Ciconia boyciana (Oriental stork): 140655487
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Entry
140655487 CDS
T10948
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
140655487 (COL17A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
DUF5006
DUF4869
Motif
Other DBs
NCBI-GeneID:
140655487
NCBI-ProteinID:
XP_072726219
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Position
8:complement(53290829..53357101)
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AA seq
1515 aa
AA seq
DB search
MDSVTKKTRQDGSEVTERLITETVTTRLTSLPPKGGSSSGLKTSSHTGGSGVEKRSYTHG
SSYVTSSGSGRLNSASSSSGYRQTQSPSSTLTKSPGSTFERKTYVNRHATYEGSSSANSS
PEFPRKEFASASTRGRSQSRESEIRVRLQSASPSGRWTELDDVKRLLKGSRSASCSPTRS
PSNTLPIPKKAVVETKMVTESSQSVSGTYDTTILNAALPSYMWSSTLPAGSSLGGYHNSS
SLINAMSHSTGSVFGVPNNLAPSNHTLNAGLSTSSTVFGVQNNLSPSSSTLTQNATAASA
AYGMKNTSQSNTMASTGVSASAGGTVLSSQGDDILRKDCKFLLLEKENAPAKKEMELLIM
TKDSGKVFSASTTGLNGGSFVEDTLKKEKQGFSSSYATDTGLKSDANGGLKSVPTRDKAT
YAEIRNGDAAGAIGSAPSWCPCGSCCSWWKWLLGLLLAWLLLLGLLFGLIALAEEVRKLK
SRVENLEKINGGLLTINQGNSNIEKDVSRVDFLHGISPSSTFPYEESVWLMVKNRLNQEV
ERGYFRGERGEPGEKGDMGMQGPRGERGLPGVPGIPGPIGHQGPEGPKGQKGSMGDPGME
GPMGQRGREGLPGPRGEPGPPGFGEKGDRGGVGEPGPPGPPGPPGSAGLKGLMGSPGPQG
PPGPPGLQGFRGEAGLPGAKGEKGATGAPGPKGDQGEKGSRGMTGEQGLRGMPGPPGEPG
AKGPVGQAGRDGQPGEKGDPGLMGMPGARGPPGPSGDAGQPGLTGPQGPPGLPGNPGRPG
AKGEPGAPGKVISAEGSSTIALPGPPGPPGPAGPTGPPGVPGPVGPAGLPGQQGPRGEKG
SPGEAVIETIKTEVSSLTSQMLADLQGRAGPPGPPGPPGESVQGPPGPRGPPGEGLPGPP
GPPGRPGSSMSTSETFFTGPPGPPGPPGPKGDRGEQGPRGFTGEPGEPGLSAFSSHGDRV
TMQGPPGVPGPPGPPGPKGDAGVPGAPGIPGASRGGSRQIQGPPGPPGPPGPPGPGGSSS
QEIQQYVTDYLKSDNVRHYLAGAQGPPGPPGPPGVITTADGMNLDYAELATRVMNYMTSS
SDRYQSFASSVSTTSILYQELLDMLQREEIRQYLIGPRGPPGPPGPGGDGMSLSLDYDEL
TRRFISYLTSSGMSIGLPGPPGPPGTPGISYSDLTAYLRNSEFSGLVGPPGPAGPPGPPG
IPGSPGTSLEDISSYLQSVGYSSLSGVQGPPGPPGPPGPPGFSGTGLLSYADITHSDEFR
SELIQYLKSDEVRSYISGPPGPPGPRGPPGPKGDSGLVSGSMSASYQGLRNSEQLHGGSL
GAEGSHGGSLGTGSSYGSSMSSMSSYSASLGSDGSYDTSMGSDRSFDALLTEEESHRSAG
SSRSYSSSFTGSLDYNELALRVSENLQSRGILQDLMSYTAQGPAGPPGPPGPPGISRVFA
AYGNVTEDLMDFFRTYGTIQGPPGEKGERGYPGPKGDPGPMGPPGRHGHRGPKGEKGEKG
EQVYVGRRKRRSVGV
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtaacaaagaaaacgaggcaagatggatcagaagttactgaaagacttatt
acagagactgtaaccacaagactgacatccttaccacccaaaggagggagcagcagtgga
ctcaaaacatcatcccacactggagggagcggagtggaaaagaggtcttacacccatggc
agcagctatgtgacttcaagtggaagtggtagactgaattcagcatcatcatcttctgga
tatagacaaacccagtctcccagctctactctcaccaaatcacctggctcaacatttgaa
agaaaaacctatgtcaaccgccatgcaacatatgaagggagctccagtgccaactcttct
cctgagttccccagaaaagagtttgcatctgcctccacaagagggagaagccaaagtcga
gagagtgaaatacgagtccgactgcagagcgcatctccctctggcagatggacagagttg
gatgatgtgaaacgtttgctgaaaggaagtcgatcagccagctgcagccctactcgatcg
ccgtcaaatacactcccgataccaaaaaaggctgtggtggagacaaagatggttactgag
agctctcagtcagtgtcggggacatatgatacaaccatactgaatgccgccctcccttca
tacatgtggtcctccactctgcctgctgggtcttcccttggaggataccataacagctct
tccttgatcaatgctatgtctcactctacaggatcagtttttggtgttccaaataacctg
gctcccagcaatcatactctgaacgcaggcctgagcacttcctctacagtgtttggagtt
caaaacaacctgtctccaagctcttcaaccctgacccagaatgctactgcagcctccgca
gcatatgggatgaagaacacttctcagagcaacaccatggcaagtactggtgtgtctgcc
tcagcagggggaactgttctgagctcccagggagatgacattctgcgcaaagactgcaag
ttcctgctgctggagaaggagaacgccccagcaaagaaggagatggagctcttgatcatg
acaaaggacagtggcaaagtctttagtgcctctaccactgggcttaatggaggatccttt
gtagaagacaccttgaagaaagagaagcagggattttcctcctcttatgctacagatact
ggcctaaaatcagatgcaaatggaggactgaaatctgtgccgacaagggacaaagcaact
