Ciconia boyciana (Oriental stork): 140656294
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Entry
140656294 CDS
T10948
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
140656294 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cboy01009
]
140656294 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cboy04515
]
140656294 (PCDH1)
Protein phosphatases and associated proteins [BR:
cboy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140656294 (PCDH1)
Cell adhesion molecules [BR:
cboy04515
]
Cadherins
Protocadherins
140656294 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
K319L-like_PKD
TMEM154
Mid2
MLANA
Syndecan
Motif
Other DBs
NCBI-GeneID:
140656294
NCBI-ProteinID:
XP_072727865
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All DBs
Position
9:complement(20752759..20807403)
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AA seq
1225 aa
AA seq
DB search
MQTPLDQRARGRHGARRRPHPTPLQHRMKLLASCLGLWLLFQLPALVSGTRVVYKVQEEQ
PPNTLIGSLASDYGFPDVGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLP
GQPCFLEFEVSITDLILNSSPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNIGALFP
IPLAMDRDSGPNGVASYELMAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDL
TIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSD
QGANAEIDYSFHQASDMVRRLLRLDRTTGLITVQGPIDREDVNILKFSVMAKDKGANPKS
ARTQVVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENA
VVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSS
TNSLKVQVVDVNDNAPVFSQSFTEVAFPENNEPDDLVMEVSASDADSGSNAKLVYSLVTD
PSSKGSFTIDPDSGEIRVKAVLDREQRERYEFLVVAADKGSPSLKGTASVAINVMDRNDN
DPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTIL
SSISFDREQQSTYTFRLKAVDSGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILP
HTSPGQQVSKVKAEDIDSGVNAELTYSITGGNPFELFQISPHSGDITLEKEILRKHHGLH
RLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSK
QRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKS
KSKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHY
RSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKY
TNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHY
ERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECTEFGHSDTCWMPGQSSPSRRPKNAL
KLSTFVPYQDRGSQEQVGNGSPRLSEERSTKMANLRLLPTYSAFSNSSHEPCKDSPMEEI
PLTQTSDFQPATTPSSQTTKREIYL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgccgctggatcagcgcgcaaggggccggcacggagcgcggcgccgtccgcat
ccaactcctctgcagcacaggatgaagttgctggcatcctgcctgggcctgtggctcctg
ttccagctccctgccctggtctctgggacgcgtgtggtctacaaagtgcaggaggaacaa
ccccccaacaccctcatagggagcctggcctctgactatggcttcccggatgtggggcac
ctctacaagctggaagtgggggccccgtacctacgtgtggatggcaagactggggacatc
tacaccacagagacctccattgaccgggagagcttgcgtgagtgccagcacctcctgcct
ggacagccctgcttcttggagtttgaagtgtccatcactgacctgatcttgaacagcagc
ccacgcctgcttgaggggcagatagaggtgctcgatatcaatgacaacacccccaacttt
gcctcgcctgttctcactctctccatccctgaaaacaccaacatcggggcgctcttccct
atccccctggccatggacagggactcaggccccaacggtgttgcctcctacgagctgatg
gctggtccagaggcacaggagctctttgggctgcaggtggcggaggatcaggacgagaag
cagccacagctgattgtcatggggaacctggaccgggagcagtgggactcctacgatctg
accatcaaggtgcaggatggaggcaacccaccgcgggcgagcagcgccctgcttcgcatc
