Ciconia boyciana (Oriental stork): 140659061
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Entry
140659061 CDS
T10948
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
140659061 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cboy04121
]
140659061 (SLX4)
03400 DNA repair and recombination proteins [BR:
cboy03400
]
140659061 (SLX4)
Ubiquitin system [BR:
cboy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
140659061 (SLX4)
DNA repair and recombination proteins [BR:
cboy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
140659061 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
zf-C2H2_jaz
B129_C2H2-zf
zf-met
Motif
Other DBs
NCBI-GeneID:
140659061
NCBI-ProteinID:
XP_072734370
LinkDB
All DBs
Position
13:complement(17184782..17218854)
Genome browser
AA seq
1878 aa
AA seq
DB search
MDEQDNDFKELWANLLGRAKKKAGDTEAAKRAQNRSKSTAARSKLRRGKAAAKSQNHHHL
RAVKEMNLPQDLGPKEQTLVHKEDGDAVACSSGETAQGDGKRNPFPASQLSTVASECSQR
TLTVNTLSSCSQTTLSFHPATQPGTCSSPTSKIPPLAGSKMRVAELVVERMQQFKRVAPE
QLKHSTDDSLPKSVASGDFPDKSQEQNPPENDTHHLPSMEHDSALALALQQETKEEALAS
LEDAGLFFCQICQKDLSAMNTTRREQHVNRCLDEMEEAQMSSSSKPLVPECPICGKQFQT
PQSRVSHLKRCAVEMDVPPKLLLQAVQLQVSSLGDAPLQCPSNQPSGSKRKGSSKEDSKK
MQKRAKLETKDEDLLVAMAMSRSLLEQEKQEQAKSVTNVKPVAALPIKWKPGSEKKQRKR
GPTAPPPLLLQDPEKARKRIQERVAMLLAEEVEFPPTPQLPTSRILEDESGKATWLLPLS
KTRECFLWNISALTGPYDPESFYTAGLTPPIVPWKPVQNHKPENLLPSVGSDQPKVSQQI
QPDLSSHEPACTEVGGQTSDESKSGPEGDGQFLPHSQKDVQTLQDLVELAREGLTLTQWN
LDVAHVQAAEQPGKELTSSDTPRSGFVPSSKEKSLLTSSCKRSSLRLLAEDFSAMVNNPH
LSDVQFQVDCGEVLYAHMFVLYARCPQAIQVVHSQGFLVEEDGNAQTRRVLLSDVTGEAA
CAFLRYLYAADADIPAGVLPQVGALAARFGVRELMAKCEKNTGASQVSSGVDSEDDLISV
RDDKECEDRAENFQDLLKSVWVGEDEEEVAMLNPECQKEDDNRVGEQELEEIYEFAATQR
KMVQGETEVSEGTDCSICSDTEAAQGTNQQTEEEEVKRSESASISNSFKDLRDDNDVERS
KCDSSAQEEKMQNINRCKSVNDPQTTFVPHHSEPQKWDVASHDATANEGEAVRRCEGVKE
SESSQASHDKAHHCEKQFPSFHNDTNINESYERLFSATQGDYCEPSPMKEVIKESGKAPS
EKHADVNDSLLYSKSQKDLSPHRNGFYGSPPPKPYVPLFPAVGSSPATPKSERKFATEHV
STPKQNKQEKSFPSDEIHFQKANELDTASRNENTISPAELPHIDLNKHTCCHDPVLSSLV
IRTQDAAAQGNKEGDVIVLSSDDEMELQQDKKSPESGSALKKMEVPGQLKCTNVEQGPET
PKPEHNSSVTETEQRSTQVSCGITDTVHISNDVKMSTELPLSRQINACTESKRSPNLSPE
KRLGHEMSSGTDSSWLVPDTPVLSKSKSFSTQTQVTSINSLKSPGSKLSTKNLAAGNSNH
EMTGNLIKVCETTLSDKHLPMENSVSERSPSSSPAAGSFSKNSLPVSPGDPVLLSPGHTN
IKSKCAKISFSSKPVPPSHEQSVEDKTNISVVEVEDSEKEISLPSLNSSVLLCDEPPVPV
