Ciconia boyciana (Oriental stork): 140657716
Help
Entry
140657716 CDS
T10948
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cboy Ciconia boyciana (Oriental stork)
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cboy04121
]
140657716 (PDZRN4)
Enzymes [BR:
cboy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140657716 (PDZRN4)
Ubiquitin system [BR:
cboy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
140657716 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-rbx1
PDZ_Tricorn
TRAF3_RING
Prok-RING_4
IBR_1
Motif
Other DBs
NCBI-GeneID:
140657716
NCBI-ProteinID:
XP_072731310
LinkDB
All DBs
Position
1:33065764..33318508
Genome browser
AA seq
1052 aa
AA seq
DB search
MGFDPSRFAAPVAAELQCKLCGRVLEEPLSTPCGHVFCAGCLLPWAARRRRCPLRCQPLA
AAELRPVLPLRSLVQKLEVKCDYSPRGCGRTVRLRELPAHLAACRYGPPPPPPGPAEPEP
QPRGGPPPGRSGGGSAGQPRRPEPGAPPRPRAGGGHRCLRALRGGGGGGSPEPGPELKKE
ALRWSRREKSLLAQLSALQSEVQLTARRYQAKFGQYMSHISSITRDLAGSQPGKGGEPKP
LTIMLHRENDTLGFNIIGGRPNQNNQEESAEGIYVSKILENGPADKAEGLQIHDKIIEVN
GKDLSKATHEEAVEAFRNAKEPIVVQVLRRAPLSKAHGSSQDVRLVDASTQTDITFEHIM
ALAKLRPSTPPVPDICPFLLSDSCHSLHPVEHEFYEGNEYLSSLPADADRAEDFEYEEVE
LCRISSQEKLGLTVCYRTDDEEDTGIYVSEVDPNSIAARDGRIREGDRILQINGQDVQNR
EEAVALLSSEECKKIVLLVARPEMQLEEGWLDDERNEFLEELNLEMLEEQHNEAMQYTAN
EVEQPKKHEEEDGTTDTATSSSNNHEKDSGVGPTDESLRNDESSEQENAPEEQNSATLQS
KRELGHSQDTLGSVELQCNESFVSGEYIESDFIGNPEEECERFRQLLELKCKIRNHGEYD
LYYSSSTIESNRREQDGVEHELQLLNEELRNIELECQNIMQAHRLQKVRDQYGDIWALHD
EGFRNYNTSIDVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRSTPLTVERSPDNSLQRMI
SITNRKNLRSTTVANQSSSGQSNRETTSAKTKPTEQNSAAEDAVLASESGKFTDQEKQSS
EHIPYLSPYHSSSYRYGNIPAHAKHYQSYMQLIQQKSAVEYAQSQLSLVSMCKDSQKCAE
PKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKE
ERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKIL
DNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgacccgtcgcgcttcgcggcgccggtggcggcggagctgcagtgcaagctg
tgcgggcgggtgctggaggagccgctgtccacgccgtgcgggcacgtcttctgcgccggc
tgcctgctgccctgggcggcgcggcggcggcgctgcccgctgcgctgccagccgctggcg
gccgccgagctgcgccccgtcctgcccctccgcagcctcgtccagaagctggaggtcaag
tgcgactacagcccgcggggctgcggccgcaccgtgcggctgcgagagctgcccgcccac
ctcgcggcgtgccgctacgggccgccgccgccgccgcccggccccgccgagccggagccg
cagccgcggggcgggcccccccccggccgctcggggggcggctccgcggggcagccgcgg
cggcccgagccgggggcgcctccgcggccgcgggcgggcggcgggcaccgctgcctgcgg
gcgctgcggggcggcggcggcggcggcagcccggagccgggtcccgagctgaagaaggag
gccctgcgctggagcaggagggagaagtcgctgctggcgcagctctcggcgctgcagagc
gaggtgcagctgacggcgcggcggtaccaggcgaagttcggccagtacatgagccacatc
agcagcatcacccgcgacctggcgggcagccagcccggcaagggaggagaacccaaacca
