Ciconia boyciana (Oriental stork): 140658614
Help
Entry
140658614 CDS
T10948
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
140658614 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cboy01009
]
140658614 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cboy04515
]
140658614 (PCDH11X)
Protein phosphatases and associated proteins [BR:
cboy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140658614 (PCDH11X)
Cell adhesion molecules [BR:
cboy04515
]
Cadherins
Protocadherins
140658614 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
K319L-like_PKD
Fibulin_C
Cadherin_4
TMEM154
Big_9
Motif
Other DBs
NCBI-GeneID:
140658614
NCBI-ProteinID:
XP_072733353
LinkDB
All DBs
Position
12:5358604..5875212
Genome browser
AA seq
1245 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNKPVFVIPASNYSYELVPTSASPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNSSYVQELVRRNMETPVGQNVGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSGSSDPYSVSECSCQGGFKTPGP
IHTRQHTKEMGRPQTPLKETTLEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGA
STSHPLPLGFPQEEYYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILG
HSDNCWMPPSLTQYQQSNTPLPSFGFQQGWGRGARPEGRHTLGRPLPKDDTDKGQGGPRP
QFYNTCKRHCASEDPVKVIPLANFAASHQAPVSGSSTTFIHEHQL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcttattagcctgtattgtatttcaa
tctggcgcacaggagaagaattataccgtgcgggaagaactgcctgaaaatgtcctcatt
ggcaatttgctcaaggatcttaacctgacgctggacccagatgtgcccctttcctcacca
ctacagttcaagcttgtgtataagactggggatgtaccattagtacgggtggaggagaac
actggtgagatattcacaactgcaaaccgcatagaccgagaaaagctgtgctctggcatc
tttagtgagaatcgctgcttttatgaggtggaggttgctgttttgcctgatgaagttttc
agactggtcaagatcagattcctaatagaggatataaatgacaatgctcccctcttcccc
tcaacagttattaacatctctatccctgaaaacacagcaattaattctcgctattctgtc
ccatctgccattgatccggacattggtgtgaacggtattcaacattacgaactccttaag
cccaaaacagctccgaaaaggacatttggatccattacaaacgatcagggtcaaaatgta
tttggtcttgatataattgagacacctgagggagataagtggcctcaactgattgtccaa
cagatcctggatagggagcagaaggatacctatgtgatgaaaattaaagttgaagatggt
ggaagccctccaagatctagcactgccatcctgcaagtcacagtgactgatgtgaatgat
aatcgcccagtcttcaaagagaatgacattgaagttagtgttccagagaatgctccagtg
ggcacctctgtttctcagctccatgccactgatgcagacctgggctcaaatgcacaaatc
cacttctatttcagcaatcagatatccagtttggccaaaaggctctttgccattgataac
accaccggcctcatcactataagagaaccactagacagggaggaatctcctgtacacaaa
ttaactgttttggcaagtgatggcagttcaactccatcaagagcaacagtgactgttaat
gtcacagatattaatgacaatgtcccatcaatagacacaagatacatcatcaatccagtg
aacgggacagtgcttttgtctgagaaggctccccttaatacaaaaattgcgttgataaca
gtaatggacaaggatgctgatctgaatggaaaagttacttgttttacagatcatgatgtc
ccttttaggctaaagccagtgtttgataatcagtttcttctggagacagccacgtttcta
gattatgaagccacacgggaatatgccattaaaatagtggcttcagattcagggaaacct
cccttaaaccagtctgcaatgctcctgatcaaaattaaagatgaaaatgacaatgccccc
gtttttacacagcctatcataggtctttccatccctgaaaacaatgctcctggtacgcag
ctaaccaagataagtgctacggatgctgacagtgggcgcaatgctgagatcagctatatc
ctgggttctgatgcaccccctattttcaaccttgaccgccgtacaggcattctgacagca
gtgagaaagctggacagagaaaagcaagacaggtactccttcactgtgctggctaaggat
aatgggatgccacccttgcagaccaatgctactgtcacagtgtccgtcctggaccagaat
gacaacagccctgctttcacacataatgaatataatttctatgtgccagaaaacctaccc
atgtatggcacagtggggcttatcacagttacagatgctgactctggagagaatgctgcg
gtcactctctctatattaaatggtagagataatttcattatagatccacttacgggtgta
ataagacctaatattacctttgatagggagcagcaggggtcatatactttccaggtaaaa
gctgtggatggaggaagactgcagcgttcctcaactgccaaagtgaccatcaatgttgtt
gatgtaaatgacaacaagcccgtttttgttattcctgcatctaattattcgtatgagttg
gttccaacatcagccagtccagggtctgtagttactaaagtctttgcagtggataatgac
acaggaatgaatgcagagctccgctatagcatcataggtgggaactcaaggggcttgttt
acaattgaccaattaacaggcaatattactttgaaagagaaggtaattacatcagatcat
ggcttgcacagactggtgataaaagtcaatgacctaggacagccggagtctctttatact
atagctcttgtgcatttgtttgtgaatgagacggtcaccaatagttcctacgtacaagag
ctagtgcgcaggaatatggaaactccagttggccagaatgttggggatggtgagataacc
ccacaaaccaatgattatgtcaagatcatcattgccattattgcaggcactatgacagtt
attctggtaatttttgttactgctttagtacggtgccgccagacgcctaggcacaaggtt
gtccaaaaaaacaagcagagtggggaatgggtttccccaaaccaagagaataggcagatc
aagaaaaagaagaagaagaagaagcgctctccgaaaagtctcctcctcaattttgtgact
attgaagaatctaagcctgatgatcctggccatgagcacataaatggcactttagacatt
cctgtagagctagaagaacagactatgggaaaatataactgggccaccacaccaaccaca
tttaagcctgatagcccagatttagcaaagcactacaagtctgcttctccgcagcctacc
tttcaaattaaacctgagactcctgtaccccccaagaagcaccatgtcattcaggaactg
cctctagataacacctttgtggtgggctgtgactcactctccaagtgctcatcaggcagc
tcggacccttacagtgtttctgaatgcagctgtcaaggaggcttcaagaccccaggcccc
atacacaccagacagcacacaaaagaaatgggaaggccacaaactcctttgaaagaaaca
accttggagccttggactcagccacagcctcagcgccgtgtcacgtttcacctaccagat
ggctcccaggaaagctgcagtgacagtgggctcggagaccatgaacccacgagcggtgct
agcacatcgcaccctctgcccctcggcttcccccaggaggagtactatgagcaagcttca
cccaacagccggacagaaggagacggcaactcagacccggagtccactatcgaagtaaat
ctccagaaagccctggctgaagcttctgaaacctgcacgcaggagtgtctcatcctaggc
cattctgacaactgctggatgccaccttctttgacacagtatcagcagtccaacacccct
ttgccatcgtttgggttccagcaaggctggggccgaggagccaggcctgagggacgacac
actcttgggaggccccttccaaaggacgacactgacaaaggccagggtgggcccaggccc
cagttctataacacctgcaaaagacattgcgccagcgaagatcctgtcaaagtcattcct
ctggcaaacttcgccgcgtcccaccaggcaccagtgtctgggagtagcactacgtttata
catgagcaccagctataa
DBGET
integrated database retrieval system
