Ciconia boyciana (Oriental stork): 140657355
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Entry
140657355 CDS
T10948
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140657355 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cboy03041
]
140657355 (SF3B1)
03036 Chromosome and associated proteins [BR:
cboy03036
]
140657355 (SF3B1)
Spliceosome [BR:
cboy03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
140657355 (SF3B1)
Complex B
140657355 (SF3B1)
Complex C
U2 SnRNP specific factors
140657355 (SF3B1)
Chromosome and associated proteins [BR:
cboy03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
140657355 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
140657355
NCBI-ProteinID:
XP_072730365
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All DBs
Position
10:32857418..32881053
Genome browser
AA seq
1301 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKPALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYPSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKK
HRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGEL
KVVNGAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGS
ETPGATPGSKIWDPTPSHTPAGAATPGRDTPGHATPGHGGATSSARKNRWDETPKTERDT
PGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTP
AMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVP
IRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVD
ESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPT
LEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKA
AGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHT
GIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIES
FDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEE
MKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANK
VGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQ
TTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMK
TCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPI
LKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGY
IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNV
QNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFG
CEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRD
VYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYIL
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagacccacgaagatattgaagcacaaattcgagaaattcaagga
aaaaagcctgctcttgatgaagcacaaggagtaggccttgattccacaggatactatgat
caagaaatctatggtggtagtgacagcaggtttgctggatatgtcacttctattgcagca
actgaattggaagatgatgatgatgactacccttctacaagtttgcttggccagaagaag
ccaggctaccatgctccagtggcactgcttaatgacataccacagtctaccgaacagtat
gatccttttgcagaacaccgtcctcaaaagattgcagatcgggaagatgagtacaaaaag
cacaggcggatgatgataatttcccctgagcgtcttgatccttttgcagatggagggaag
acaccagatcctaaaatgaatgccagaacatacatggatgttatgcgtgaacagcattta
acaaaagaagagagggaaattaggcaacaactagctgaaaaagctaaagctggagagctt
aaagtcgtcaatggagctgcatctcagccaccttcaaaacgcaaacggcgttgggatcag
acagctgatcagactcctggtgctacacctaaaaaattatccagttgggatcaagcagag
actcctggacatacaccatctctgcgatgggatgaaactccaggccgtgcaaagggtagc
gaaactcctggtgccaccccaggctcaaaaatatgggatccaactcccagtcatacacca
gcaggagctgcaacccccggacgggacacgcctggtcatgcaacaccaggccatggaggt
gccacttccagtgcacgtaaaaatcgatgggatgaaacacctaaaacagaaagagatact
ccgggacatggcagtggatgggctgagacgcctcgtacagatagaggtggtgactccatt
ggtgagacaccaaccccaggagcgagtaaaagaaagtcacgatgggatgaaacacctgct
agccagatgggtggcagcactccggttctgacacctggcaaaacacccattggtacacca
gctatgaacatggcaactcctacaccaggtcatattatgagcatgactcctgaacagctg
caggcttggcgttgggaaagggaaatcgatgagagaaacagaccactttctgatgaagaa
ttggatgctatgtttcccgaaggatataaggttcttcccccaccagctggttatgtacct
attcgcactccagctcgtaagcttacagcaactccaacgcctttgggtggtatgactgga
ttccacatgcagacagaagaccggactatgaagagtgttaatgaccagccatctggcaat
cttccgttcctaaaaccagatgatatccaatactttgataaactgctggttgatgttgat
gaatcaactttgagtcctgaagaacagaaggagagaaaaataatgaaattacttctgaaa
ataaagaatggcacacctcccatgagaaaggctgcgttgcgacaaattactgataaagct
cgggaatttggagcaggaccattgtttaatcagattctgcctctgctgatgtcgccaacg
cttgaagatcaggagcgtcacttgcttgtcaaagtcatcgacagaattctttacaaactg
gatgacttggtccgaccatatgtacacaagattcttgtcgtcattgaaccactgctgatt
gatgaagactactatgctagagtggaaggcagagaaattatttcaaacttggctaaggct
gctggtttggcaacaatgatctccacaatgcgacctgatattgataacatggatgaatat
gtccgaaatacaacagctcgagcctttgctgtcgttgcctctgcgttgggcattccttct
ctgttacccttcttgaaagctgtgtgtaaaagcaaaaagtcctggcaggctaggcatact
ggcatcaagattgtacagcagattgctattcttatgggttgtgctatcttgcctcatctc
aggagcttggttgaaattattgaacatggtctggtggatgagcagcagaaagttcgcacc
atcagtgctttggctattgctgctttggctgaggcagctactccctatggtattgagtca
tttgattctgttctgaagcctttatggaagggtatacgtcaacacagaggaaagggtttg
gctgcctttttgaaggctattggttacctgattccactcatggatgctgagtatgcaaac
tattataccagagaagtcatgctaatccttatcagagagttccagtctcctgatgaagag
atgaaaaaaattgtgttgaaggtggtaaagcagtgttgtggtacggatggtgttgaagca
aactacattaaaacagaaatcttgccaccttttttcaaacacttctggcagcacagaatg
gcattggacagaagaaattacagacagttggttgatacaactgtggagctggcaaataaa
gttggagcagcagaaattatttccagaattgtggatgatctgaaagatgaggctgagcag
tacagaaaaatggtcatggaaacaatcgagaagataatgggaaatctgggggcagcagac
attgatcataaactggaagaacaacttattgatggtatcttgtacgcctttcaggaacag
accacagaggattctgtgatgctgaatggttttggcacagtggttaatgctctaggcaag
agagttaaaccctacttgccacagatctgtggtacagttttgtggcgtttgaacaacaaa
tcagctaaagttaggcagcaggctgctgacctgatctctcgtactgcagttgtcatgaag
acttgtcaagaggaaaaactgatgggacatttgggtgttgtgttgtatgagtacctgggt
gaagaatatcctgaagtactgggcagcatactgggagcacttaaggctatcgtgaatgtt
ataggtatgcacaagatgacgccaccaatcaaagatctgctgccacggcttacacctatt
ttgaagaacagacatgagaaagtacaggaaaattgtattgatcttgttgggcgcattgca
gaccgaggtgcagaatatgtttctgcaagagagtggatgaggatctgctttgaactgctt
gaattactaaaagctcacaagaaagctatccgaagagccacagtgaacacttttggttat
attgcaaaagctattgggcctcacgatgtattggctacactgctaaataacttgaaagta
caggaaaggcagaacagagtatgtactacagtagcaattgctattgtagctgaaacgtgc
tcacctttcacagtgctgcctgcactcatgaatgaatacagagttccagaactgaatgtc
cagaatggtgtgttaaaatctctttctttcctgttcgaatacattggagagatgggaaaa
gattacatttatgctgtcacaccattgcttgaagatgctttaatggacagggatcttgta
cacagacaaacagccagtgccgtggtgcaacatatgtctcttggtgtttatgggtttggc
tgtgaagattctcttaatcatttgttaaattatgtatggcctaatgtgtttgaaacctct
cctcacgtcattcaggcagttatgggggctctggaaggcctcagagttgctattggtcct
tgcagaatgttgcagtattgtttacagggtttgtttcaccctgccaggaaagtcagagat
gtttattggaagatttataattccatctacatcggatcacaggatgctctgatagcacat
tatccaagaatctataacgatgaaaagaacacctatattcgttatgaacttgattacatc
ttataa
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