DDCWYVEYLSPVRGNSQDSNQVSHAKTSTASSARPGSWHDQWESPVHMQEIKGSTPLRGS
PVRRRTTLLCLEKSPIEPCSSVGSRPSYLNSKIWDDWNGEEEEDEFPEMLPLSQRLSAAA
RACQTDPVKTPEPSCQENNKPPSTPMTPMPAYSIMETPELKKELSRFGVRALPKRQMVLK
LKEIFQYTHQDVDSDFEDEVPYSQPPLQKSPAKRSRQSKADRTAGGKRANASRAVGKRKQ
VAMASSALPVGRADDDLVGSCETGCAAPKEGTETTHHPEGAKEQKRSSVSPERWSLAADG
EEPMLSASQESAVSSVDESDISFGSQSSFVNGFEACAFASEEEEEELPASQAAAREEDKL
EAVRCYIRSNTALYHKILFYEPIELADLHTELKQNGIKISKAKLLDFLDAHCITFTTAGA
RKEKEQKRKGNKKQRRRY
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacaggacaatgattttaaagagttgtgggcaaatcttttgggtagagcgaag
aaaaaagctggggatactgaggcagcaaagagggctcagaacaggtcaaagagcactgca
gcaagaagcaaattaagaagaggcaaagctgctgctaagagccaaaaccatcatcactta
cgagcagtgaaggaaatgaacttgcctcaagatttgggtccaaaggaacaaacattggtg
cacaaagaagatggtgacgctgtggcctgtagtagtggtgagactgcacaaggggatgga
aagagaaaccctttccctgccagccagctgagtacagtggctagtgagtgtagccagagg
accctgacagtaaatactctgagtagttgttcccagactaccttatccttccatcctgct
acgcagccagggacctgctcttcacccacctcaaagataccgccgctcgcagggtcgaag
atgcgggtagcagagctggtagtggagagaatgcagcagttcaagagagtggcacctgag
cagctaaaacacagcacagatgatagcttgccaaagtctgtagccagcggggatttccct
gacaaaagccaggagcagaacccaccagagaatgatacccaccatcttccatccatggag
catgatagtgctctggctttggctcttcagcaggaaaccaaagaggaagccctggcaagc
ctagaggatgcaggcttgtttttttgtcagatctgccagaaggatctctcggccatgaac
acaacacgacgagagcagcatgttaacaggtgtctggatgagatggaagaagcgcagatg
tcatcctccagcaaaccactggtccctgaatgtcccatctgcggcaagcagttccaaacc
ccacagagccgagtcagtcacttgaaacgctgtgctgtcgagatggatgttcctcctaag
ctgcttcttcaggcagtgcagttgcaggtgtcctcgcttggtgatgcacctcttcagtgt
cccagcaatcaaccaagcgggtcaaagcgaaaaggctcctccaaagaggactcaaagaaa
atgcagaagagggccaaattggagactaaggatgaagatttgctggttgctatggcaatg
tcacgctctctgttggagcaagaaaagcaggaacaagcaaaatcagttacaaatgtgaaa
ccggtggctgctttgccaatcaaatggaagccaggatcagagaaaaaacaacgtaaaaga
ggcccaactgcacctccaccattactgcttcaggacccggagaaggcccgcaaaaggatc
caagagcgagtagctatgctgcttgcagaagaggtggaattccctcccacccctcagctt
cccactagtaggattttggaggatgaatctgggaaagcaacctggctcttgccattgtcc
aaaaccagggagtgctttttatggaatatcagtgcactgacaggaccctatgaccctgaa
tcattctacactgctggattaacccctccaattgtaccttggaagcctgtgcagaaccat
aagccagagaaccttctgccgtcagtgggatctgatcagccaaaagtatcccagcaaatt
cagcctgacctcagttctcatgagcccgcttgcacagaggttggaggccaaacttccgat
gaatccaagtcaggccctgaaggagatgggcagtttttacctcacagccagaaggatgtt
