Ciconia boyciana (Oriental stork): 140655135
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Entry
140655135 CDS
T10948
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
cboy Ciconia boyciana (Oriental stork)
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cboy03009
]
140655135 (PDCD11)
Ribosome biogenesis [BR:
cboy03009
]
Eukaryotic type
90S particles
Other 90S particles
140655135 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_Syf1_CNRKL1_N
OB_RRP5_4th
HAT_PRP39_N
Suf
OB_RRP5
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_15
ARM_TT21_5th
ARM_TT21
TPR_CcmH_CycH
TPR_16
TPR_12
Motif
Other DBs
NCBI-GeneID:
140655135
NCBI-ProteinID:
XP_072725271
LinkDB
All DBs
Position
8:52665474..52694766
Genome browser
AA seq
1838 aa
AA seq
DB search
MASMEENFPRGGIQKKPTEGKTPNPKLERDNLFDIHHEEQSQKRKRSQREQGKQKKFKAD
KIVAAKDNVVNIEPLTIETLCEGMLLLGCIKEVSDYELVISLPNGLSGFVPVTQISDAYS
KMLSKQVAQGELLEDLNSLSDMYSPGTLVRCIVTSVEKSADGRRSIKLSIDPKKVNKGLN
ASALASGMLLSGFVSSVEDHGYLIDIGVSGTHAFLPRQKAQNYIKAVKRGPDLKIGQNLN
CVIVEVKNEGRVVRLSIDRSEVAASLATERQNWTLSNLLPGLVVKARVQKVAPLGIKVSF
LSSFTGIVDFMHIDPEKSMNCSPDQVVKACILSIHPTSKVVRLTLRQAFLHPGGSPNQLS
NDRMGAVVEESTVKAFYKQFGAIFELDDGTLAFARLKHLSKTRKSFKPGAFKTGCKHKCR
IIDYSLMDEMCIVSLKYQIIEARFLQYQDIHTGDVVQGKVFALKPIGMQVKVTDGIKGLV
PSMHLADVILKQPEKKYNIGDEVKCRVLECNPAGKKLILTLKKSLVQSKLPVLSNYEDAK
PGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELSSEPISCPDKVFHEGQVVKVMVLKCE
PQQERLLLSFRLSGKPAPEDKKECTPKKKQEVKYQIGEMVDVKVLKKKDNGLEVSVLEDE
GNVIASIPTVHLSDFVTNCKLLWHCLQEGDVLPRVMCLSDKGEHIILSRKSAVISAVQEE
QVVRSFSEIQPGMLLTGYVRNVMPFGVFVEFPFGVTGLAPKVTMSDKFVTDTKDHFVVGQ
TVIAKVMSIDEEKQRVLLNLKVSECSSGDSAAESFALLNQYFKEMKEIRSLLRRRGEPSM
ARGLCELVPGKELQLVMQGVKEDGSALFSGSYVTGLTVTATRYHLGDKNIVPGEKTKALV
LHVDALTSKVYVSLREELLKQRAKQRLTENSQHSAVVQHIAEEFAVVSLLETGQLAAIPI
ASHFNDTFRFDSEKLKVGQTITATLKVVKVNDHGVLLAVQGPAKKNVFVRVRNESETVLE
EMLAAVKHSLSLGDIVTGTVKSVKPTHVTVAIDDKLTGSIHASRILDEVPIGSFPAYTLK
TGQKVTARVIGGRDVNTHRYLPITHPHFTQSIPELSIRPSEIEGKVTAMLNLKEDSALKK
LGLYNAGQTVTCFVKKYNILKNWLEVEVTPDIRGRVPHLLLSLNTRVLKHPEKSFKNGQA
ISATVTGTDVTETNLCLSLTGIQSLEQGTITVGMVTKVTPHIGLTIALPGGKTGKVSIFH
LNDTYMENPLGDFKVGKIVRCYILSNENGKIQLSLRQSRLNPKSNSKVEDVEITCIKDVK
KGQLVRGYVKSITPSGVFFGLSTSLLGRILFQNVSPYFVQKHSLYEKYLPEGKLLTAKVL
GVNGKEKHIELSLLPEDTGMPSVLPESLGLPRYDAEEEKREADDREKREELKLKTKRRRG
NSENEQEAKPKKRKICSAEENDSGIEVYYREEEDDDQEEEAAKKKSQIRKPGEAPRLQVS
MGFTWDEDMNAMDIPVLNQKEESSESEEEEDLQSKLKKQTKKEKELEKQKKEKELCKLEA
ALMDPSRQPQSADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTICFRE
EQEKLNVWVALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDIYANSEKYKQAEEL
YHTMLKRFRQEKSVWLKYASFLLKQGQTEATHRLLERALKALPTKEHVDVISRFAQLEFR
FGDPEHAKALFESTLNSYPKRTDIWSIYMDIMIKHGSQKEVRDIFERVIHLSLAPKKMKF
FFKRYLDYEKKFGTTESVLAVKRAALEYVETKSSLADT
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatggaagaaaactttcctcgagggggcatccagaaaaaacccacagaggga