actatcctggatatgaatgacaatgcgcccaagttcgagaaggccctgtatgaggcggag
ctctctgaaaacagccctgtggggcactctgtcctccaggtgaaagccaatgactcagac
cagggtgccaatgctgaaatagactactccttccaccaagcttcggacatggtgcgccgg
ctgctgcgcctggaccgcaccacggggctcatcaccgtgcaggggcccattgaccgcgag
gatgtcaacatcctcaagttctctgtcatggccaaagacaagggggccaaccccaagagt
gcccgcacccaggtggtggtcaccatcaaggacatgaatgacaatgcgccctctatagag
atacggggcattgggctcgtgacccaccaggacggcatggcgaacatctcggaggacgtg
ccagtagagacagcagtggctctggtgcaggtgtctgaccgagatgagggtgaaaatgct
gtggtgacctgcgtggtggctggtgatgtcccattccagctacggcaggctagtgaaaca
gggagcgacagcaagaagaaatatttcctgcagaccaccacgccgctggactatgagtcg
gtgaaggagtacacgattgagattgtggcggtggactcagggaacccgcccctctccagc
accaactctttgaaggtgcaggtggtggatgtgaatgacaacgcacccgtcttcagccag
agcttcaccgaagtggccttccccgagaacaatgagcctgatgacctggtgatggaggtg
agcgccagcgatgctgacagtggctccaacgccaagctggtttactccctggtgacagac
ccctcctccaagggctcattcaccattgatcctgactccggggagatccgggtgaaggcg
gtgctggacagagagcagcgggagcgctacgagttcttggtggtggcagcagacaagggc
agccccagcctcaagggcacagcgtctgtggccatcaacgtcatggacaggaatgacaat
gaccccaagttcatgctgagtggctacaacttctcagtaatggagaacatgccgcccctc
agccctgtgggcatggtgacggtgatcgatgctgacaaaggagaaaatgcccgcatccag
ctgtcggtggagcaagacaatggggattttgtcatccagaatggcactggcaccatcctc
tccagcatctcttttgaccgggagcagcagagcacgtacactttccgactcaaggcggtg
gacagtggggatcctcccaggtctgcctacgtgggggtgaccatcaatgtcttggatgag
aatgataatgcccccttcatcacttcaccctccaatgccacctacaaacacatcctgccc
cacaccagccctggccagcaggtgagcaaggtcaaggcagaggacattgactctggtgtc
aatgcggagctgacctacagcatcacaggaggcaacccctttgagctcttccagatctcc
ccgcacagtggagacatcaccctggagaaggagatcctgcggaagcaccatggcctgcac
cgcttggtagtgcgcgtcaatgacaagggcaagccctcgcggcacggcacagcgttggtg
cacttctacgtcaatgagactctggccaaccgcacgctgctggacacactggtggggcac
agcctggacacaccgcttgacatagacatcgctggagacccggaatacgagcgcagcaag
cagcgaagcaacatccttttcggagtcattgccggcatcgtggccgtcaccctggtcatt
gtgctggttgtcctggtgcgctactgccggcagcgggaggccaagagtggctaccaggca
ggcaagaaggagaccaaggacctgtacgcacccaagcaggccagcaagagtggtaagagc
aagagcaaggtgaaaaagagcaagtccccaaagccgcctaagcccacggaggatgaggag
gagacggggctgcagaaatcactcaagttcaacctcatgaatgactctgtcagcgacagc
ccccgaatccacctgcccctcaactacccgccaggcagcccagacctgggtcgccactac
cgctccaactcgccactgccctccatccagctgcagcctcagtcgccctctgcctccaag
aagcaccaagtggtgcaggacctgccggccaccaacacctttgttggcactggggacaac
aactcgacgggctccgagcagtactcggactacagctaccgcaccaatccccagaaatac
accaacaagcagttacctcatcgccgagtgacgttctctgcagccagccaggctcaggac
ctgcaggatccctcccagcacagctactatgacagcggactggaggagtcagagacccca
agcagcaaatcatcgtcagggcctcgcattgggccgctagccctgcctgaggatcactac
gaacgcaccacgcctgacggcagcatcggagagatggagcaccctgagaatgatctccgg
cctctgcctgatgtagccatgactgggacctgtacccgggagtgcacagagtttggccac
tccgatacctgctggatgcccggccagtcctcccccagccgcaggcccaagaacgccctc
aaactctccacttttgtgccttaccaagacagagggagtcaagagcaagtcgggaatggc
agccccagactctcagaagagcgcagcaccaaaatggccaacctccgcctgctccccacg
tacagtgccttctccaatagtagccatgagccctgcaaggactctcccatggaggaaatt
cctctcacccagacctcggacttccagccagccaccaccccctcgtcccagaccaccaag
agggagatatacctgtga
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