tacgcagaaatacgaaatggtgatgcagcgggtgcaatcggatcagcaccatcctggtgt
ccctgtggttcctgctgtagctggtggaaatggctcctgggtttgcttctggcctggttg
cttctccttggattgctttttggactcattgctctggcggaagaagtgagaaagctgaaa
tctcgtgtggaaaacctggaaaaaatcaatggcggcctcctgacaattaaccaagggaat
tcaaatatagaaaaggatgtttcaagagtagactttcttcatggtatttcaccctcctca
accttcccttatgaagagtcagtttggttgatggtgaagaacagactgaaccaggaagta
gaacgaggctacttccgaggggagagaggagaacctggtgagaaaggtgacatgggaatg
caaggtcccagaggagagcgaggacttcctggtgtcccaggcattcctggtccaattggg
caccaaggaccagagggaccaaaaggacagaaaggcagcatgggtgatcctggcatggaa
ggtcccatgggacaaagaggtcgagaagggctaccagggcctcgaggggagcctggacca
cctggatttggagaaaaaggagacagaggtggtgttggtgagccaggtcctccagggcca
cctggtcccccaggttctgctggccttaaaggtctgatgggttctccaggcccacaaggt
cctccaggtcctcctggcctacaaggatttagaggagaagcaggtctcccaggtgctaaa
ggtgagaaaggagccactggagcccctggacccaaaggcgatcagggtgagaagggttct
cgtggaatgacaggtgaacaaggcttaagaggaatgcctggtcctccaggagagccaggg
gctaaaggacctgtaggacaagctggccgtgatggacagccaggtgaaaaaggtgaccca
ggtcttatgggaatgccaggagcccgaggccctccaggaccctctggagatgcaggacag
ccaggtctcacaggaccccaaggaccgccaggacttccaggcaacccaggccgaccaggg
gctaaaggagaacctggagctccaggaaaagttataagtgctgagggttcgtcaactatt
gctctgccaggcccaccaggtcccccaggcccagctggccccactggacccccaggtgtt
ccaggtcctgttggaccagctggtctccctggacagcaaggtccacggggcgagaaggga
tccccaggtgaagctgtgatagaaactatcaaaacagaagtctcatcgttaacatctcaa
atgctggcagatttacaagggcgagcaggaccaccaggtccccctggaccaccaggtgaa
tctgtgcagggaccccctggacctcgtggccccccaggagaaggattgccaggacctcca
ggtccaccagggagaccaggatcttccatgtccacctcagaaacattcttcacaggacca
ccaggtccaccaggcccaccaggcccgaagggagaccgaggcgaacaaggtccacgagga
ttcactggagaaccgggtgagcctggcctttcagcgttctcatcccatggtgacagagtc
accatgcagggacctccaggagttccaggcccaccaggcccacctggacccaaaggtgat
gcaggtgtcccaggcgctcctggcatcccaggagcatctcgaggtggatccagacaaatt
cagggacccccaggacctcctgggccacccggtcctcctggcccaggtggaagttcatct
caagagattcagcagtatgtcactgactacctgaaaagtgacaacgtaaggcattatttg
gctggtgcccaaggcccaccaggccctccaggcccacctggagtcatcaccactgcggat
gggatgaacttggattatgcggagctggctacccgtgttatgaactatatgacaagctct
tcagatcgctatcagtcatttgccagttcggtatcaactacatccattttgtaccaagaa
cttctggacatgctgcagagagaagaaattcgtcagtatctaattggacctcggggccca
ccaggacctcctggaccagggggagatggcatgtctctgtcactggattatgatgagctg
accagacggtttatcagctacttgacaagttctgggatgagcattgggctccctggacca
cctgggcctccagggacacctggtatatcttacagtgacctgacagcatacctgcgaaac
tctgaattcagtggtcttgttgggccccctggtcctgcagggcccccaggacctccaggg
atccccggatcacctggcacctctctggaggacatctcttcttacctacaaagtgtggga
tactcctccctctctggagtccagggtccacctggccctcctggccctccaggaccacca
ggcttctcaggaactggcctcctgtcctatgctgacatcacccacagtgacgagttcagg
agtgagctgatccagtacctgaagagtgatgaagttcgaagctacatctcagggccacct
gggccccctgggccacgaggaccaccaggacccaaaggagatagtggcttggtgtctggg
tctatgtctgcatcataccaagggctacggaattccgagcagttgcatggaggatccctt
ggtgctgagggatcccatgggggctcactgggcacaggcagctcatatggcagctccatg
agcagcatgtcatcttacagtgcctcactgggcagtgatggctcttatgatacctccatg
ggcagtgacaggtctttcgatgcgttgctgacagaagaggaatcacacagatcggcaggt
tcaagcagatcctacagcagctccttcactggttccctggattacaatgagctggcactc
cgcgtgtcagagaacctacagagccgtggtattctccaggacctgatgtcttacactgca
cagggacctgcaggtcccccaggccctcctggtccccctggcatcagcagggtttttgca
gcctatggcaatgtcactgaggacctcatggacttctttagaacatatggtaccatccag
gggccacccggtgaaaagggggaaaggggttatcctggacccaaaggtgaccctggacca
atgggcccgccaggacgccacgggcacaggggaccaaaaggagagaaaggagagaaaggt
gaacaagtgtatgttggcagaagaaaaagaagaagtgtgggggtttaa
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