aaaacccccaacccaaagttagagcgggacaatttgtttgatattcaccatgaagaacaa
tcccagaaaagaaaaaggagccaaagggagcaaggaaagcagaaaaagttcaaggcagac
aaaatagttgctgctaaagacaacgttgtgaatattgaaccactcacaattgagacgctc
tgtgaggggatgctgctccttggttgtataaaagaggtcagtgactacgagctagtcatc
agcttgcccaatggactttcaggatttgtgccagtcacgcagatcagcgatgcctacagc
aaaatgctgagcaagcaggtggcccaaggagaactcctggaggacttgaattcgctctcg
gacatgtattctccagggacactggtcaggtgcattgtaaccagtgttgagaaaagtgct
gacggacgtcggagtatcaaattatcgatcgaccccaagaaggtcaataagggtctgaat
gcttcagcactagcatcgggcatgctgctctctggctttgtgtctagtgtggaagaccat
ggttacctcattgatattggagtcagtgggactcatgcttttctgcctcgtcagaaagcc
caaaattacatcaaagcagtcaagagagggcctgacttgaaaataggccagaacctgaac
tgtgtcattgtggaagtaaagaacgagggaagagtggtccgtttgtccattgatcgatca
gaggttgctgcatcccttgcaacagagcgacagaactggaccctctctaatttattacca
gggctggtggtgaaggctcgagtgcagaaggtggccccactcgggatcaaagtgagcttt
ctgtcttccttcactggcattgtggatttcatgcacatagacccagagaaatccatgaac
tgttctccagatcaagtggtgaaagcttgcatcctctctattcatcccacctccaaggtg
gtgcggcttactctacggcaggccttcctccaccctgggggatccccaaaccagctctcc
aatgatcgcatgggggcagtggtggaagagtcgacagtgaaagctttctacaagcagttt
ggtgccatctttgagctcgatgatggcactcttgcatttgcacggttgaaacatctttca
aaaaccagaaaatcctttaaacctggggcatttaagacaggatgcaaacataaatgtcgg
atcattgactacagcctgatggatgagatgtgtattgtatctctgaagtatcagattatt
gaagcgcggtttctgcaataccaagatatccacacaggggatgtggtgcagggcaaagtg
tttgcattgaaacccattgggatgcaagtgaaagtgactgatgggattaaagggctcgtg
ccgtccatgcatcttgctgatgtgatcctgaagcagcctgagaagaagtacaacatagga
gatgaagtcaaatgtcgggtgctagagtgcaatcctgcaggaaagaagctgatccttact
ctaaagaaaagtcttgtccagtcaaagcttccagtcctctccaattatgaagatgcaaaa
ccaggtctgatcacacatggctttgtggtgtgtgcaagggagtttggctgtattgtgaag
ttctacaatgatgtcaaaggtctggtacccaagaatgagctgagctcagaacccatatct
tgtccagataaagtcttccatgaaggccaggttgttaaagtaatggtcttaaaatgtgag
ccccagcaggaaagactcctgttgtccttcaggttatcaggcaagcctgccccagaggac
aaaaaggaatgtacgccaaagaagaaacaggaagtgaaataccaaataggagagatggtt
gatgtgaaagtcttgaagaagaaagataatgggctagaggtttctgtcttagaagatgaa
ggcaatgtgatagcctcgattcccacagttcacctctctgactttgttactaactgcaag
ctcctgtggcattgtcttcaagagggagatgtcctgcccagagttatgtgcctaagtgac
aagggagagcacatcatcttaagcagaaagtctgcagtgatttctgctgtacaggaggag
caagttgtgagaagtttctctgaaatccagcctgggatgctgttgactggttacgtgaga
aatgtgatgccctttggagtttttgtggagttcccttttggtgtgacaggactggcgccc
aaagtgaccatgagtgacaagtttgtgacggacaccaaggaccactttgtggtgggacag
actgtgattgcgaaggtgatgagcattgatgaggagaagcagcgtgtgctcctcaatctg
aaggtgtcagagtgcagctcaggcgattctgctgcagagagctttgccctgctgaatcaa
tatttcaaggagatgaaagaaatcaggagcttattgagaagaagaggggagcccagcatg
gcccgaggcctttgtgagttggtgcctgggaaggagctgcagctggtcatgcagggtgtg
aaggaggatggctcagcgctgttcagtggcagctatgtcacaggcttgactgtaacagcc
actcgataccatttgggagataaaaatattgttcctggtgagaaaacaaaggcattggtt
cttcatgtggatgccctcacatccaaagtgtatgtttcccttcgggaagaactgttaaaa
caaagagccaagcaacggctcacagagaattcccagcactctgccgtcgtgcagcacata