ttaacgatcatgctacaccgagaaaatgatactttgggattcaatattataggaggacga
cccaatcagaacaatcaggaggaatctgctgagggaatttatgtgtcaaagattttggaa
aatggacctgcagacaaagcagaaggcctgcaaattcatgacaagattattgaggtcaat
gggaaggacctctccaaggccactcacgaagaggcagtggaagcttttcgcaatgccaag
gagccaattgtagttcaggttttacgacgagccccacttagcaaagctcatggtagctct
caggatgttcggcttgtggatgccagcactcagactgacatcactttcgagcacattatg
gctctggccaaactaaggccttccacaccgccagttcctgatatctgcccttttctgctt
tcagacagctgccattctcttcacccagtggagcatgaattttatgaaggtaatgagtat
ctttccagcctgcctgctgatgcagatagagcagaggactttgagtatgaggaggtagag
ctgtgccgcattagcagccaggagaagctggggctgactgtctgttacagaaccgatgac
gaggaggacacagggatctatgtcagtgaggttgatccaaacagcattgctgccagagat
ggacggatccgtgaaggagatcgcattttgcaaataaatggccaggatgtccagaatcgg
gaagaggcagtggcactgctctccagcgaagaatgcaagaaaatcgtgttgctggtcgca
agaccagagatgcagctggaagaagggtggctggatgatgaaaggaatgaattcttagag
gagttaaacttggaaatgttggaagagcagcataatgaagcgatgcagtacacagccaat
gaggtggagcagccaaagaaacatgaagaggaggatggcactacagacactgcaacctca
tcatccaacaatcacgagaaggacagtggggtgggacctacagatgaaagtctgcgtaat
gacgagagctcggagcaagaaaatgcacctgaggagcagaacagcgctaccctgcagagc
aaacgggagctgggccacagccaagatacattaggaagtgttgagctccagtgcaatgaa
agctttgtgtctggggagtacattgagtctgatttcataggaaatccagaggaggaatgt
gaaaggtttcggcagctgctggaactgaagtgcaagattcgaaaccacggggagtatgac
ctgtattattcaagcagcacaatagagtccaacagaagagagcaagatggagtggagcat
gagctgcagctactcaatgaggaactgaggaacattgaactcgaatgtcagaatattatg
caagctcaccggctccaaaaggtgagggatcagtacggagacatttgggctttacatgac
gaagggttcaggaattataacaccagcatagatgtacaaagaggcaaactggatgacatc
atggagcaccctgagaagtccgacaaggacagctccagtgcctacaacacggccgaaagt
tgcaggagcactccgctgacagtggaacgatcccctgataactctctccagaggatgatc
agcataaccaacaggaaaaacctgaggagcacaactgtggctaatcagtcatcctcagga
caaagcaacagggagacaacctcagccaaaaccaaacccaccgagcaaaacagtgctgct
gaggacgcagtgctggcatccgaaagcggcaaattcacagaccaggaaaagcagagcagc
gaacacattccctacctgtctccatatcacagctcttcttacaggtacgggaatatacct
gctcatgcaaagcattatcaaagctatatgcaactgatccagcagaagtctgctgtggag
tacgcccaaagccagctcagcctggtgagcatgtgcaaagactcgcagaagtgtgcagag
cccaagatggaatggaaagtgaaaataaggagtgatgggacaaggtatatcacaaagaga
ccagttcgagacagaatcctgaaggaacgtgccttaaaaattaaagaggagcgcagtggg
atgacgacagacgatgatacgatgagtgagatgaagatgggtcgctactggagcaaagaa
gagcggaagcagcatttggtgcgagctaaggagcagaggaggcggcgggagttcatgatg
aggagcaggctggagtgtcttaaggaaagtccgcagagtggcagcgagggcaaaaaggaa
attaacattattgaactgagtcacaaaaagatgatgaaaaagagaaacaagaaaatcttg
gacaactggatgacaatccaagaactgatgacacatggtgctaaatctccagacggcaca
agagtgcacaatgcctttttatcagttactactgtatga
DBGET
integrated database retrieval system
