Ciconia boyciana (Oriental stork): 140658863
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Entry
140658863 CDS
T10948
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03420
Nucleotide excision repair
cboy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
140658863 (ERCC4)
03460 Fanconi anemia pathway
140658863 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cboy03032
]
140658863 (ERCC4)
03400 DNA repair and recombination proteins [BR:
cboy03400
]
140658863 (ERCC4)
DNA replication proteins [BR:
cboy03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
140658863 (ERCC4)
DNA repair and recombination proteins [BR:
cboy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
140658863 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
140658863
NCBI-ProteinID:
XP_072733937
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Position
13:12015528..12032892
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AA seq
903 aa
AA seq
DB search
MAVLLEHESQIFLDLFHQDGLVICARGLGIDRLLLRFLRLYCEPASLVLVLNTSPAEEEY
FIDQLRSDGVVHLPRRVTNEITNNTRYEFYTQGGVIFATSRILVVDFLTDRIPANLITGI
LVYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNVVAFNTGFCHVERVMRNLFVRKLY
LWPRFHIAVNSFLEKHKPEVVEIHVSMTPAMLAIQTSILDILNACLRELKRYNPSLEVED
LSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCVTFLNLLE
SLKASEKAFGENSGWLFLDSSTSMFVNARARVYRIADEKLNQKGKLSEKSDVKKENELKR
ELVLESNPKWEALREVLKEIENENKNSEDLGGPGQVLICASDDRACAQLREYIIAGGEAF
LTRLYNKTFGKDEKDGELWIKDRKAIKSKGNARPDTGPQAKKAKLTASSKQNKHKKQQDR
TIIQMMGKTEEEKREELEVEDNKELSNSQESSTEETIPEDFHVNLPSDCYYGIFKNPLTI
IHPLQGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYFLIYGGS
TEEQRYLTALRKEKEAFEKLIREKASMVIPEEREGRDETNLDLIRDAKPASVSTDTRKAG
GQEQKSVQQTVIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSISDLI
GSLNNGRLYTQCISMSRYYKRPILLIEFDPNKSFSLIPRGSLHQEISSNDVTSKLTLLTL
HFPKLRILWCPSPHATAELFEELKQNHPQPDAETAMAVTADSEILPESDKYNPGPQDFLL
KMPGINTKNCRALMNHVKSIAELATLSKDELSKILGNAASATQLFDFIHLTYGEAISKGK
SKR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctgctggagcacgagagccagatcttcctggacctcttccaccaggacggg
ctggtgatctgcgcccgcgggctcggcatcgaccgcttgctgctgcgcttcctccgcctc
tactgcgagcctgccagcctggtgctggtgctgaacaccagccccgccgaggaggagtat
tttattgatcagctgaggtcagatggagttgttcatcttcctcggcgtgttaccaatgaa
attacaaataatactcgatatgaattttacacacaaggaggagtcatctttgcaacaagt
cgaatccttgtggtagatttccttactgacagaattcctgcaaacctcattaccggtatt
ttggtatacaaagcacacagaatcattgagtcctgtcaggaagcatttatcttgcgactt
tatcggcagaagaacaagcaaggcttcattaaagcttttacagataatgtggttgcattt
aacactggtttttgccatgtggaaagggtgatgagaaatctttttgtcaggaaactttat
ctgtggccaagatttcatatagcagtgaactcatttttagagaagcataaacctgaagtg
gtggaaatacatgtgtcaatgacccctgctatgcttgctatccagacttcaatcctggac
attttgaacgcatgtctgagagaactgaaacgttataatccatctcttgaagtagaagat
ctatctttagaaaatgctattggtaaaccttttgacaagacaatacgtcactatttagat
cctctctggcatcagcttggagctaagacaaaatctttggtccaggatttgaagatacta
cgtactttgttactgtatctaactcagtacgattgtgtcactttcctaaatcttctggag
tcattgaaagcaagtgaaaaagcttttggtgagaattcaggttggctgtttcttgactcc
agtacttcaatgtttgtaaatgctcgagctagagtttatcgcattgcagatgagaaactg
aatcagaaaggcaaactctctgaaaaaagtgatgtaaagaaggaaaatgaactgaaaagg
gaactggttctagaaagtaacccaaaatgggaagctttgagagaagtactgaaagagatt
gaaaatgagaataagaacagtgaagaccttggtggtccagggcaagtacttatttgtgcc
agtgatgaccgagcttgtgcgcagctcagggagtatattattgctggaggagaagctttt
ttaacaagactgtataacaaaaccttcggaaaggatgagaaggatggagaactgtggatt
aaggatagaaaagccatcaagtccaaaggaaatgccagaccagacacagggcctcaagcc
aaaaaagccaaactcacagcttcttcaaaacaaaataaacacaagaagcagcaagaccgg
actataatccaaatgatggggaaaactgaggaggaaaagagagaggagttagaggtggag
gataacaaagaattaagcaatagccaagaaagcagtactgaagagaccattcccgaagat
ttccatgtgaacttaccctcagactgttactacggcattttcaagaacccgctcacaatt
attcatccgttgcagggttgcagtgatccctatgcgctcactcgagtactgcatgaagta
gaaccaagatatgttgtattatatgatgcagaactaacttttgttcggcagctggaaatc
tacaaggcaagcaggcctgggaagcctttgagggtttatttcctcatatatgggggctca
acagaagaacagcgctatctcacagctctgagaaaagagaaggaggccttcgaaaaactc
attcgagagaaggccagcatggttattcctgaagaaagagaaggaagagatgaaacaaac
ttagacctaataagagatgctaaacctgcttctgtttctactgacacacgcaaagcaggt
ggacaggaacagaagagtgttcagcaaactgtaatagtggatatgcgggaattccgtagt
gagcttccgtcactgattcatcgtcgtggcattgacattgagcctgttactttggaagtt
ggagattatattttaactcctgatatctgtgtagagcggaaaagtatcagtgatctgatt
ggttccttaaataatggaagactgtatacacaatgcatttctatgtcccgttactataag
cgaccaattctcctgattgagtttgatcctaacaaatctttctccttgattccacgaggc
tctctacatcaggaaatttccagtaatgatgttacttctaaactaacccttcttacactc
catttcccaaagttacgtatcctgtggtgtccctctccccacgctactgctgaactgttt
gaagagttaaaacaaaaccatccccaacctgatgcagaaacagcaatggctgtcacagca
gattctgaaattcttcccgagtcagacaagtataaccctggtcctcaggacttcctatta
aaaatgccaggtattaacacaaaaaactgccgtgccttaatgaaccacgttaaaagcatt
gcagagctagcgacactgtcaaaggatgaactctccaaaattttggggaatgctgccagt
gccacgcaactctttgactttattcacctgacctacggagaagcaatatctaaaggaaaa
agcaaaagatga
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