gcagaagagtttgccgtcgtgtctttgttggaaacaggccagctggcagctatccccata
gcctctcacttcaatgacaccttccgctttgactcagaaaaactgaaggtgggacaaaca
atcactgcaaccttaaaagtagtgaaggtgaatgaccacggagtcttgttagcagtacaa
ggcccagcaaagaagaatgtttttgtaagggtccggaatgaatctgagacagtgttagaa
gagatgcttgctgctgtgaaacactcgctttccctgggggatattgttactggtactgtt
aaatctgtcaaaccaacccacgtcacagttgctattgatgacaagttgacaggttcaatc
catgcatcccgaattctggatgaagtgcccataggctcttttccagcgtataccctgaaa
actggacagaaggtgactgcccgagtcattggaggcagagatgtgaatactcacaggtac
ctgcccatcacccatccgcacttcacacagtccattccagagctcagcattcgaccaagt
gaaatagaagggaaagtcacagcaatgctgaaccttaaagaagacagtgccctcaagaaa
cttggactctacaacgctggacagacagttacctgttttgtgaaaaagtataacatcctc
aaaaattggctggaggtagaagtcacccctgacattcgaggaagagttcctcatctgctg
ctgtctctgaacaccagggtcttaaaacatccagaaaagagcttcaaaaatggccaggca
atatcagctacagtgactggaacagatgtcaccgaaacaaacctctgcttgtcactcaca
ggaattcagtcactggagcagggcaccatcactgtaggcatggtaacaaaggtgactcca
cacattggtttgaccattgcgctgccaggtgggaagactggcaaagtcagcatctttcac
ctgaatgatacttacatggagaatcctctgggcgacttcaaagttggcaagattgtcagg
tgttacatcctctccaatgagaatggcaaaatccagttatctctccggcaatcccggcta
aacccaaagagcaacagcaaagtggaggatgttgaaataacatgtattaaggatgttaaa
aaaggccagctagtgagaggctatgtcaaatcaatcactccatcaggtgtattctttggc
ttgtccacttcacttttgggccgaatcttgttccagaatgtttccccttattttgtacag
aaacactccttatatgaaaagtacctgcctgaaggaaagctgctcactgccaaggtgctt
ggtgtaaatggaaaagaaaaacatattgagctctctctcctgcccgaggacactgggatg
ccaagtgtcttgcctgaatccttaggcctaccacgatatgatgcagaggaagagaaaaga
gaggcagatgatagggaaaagagggaagagcttaagctgaagacaaaacggagaagagga
aactctgaaaatgagcaggaggctaagccgaaaaagaggaagatctgctcagcagaggaa
aatgacagtggaattgaggtatattaccgggaggaggaggatgatgaccaggaggaagag
gcagctaaaaagaaatctcagataaggaaacctggtgaagctcccaggctgcaagtatcc
atgggcttcacctgggatgaagacatgaatgcaatggatatacctgtgctgaatcagaaa
gaagagagctcagagagcgaggaggaggaggatctgcagtcgaagctgaagaaacaaaca
aagaaagagaaggagctagagaagcagaaaaaagagaaggagctctgcaaattagaggca
gccttgatggatcccagtcgacagccccagtcagcagatgactttgaccgcctggtgctg
agcagtcccaacagctccatcctctggctacagtacatggctttccacctccaggctact
gagattgagaaggccagagctgtggcagagagagcacttaaaacaatctgcttcagggaa
gaacaggagaagctgaatgtctgggtagctctgctgaacttggagaacatgtatggtact
gaggagacactgatgaaggtctttgagagagctgttcaatacaatgaacctttgaaagtc
ttccagcatctgtgcgacatctatgccaattctgagaagtacaagcaagcagaagaattg
taccacacaatgttgaagcgtttccgtcaggagaaatctgtgtggctgaaatatgcctct
ttcctcctgaagcaaggccagactgaggctacacacaggcttttggagcgtgctctcaag
gctttgcccaccaaagaacatgtggatgtaatttcaagatttgcacagctggagttccgt
tttggggacccagaacatgccaaggccctctttgagagcaccctcaacagctatcccaag
cggacagacatctggtccatctacatggacatcatgatcaaacatggcagccagaaggaa
gtacgggacatctttgagagggtcatacacctgagcttggcaccaaagaagatgaaattc
ttctttaaacgctatctggattatgagaagaaatttggtacaacagaaagtgtcctcgct
gttaaaagagcagcacttgagtatgtggagaccaagagttctcttgctgacacctaa
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