Ciconia boyciana (Oriental stork): 140657964
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Entry
140657964 CDS
T10948
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cboy Ciconia boyciana (Oriental stork)
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cboy04121
]
140657964 (PDZRN3)
Enzymes [BR:
cboy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140657964 (PDZRN3)
Ubiquitin system [BR:
cboy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
140657964 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Sina_ZnF
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-TRAF
Prok-RING_4
PDZ_Tricorn
zf-rbx1
U-box
TRAF3_RING
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
140657964
NCBI-ProteinID:
XP_072731863
LinkDB
All DBs
Position
11:12747814..12894792
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AA seq
1061 aa
AA seq
DB search
MGFELDRFSGDVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVNCQRIS
TKELNHVLPLKSLILKLDIKCDNHARGCEAVVPLQHLGEHAETCDFSPAKCRNRGCRQVL
NLRDVEAHMRERCEARPAGLCEQGCGLMLTHGERRAGGHGCLRALRAHGAALQARAAALE
KALKKEALRAGKREQSLLSRLAAAQLELQVTALRYQKRFTQYSARLDALARARAASPGKG
EETKALTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDTGPAAKEGGLQIHD
RIIEVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRTPRTKVFTPPHESQLVDVGTQTDI
TFEHIMALSKMGSPTPPVSVLDPYLLPEDHPSVHEYYDPNDYMGGIHQEMDRDELELEEV
DLHRVNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSIAAKDGRLREGDRIIQINGIEVQN
REEAVALLTSEESKNISLLVARPEIQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDDSTRNDESSEQENNADDHTTSSNTL
GSQKKLTYSHDTLGSGDMQFSNESFISADCTDVDFLGIPVDECERFRELLELKCQVKSAN
PYSLYYHNSTLDMSKSDQESVDRELEMLNEELRNIELECLNIVRAHKMQQLKDQYREPWM
LHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLR
RTAEGINCQGNEGAVAYNVSQKNLFASSESHESSTGKCHASAKDPDLGKQLESKERKASD
GSKSPTHGQKPSGSYVSPYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVS
MCKDFNSSQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERAIKIKEERSGMTTDDDAIS
EMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQGAEEKKEMNIIELSHKKM
MKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgagctggatcgcttcagcggggacgtggatcccgacttcaaatgcaatctg
tgcaacaaagttttggaggacccgctgaccaccccctgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcagcagggcagctgccccgtgaactgccagcgcatctcc
accaaggagctcaaccacgtcctgcccctgaagagcctcatcctcaagctggacatcaag
tgcgacaaccacgcgcggggctgcgaggcggtggtgccgctgcagcacctgggcgagcac
gccgagacctgcgacttctccccggccaagtgccgcaaccgcggctgccgccaggtgctc
aacttgcgcgacgtggaggcgcacatgcgggagcgctgcgaggcgcggcccgccggcctc
tgcgagcagggctgcggcttgatgctcacccacggcgagcggcgcgccggcggacacggc
tgcctgcgcgccctgcgcgcccacggcgccgcgctgcaggcgcgggcggcggcgctggag
aaggcgctgaagaaggaggcgctgcgcgccggcaagcgggagcagtcgctgctgtcgcga
ctggcggcggcgcagctggagctgcaggtgacggcgctgcgataccagaagcgcttcacg
cagtacagcgcccgcctcgacgccctggcccgcgcccgcgccgcctcccccggcaagggt
gaagaaactaaagcactgactctcgtccttcatcgtgactctggctctcttggatttaat
attattggtggccgaccgtgcgtggacaatcaagatggttcatctagcgaaggaattttt
gtatcaaaaatagttgatacagggcctgctgctaaggaaggagggctacagattcatgac
aggattattgaggtcaatgggaaggatttatctaaagcaacacatgagcaggctgtggaa
gcattcaaaacggccaaggagcccattgtggtgcaggtcctgagaagaactccacgcacc
aaggtcttcactcctcctcacgagtctcagctggtagatgtgggcacacagacagatatc
acttttgaacacatcatggctctaagcaagatgggctccccgactccacccgtctcggtg
ctagacccgtacctcctgcctgaagaccatccatcagtgcatgaatactatgacccaaat
gactacatgggaggaattcatcaagaaatggaccgagatgagttggaactagaggaagta
gatttacatagagtgaacagccaggacaagcttggcctgactgtatgttacagaacggat
gatgaagatgacatgggtatttatgtgagtgagattgatcccaacagtattgctgcaaaa
gatggtcgactccgagaaggggatcgtattattcagatcaatggcatagaggtacagaac
cgagaagaagctgtggcacttctcaccagtgaagagagcaagaatatctccttacttgtt
gcaagaccagaaattcagctggatgaaggatggatggatgatgacagaaatgattttctg
gatgacttgcacatggacatgttagaggaacagcaccaccaggcaatgcaatttactgcc
agcatgcttcagcagaagaagcatgaagaggatggaggtaccacagatacagccactatt
ttatctaaccagcacgagaaggacagcggcgtggggcgcacagacgacagcactcgcaac
gatgagagctccgagcaggaaaacaacgcggatgatcacaccacctcctccaacacttta
gggagccagaagaagctgacatacagtcatgacaccctaggaagtggcgatatgcagttc
agcaatgaatcatttatctcagccgactgcacagatgttgacttcctcggcatccccgta
gacgaatgcgagcgattccgggaactgctggaactgaagtgccaggtgaagtctgccaac
ccttacagtctgtattatcataacagcacgctggatatgagcaaaagtgaccaagaaagt
gttgacagagagctggagatgctgaatgaggagctgcgcaatatcgagctagagtgcctg
aatattgtgagagctcataaaatgcagcagctgaaagatcagtaccgggagccctggatg
ctacataacagcgggttccgcaactataacacaagcattgatgttcgcaggcacgagctc
tcagacattacggagctccccgagaaatctgacaaggatagctcgagtgcatataacaca
ggcgaaagctgccgaagcacaccactcacgctggagatctcccctgacaattcgctgcgc
agaactgcagaaggcattaactgtcaaggtaatgagggggcagtggcatataatgtctcc
caaaagaatttatttgctagctcagaaagtcatgaatccagcactggtaaatgccatgcc
tctgctaaagatcccgaccttggcaagcagctggaaagcaaggagagaaaagccagtgat
ggaagcaaaagccctactcatggtcaaaaaccttctggctcctacgtttccccgtaccat
cactctccatataagcacgctcatattcctgcccatgcacagcactatcagagctacatg
cagctgatccaacagaaatcagcggtggagtatgcacagagccaaatgagtctggtgagt
atgtgcaaagactttaattcaagccagagcgaaccgaggatggagtggaaagtcaaggtt
agaagcgatgggacccggtacattacaaagagaccagtcagggacaggctgctgagagaa
cgtgccataaagattaaggaggagcgcagtggtatgactaccgatgatgatgccataagt
gaaatgaagatgggccggtactggagcaaggaggagcggaagcagcatttagtgaaagcg
aaggagcagaggaggaggcgtgagtttatgatgcagagtaggttagattgcttaaaggag
cagcaaggggcagaagaaaagaaagagatgaatatcattgaactgagccacaaaaaaatg
atgaagaagagaaataaaaaaatatttgacaattggatgacaatccaagaactgctaacc
catggaacaaagtcaccagacggcacacgggtgtacaattccttcctgtcagtgactact
gtataa
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integrated database retrieval system
