Ciconia boyciana (Oriental stork): 140656352
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Entry
140656352 CDS
T10948
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140656352 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cboy03041
]
140656352 (DDX46)
Enzymes [BR:
cboy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140656352 (DDX46)
Spliceosome [BR:
cboy03041
]
Complex A
U2 snRNP components
U2 related factors
140656352 (DDX46)
Complex B
140656352 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
140656352
NCBI-ProteinID:
XP_072728040
LinkDB
All DBs
Position
9:3818178..3843067
Genome browser
AA seq
1045 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRGKRGEDRRSRSRDRERRRERSRSRDKRRS
RSRDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNRKTENRSRSK
EKTEGVEVSKEKKKDKEDKEEEKDKDATTNTVATENFDQNKLEEEMRKRKERVEKWREEQ
RKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEE
VKEEVKKFNMRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAAESEKKKGELMENDQDAMEY
SSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYR
LELEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIG
IAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGL
RVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRM
FDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVE
QHVIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGID
QYDRDSIINDFKNGICKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAG
NKGYAYTFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGKLIKKSSGFS
GKGFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPG
TSNAPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKDVMQQATNAILRGGTI
QAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTAR
WKVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEIT
RLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtccaggcattatcggaagcgctctgcgtcacgtggacgctctggtagc
cgttccagaagtcgttctccatctgacaaaagaggaaaacgtggagaagacagacgctct
agaagtagagatcgagaacgtagacgtgagaggtcacgcagtagggacaagagaaggtct
cggtcacgtgacagaaagcgtcaaagacgttcaagaagtagagaaagggaacggagccga
gagagaagaagatcccggagccgagagaggaggcgctctagaagcagaagtagaggtaga
cggtctcgatcctccagtccaagcaagaacaggaaaacagaaaacagatcaaggtctaaa
gaaaagacagaaggtgtggaagtttccaaagaaaagaaaaaagacaaagaagacaaagaa
gaagagaaggataaagatgctaccacaaataccgtggccactgagaattttgatcagaac
aaactagaagaagaaatgagaaaacgaaaagaaagagtggagaaatggagggaagaacaa
cgcaagaaggctatggaaaacataggagaactgaaaaaagaaattgaagagatgaaacag
gggaaaaaatggagtttagaagatgatgatgatgatgaagaggaaactgcagaaggagaa
aaagaaggcaatgaggttgaagatgaagagttagatcctttggatgcttatatggaagaa
gtaaaagaagaggtcaagaagttcaatatgagaagtgtgaaaggtggaggtgggagtgaa
aagaaatccggaccaactgttaccaaggtagtaaccgtggtgacaacgaaaaaggcagct
gcagagtcagaaaagaagaaaggggagctcatggagaatgaccaagatgcaatggagtat
tcctcagaagaggaggaagttgatcttcagactgccctgactggctatcagaccaagcag
agaaagctgctagaaccagtggatcatggaaagatagaatatgaacctttcaggaaaaac
ttctatgttgaagtaccagaactagctaaaatgactcaagaagaggtgaatgtgtacagg
ctggagttggagggaattacggtcaagggaaaaggctgccccaaaccaataaaaacctgg
gtacagtgtggtatttccatgaagattctcactgccctcaaaaaacatggctatgaaaag
cccactcccattcaaacccaggctatcccagcaattatgaatggacgcgatttgatcggc
attgctaaaacaggaagcggaaaaactattgcatttctgttgcccatgttcagacacatt
atggatcagagagcgttagaagaaggagaaggtcccatagctgtcattatgacacctact
cgtgagttggctttgcagattaccaaggagtgtaagaaattctcaaagacacttgggctt
cgagttgtctgtgtttatggaggaacaggaatcagtgaacagatagctgaactcaaaaga
ggtgctgaaattattgtttgcacacctggacgtatgattgacatgttagcagctaacaat
ggtcgggtgacaaatctccgtagagtcacatatgttgtacttgatgaagcagacagaatg
tttgacatgggttttgagcctcaggttatgcgcattgtagacaacgtcaggcctgatcgt
cagactgtcatgttctctgctacttttcccagagctatggaggcattagctcggagaatc
ctaagtaaacctatagaagtgcaggtcggaggcagaagtgttgtctgttctgatgtggag
caacatgttattgtcatagaagaggagaacaagtttttgaagttactggagctactggga
cactatcaggagaaaggatcagttatcatatttgtagataaacaagaacacgctgatggg
ttgttgaaagatttaatgagagcatcttatccttgcttgtctcttcatggaggtattgat
cagtatgacagggacagcataattaatgatttcaagaatggaatttgcaaacttctggtg
gccacatctgtagcagcaaggggcttggatgtaaaacagttgatgcttgtggtcaattac
agctgtcccaaccattatgaagattatgtgcaccgagcaggccgaactggacgagccggc
aataaagggtatgcatatacattcattactgaggatcaggcacggtatgctggtgatatc
attaaggctttggaattgtcggggaatccgattcctactgatttggagaagctctgggct
gacttcaaagaccaacagaaggctgaggggaagttgattaaaaaaagcagtggattctct
ggcaaaggttttaaatttgatgaaacagagcaggctttggctaacgaaagaaagaagcta
caaaaagcagctcttggcttgcaagattcagatgatgaagacacagctgttgatatcgat
gaacaaattgaaagcatgttcaattcaaagaaaagagtaaaagacatggcagcaccagga
acatcaaatgctcctacaccgtcagctgggaatgcggaaaaattggaaattgctaaaaga
ttggctttgagaatcaatgcccagaagaatcttggagcagaggcacaagtattggtcccc
ttccactttaaggatgtgatgcagcaggctacaaatgctatcctgagaggaggcacaatt
caagctcctactgtatctgccaagaccattgcagagcaactggctgaaaaaatcaatgct
aagctcaattatgtgcccatagagaagcaggaggaagagaaacaggatggaggacaaaac
gaatcctttaagagatacgaagaagaattggagatcaatgacttcccacagactgccaga
tggaaagttacctccaaagaagcgctccagagaatcagtgaatattctgaagctgctatt
acaatcagaggaacttatttccctccaggcaaagaacccaaggaaggagaacgaaagatc
tatttggctatagaaagtgccaatgaactggctgtacagaaagcaaaggcagaaatcaca
cgacttataaaagaggagctcatcagattgcaaaattcataccaaccaaccaacaaagga
agatacaaagttctatga
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