttccaagagtacagtgaaactgacattctgcaa
atgattgggagagcaggaaggcctcaatttgacactacagctacagcagttattatgacc
cgttggagtacaagggagaagtatatacagatgttaaatggtgctgatataatagagagc
agcttgcacaggcatcttgttgagcacttaaatgcagaaatagtgctacatactgtcaca
gatgtcactgtagctttggaatggatacgatcaacattcttgtacattagagccttaaaa
aatccaactcattatggtttttcatctggattgaataaaattggaattgaagcaaaatta
caagagctgtgtttgaagaacttaaatgatttatcatcttttgatttgatcaggatggat
gaagcaaatttcaaaccaacagagactggaagattaatggcgtggtattatattgcattt
gatacagtgaaacaatttttcacaattaagggaacagagactttaaatgaattgattaca
atgatctccaactgtacagaatttctggatgtcaagttaagaacaaatgaaaagaaaata
ctgaacactttgaataaagacaaggataaaataactataaggtttccaatggaggggaag
ataaaaacaagagaaatgaaaataaactgtcttattcaggctcagctaggatgcattcct
attcaagactttactttgacacaagatactggaagaatatttagaaatggcttaagagtt
actagatggttatctgactttctggcatcacataagaacaacttttctgctttattaaac
tctttgattttagcaaagtgtttcaggtgcaaactttgggaaaattcacttcatgtgtct
aaacaattggaaaaaattggtgtatcgctgtcaaatgctatggtaaatgctgggctgact
tcatttaaaaaaatagaagacacaaatgcaagggaacttgaattgattttaaacagacat
cctccttttggaaaccagataaaagaatctgttttgcaccttccaaaatatgaacttgaa
attgaacagcttccaaaatacagtgatacattggctgaaatcttagtaaccatcaaatta
acgaactatgagcagctacagacaaagagaacagcgacagactttcactatgttacattg
gtcataggagatgctgacaaccaagtcatttttaatcagaaaattatggattctgtgctg
ctgaaaactggaaattggacgaagaaaattgaagtgaaaagagctcttaaatctgaggac
attagtataaatttaattagttctgattatgtgggccttgatatacagcaagcatataca
gccttttacttaacactgacaacagtgggaagtaaagtggttacaaatcaaaaactgaaa
gctgagtcttcacttgatatgtgttatggctcaccacaaagtctgccagcagcaaaagta
gatacaggaggcagatctaaacaagagattacctacaagaaatatgggaacagagaatgc
aaccatcgctgtaaaaataaagatgtgtgtggacatgactgctgtaaaactggagtacct
ccaaagtctgagatgaatggagattcaaagttttctttgtacctagctgatttaaggagc
aggaactcaatttcttctgtacccccagtaaaacggttaaagatgcagatgttaaatcaa
gctcaaaatgtggatctcaaacaatttgtttttacacctaaatctttgttgccggcattg
ccaaggtgtagaaataaacagtcgtcttcatcaccatcaccttcagtggaccaggtagat
aatgttaatagcttaggaggatctcagaaacaactgcaatcctggaattatggaaagagt
aatgctttggatatggattttgaactgagagatgatgtttgggatgatattgatgacgag
aaattaatatttgctagcaactttgccagtagagaattagatgagtgtgaaccactttgc
cagtatacaagaagcaaagccacaaatgacatttcaaaagatttaagcacgttacaagag
gagaccggtattcagaactcagttgtttctgtggttaatagcacatcaaaagtaaattta
tctgtacagagtggaaatataaatatgttcagttttcaagggaaaaagcattcaaatcct
tcacaagagctggaaaacatacagtgttcttcgatctcaaaaataatctcagactcttct
aaatttactaggaaagaggatttttttattttcacaaaagaacaggaaaaagaagtggat
gccaggtatcttcttgatgatgaaatcaatgatgtcaagccctttcttggaatatttgat
ggtattttgtaa
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