Ciconia boyciana (Oriental stork): 140655157
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Entry
140655157 CDS
T10948
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140655157 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cboy03021
]
140655157 (TAF5)
03036 Chromosome and associated proteins [BR:
cboy03036
]
140655157 (TAF5)
Transcription machinery [BR:
cboy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140655157 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
140655157 (TAF5)
Chromosome and associated proteins [BR:
cboy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
140655157 (TAF5)
STAGA complex
140655157 (TAF5)
TFTC complex
140655157 (TAF5)
SAGA complex
140655157 (TAF5)
SLIK complex
140655157 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
Tricorn_2nd
PEP5_VPS11_N
CDK5RAP3
Beta-prop_ACSF4
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
140655157
NCBI-ProteinID:
XP_072725319
LinkDB
All DBs
Position
8:52648414..52660871
Genome browser
AA seq
791 aa
AA seq
DB search
MAALPEEPAEVAAVKPDPEAGTPPQPPAAPPAAPPAAAAAPAAPPAAAAEGEAAGSGGEA
APPKPAAPGPAASPAALDRQTLVAVLQFLRRSNLRESEEILRREARLLGDDLGAAALSPA
GAGLLGAPGGDADSAGGEALLSRVTAAAAITIGGSAATVSSSSPGVAAVAAVPPGKVGGG
VVVEDQPDVSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYL
ELVYNQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRI
SRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANK
AKVFFGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSVGSKSKKQDPNAPPQNRIPL
PELKDSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGF
ADSTVRVWSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGT
SFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVA
RLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTIRLWDVLNGNCVRIFTGHK
GPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASG
SMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRN
LLLAAGAYSSQ
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactacctgaggagccggcggaggtggcggcggtaaagccggaccctgaggcg
gggacgccgccgcagccccctgctgctcctccagccgctcctccagccgccgccgccgcc
cccgccgctcccccagctgcggcggcggagggggaggcggcggggagcggtggggaggcg
gcgccccctaagcctgcggcaccgggcccggccgcctccccggcggctctggaccggcag
acgctcgtggccgtgctgcagttcctgcggcgcagcaacctccgcgagtccgaggagatc
ctgcgccgcgaagcccgcctgctcggcgacgacctcggcgctgctgccctcagccctgcc
ggcgccgggcttctgggagccccgggcggcgatgcggactccgccggcggcgaggcgctg
ctcagccgggtcaccgccgctgccgccatcacgataggaggcagcgccgccactgtctcc
tcttccagccccggggtggcggcggtcgccgctgtgccgccagggaaagttggaggaggc
gttgttgtggaagatcagccagatgtgagtgcagtattgtctgcctacaatcaacagggg
gacccaacactgtacgaggaatactacagtggattaaaacacttcattgagtgttccctg
gactgtcatcgagcggaattgtctcagctgttttatcctctctttgtgcacatgtacttg
gaattggtctacaatcaacatgagagtgaagcaaagtctttttttgaaagatttcatggg
gatcaggagtgctattaccaggatgacctgcgtgtattatctagcttaaccaaaaaagaa
catatgaaaggtaacgagaccatgctggatttccgaacaagcaagtttgtgctgcgtatt
tcccgtgactcttaccaactcttgaagaggcatcttcaggaaaagcagaacaatcagatc
tggaacattgttcaggaacatctttacattgatatctttgatggaatgcctcgcagtaaa
caacagatagatgctatggttggaagcttggctggggaggcaaaacgagaggctaataaa
gcaaaggttttctttggcttactgaaagaaccagagtttgatgtgcctttggatgatgaa
gatgaagaaggagaaaatgaggaaggaaagccaaagaagaaaaaacctaaaaaagatagt
gtagggtcaaaaagtaaaaaacaagaccctaatgctcctccccaaaacagaattcctctg
cctgaactgaaagactctgacaagctggataaagtaatgaatatgaaggaagctgcaaga
cgtgtgcgtcttggcccagagtgcctaccctccatctgtttctacacgttccttaatgct
taccagggtctgactgcggtggatattacagatgactctagcatgattgtaggaggcttt
gctgactctactgtcagagtgtggtctgtgactccgaaaaagctacgtagtgtgaaaaca
gcagcagacctcagtctcattgacaaagaatcagacgatgtcttggagaggatcatggat
gagaagacagcaagtgagttgaagattttatatggtcacagtggacctgtctatggcacc
agcttcagtcctgataggaattatctgttgtcctgttctgaggatggcactgtcagattg
tggagtctccaaacgttcacgtgtttggtgggatataaaggacacaactatccagtatgg
gatacacaattctctccttatggttattactttgtgtcagggggacatgacagagtggct
cgtctgtgggcaacggatcactaccaacctttacggatatttgctggccatcttgctgat
gtgacgtgtacccgatttcatccgaactccaactatattgccacaggctcggcagacagg
actatacggctctgggatgttttgaacgggaattgtgtaagaatattcactggacataag
ggaccaattcattcattggcattttctcctaatggacgattcctggctactggagcgaca
gatggaagagttctgctgtgggatattggacatggcttgatggttggagaattgaaaggg
cacactgacactatctacgcgctcagattcagtagagatggggagattttagcatcaggt
tcaatggataacacagttcgtctgtgggatgctgtgaaggcatttgaagatttagaaact
gatgactttactacagccactggacatataaacttgcctgaaaactcccaagacttgtta
ctaggtacatacatgaccaaatcaacccccgttgtacacctccattttacacgcagaaac
ttgctgctggctgcgggagcctacagttcacagtaa
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