Ciconia boyciana (Oriental stork): 140657343
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Entry
140657343 CDS
T10948
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140657343 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cboy03041
]
140657343 (PRPF40A)
Spliceosome [BR:
cboy03041
]
Complex A
U1 snRNP components
U1 related factors
140657343 (PRPF40A)
Complex B
140657343 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
140657343
NCBI-ProteinID:
XP_072730328
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All DBs
Position
10:1985642..2013175
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AA seq
1028 aa
AA seq
DB search
MSGGDSAAAAATASPQPLPFSLPKPPPLMQLTPGDAVRPVASAADQSPKSTRLAGRPDWP
AGKPVSLLAPLLPPRGEPEPLMPFGPSSRQPLRGRLLGRCSGGSLLSPSMRPGGVDRGSL
MMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGMM
MSHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQSSVLFRPQTTHPVVCAAQQTATTNSSVN
EEHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGK
PYYYNSQTKESRWAKPKELEDLEAMIKAEENSTKPEESTPATSAPAAAAEATNTTTTATT
AAETAAAVTTTTATSAATAAPEAESAAASSVAENESTGTAAAEEQGQATSAPAVQDQSGE
TAANAADDSSKQEASADAASKKEDDDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNAS
WEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENH
EKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEAL
KNILDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEE
EKQKSLLRERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPV
FSSGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRAT
TLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDI
RDRFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRS
GSESEDDDSHSKKKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDI
EREKDKKERERESEKDRARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTL
LEQLDEDQ
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggggactcggcggcggcggcggcgaccgcctccccgcagccgctcccgttc
tccttgccgaagccccctcccctcatgcagctgacgccgggggacgctgtccgccccgtc
gcctccgccgcggaccaatcgccgaagagcacccgactggcgggccgcccggattggccg
gccgggaagccagtcagcctgctggccccgctgctcccgccccgcggggagcccgagccg
ctcatgccctttggcccctcgtcgcggcagccactcagagggcggcttcttggcaggtgc
agcgggggcagcctgctgagcccctcgatgcggcccggcggcgtcgaccgcggctccctc
atgatgggacacccaggcatgccgcattatcctcccatgggaatgcaccctatgggtcag
agaccaccaaatatgccgccagttccgcatggtatgatgcctcagatgatgccccccatg
ggaggaccaccgatggggcagatgcctggaatgatgcagtcagtaatgccaggaatgatg
atgtctcacatgtctcaagctgctatgcagcctacagttccgccaggggtgaacagtatg
gatgcgcaagtaggcgtaacacctcctggaactcagagctctgttttgtttcgccctcag
acaacgcatcctgtagtttgtgcagcccagcaaactgccacaaccaacagttctgttaat
gaagagcactctaaacagaaatctacgtggacagaacacaagtcacctgatggaagaaca
tattactataatactgaaacaaagcagtctacatgggagaagcctgatgatctcaaaaca
cctgctgagcaattgttgtctaagtgtccctggaaagagtataaatctgattctggaaag
ccctactattataattcccaaacaaaggaatcgcgatgggcaaaacccaaagagcttgag
gatctcgaagcaatgattaaagctgaagaaaacagcacaaagcccgaagaatcaactcca
gcaacatctgctccagctgctgcagcagaagcaacaaacacaaccaccacagccactact
gctgctgaaactgctgcagctgttactaccaccactgctacttctgcagcaacagcagcc
cccgaagcagaatctgctgcagcttcttctgtggcagaaaatgagagtactggcacagcc
gcagctgaggaacagggacaagcaacttctgcacctgctgtgcaggaccagagtggagaa
actgcagctaacgcagcagacgactcctccaagcaggaggcttcagcagatgctgcttca
aagaaagaggacgacgatgcccaaccggttaaaaaaacctatacatggaatacaaaggaa
gaagcaaagcaagcatttaaagaactgttaaaagaaaagcgagtaccatccaatgcttct
tgggagcaagctatgaaaatgatcattaatgatcctagatacagtgctttggcaaaatta
agtgaaaaaaagcaagcctttaatgcttacaaagttcaaacagaaaaagaagagaaagaa
gaagcaaggtcaaaatataaagaagctaaagaatccttccagcgttttcttgaaaaccat
gaaaagatgacatccacaacaagatacaaaaaagctgaacaaatgtttggggagatggaa
gtctggaatgcaatatctgagcgtgatcgtcttgaaatttatgaagatgtgttgtttttt
ctgtctaagaaagagaaggaacaagccaaacagttacgaaagaggaattgggaagcctta
aagaacatactagataacatggctaatgtcacttactgtactacttggtcggaggctcag
cagtatctgatggacaatcctacatttgcagaagatgaggaacttcagaacatggataag
gaggatgcactcatctgttttgaggaacatatcagggcattggaaaaagaggaggaagaa
gaaaaacagaaaagtttgcttagagaaagaaggcggcagcgtaaaaacagagaatctttt
cagctatttttagatgaactgcatgagcatggacaattacattcaatgtcttcttggatg
gagttgtacccaaccataagctctgacatcagattcactaatatgcttggtcaacctgtt
ttttcatcaggatcaacagcacttgatcttttcaagttctatgttgaagacttgaaagca
cgttaccatgatgaaaagaagataataaaagatatcttaaaggataaaggatttgtggtt
gaagtgaatacttcttttgaagattttgttacggtcatcagttcaactaaaagagctact
actttagatgcaggaaatatcaagctggctttcaacagtctgctagaaaaggcagaagcc
cgtgaaagagagagggaaaaagaagaagctcgcaaaatgaagcggaaagagtctgccttc
aagagtatgttgaagcaagctactcctccaattgaattggacgctgtctgggaggatatc
agagatagatttgtgaaggaaccagcatttgaagacatcactctggagtctgaaagaaaa
agaatatttaaagatttcatgcatgtactagagcacgagtgtcagcatcatcattcaaag
aacaagaaacattctaaaaagtctaaaaaacatcacaggaagcgatcacgttctcgttcg
ggctcggagtctgaggatgatgacagccattcaaagaagaaaaggcagcgttcagaatct
agatcagtttctgagcgttcttccagtgcagaatctgagagaagttacaagaagtcaaaa
aaacacaagaaaaagagcaagaagagaagacataagtctgattcaccagaatcggatatt
gaacgagaaaaagacaaaaaagaaagagagagagagagcgaaaaggatagagctagacaa
agatctgaatcaaaacataaatctcctactaagaaacgacctggaaaagattctgggaac
tgggatacttctggcagtgaactgagtgaaggggagttggaaaaacagaggaggactctt
ttggaacaactggatgaagatcaatga
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