cagaccctgcaggacctagttgagttggccagggaaggacttacccttactcagtggaac
cttgatgttgcccacgttcaggcagcagagcagccaggaaaagaactgacttccagtgat
actccacgtagtggctttgtgccctcgtccaaagagaagagcctactgacgagcagctgt
aaaagatcctctctcaggttgctggctgaagatttcagtgcaatggtcaacaacccccac
ttaagtgatgtccagttccaggtggactgtggggaagtcctttatgcccacatgtttgtg
ttgtacgcacggtgtccacaggccattcaggttgttcacagccaagggttcttagtggag
gaagatgggaacgcgcagacacgccgcgtgctgctgagtgacgtgacaggagaggcggcg
tgtgcattcctgcgatacctttatgctgctgatgctgacatccctgctggggtgctgccc
caggtgggggctctggctgccaggtttggtgtgagggaactgatggcaaagtgtgaaaaa
aacactggagcgagtcaggtgtcttctggagtggattcagaagatgatcttatctctgtg
agggatgacaaagaatgtgaggacagagctgagaacttccaagacctcttgaagtcagtg
tgggttggtgaagatgaggaagaagtagctatgctgaaccctgaatgccagaaggaagat
gacaatagggtgggtgaacaggagctggaggaaatctatgagtttgctgcaactcagaga
aagatggttcaaggtgaaacagaggtgagcgagggaacagactgcagcatctgcagtgat
actgaggcagcccaaggtacaaaccagcaaactgaggaggaagaggtaaagagatctgaa
tctgcttcaataagcaacagcttcaaagatttgagggatgacaatgatgtggaaagatct
aaatgtgactcgtctgcacaagaagagaaaatgcagaatataaataggtgcaaaagcgtg
aatgatccacagaccacttttgtgcctcaccacagtgaacctcaaaaatgggacgtagca
tcccatgatgccactgctaatgaaggagaggctgttaggagatgtgaaggtgtgaaggaa
tccgagtcatctcaggcctcacatgacaaggcacatcactgtgaaaaacagtttcctagc
ttccataatgatactaatataaatgaaagttatgaacgcttattttctgcaactcaggga
gattactgtgagccttccccaatgaaagaagttatcaaagaatcaggaaaggctcccagt
gaaaaacatgctgatgttaatgattcacttctgtacagcaagtcacaaaaagacctctct
ccacataggaacggtttttatgggagtcctcctcccaaaccttatgtgcccctttttcct
gctgttggctcttcacctgcaactccaaaatcagagagaaagtttgccacagaacacgtg
tcaacaccaaagcaaaacaaacaggaaaaatcattcccgtctgatgaaatacactttcag
aaagccaacgagctggatactgcatcaagaaatgagaacacaatttctccagcagagctt
ccccacattgatttaaacaagcatacgtgttgtcatgacccagtgttatcatcactggtt
atcagaactcaggatgctgcagctcaggggaacaaggagggtgatgttattgttttgtct
tctgatgatgaaatggagttacaacaagacaagaagtctccagagtcaggctctgctctg
aagaaaatggaagtgcctgggcaactgaaatgtacaaacgtagaacaaggtcctgagaca
ccaaaacctgaacataactcatcagtcactgaaacagagcagagatcaacccaggtctca
tgtggcattacagatacagtgcatataagtaatgatgtaaagatgtccactgaattgcct
ctcagcagacaaataaatgcttgtacggagagcaaacggagtccaaatctgagccctgaa
aaaaggcttggtcatgaaatgtcttcaggtacagacagctcctggctagtgccagatacg
ccagttctgagcaaaagcaaaagtttctcaacacagactcaggtcacaagtattaattct
ttaaagagtccaggatctaaactcagcacaaagaacttagcagcaggtaacagtaaccat
gaaatgactggaaatttaataaaagtctgtgaaacaacgttgtcagacaaacatttgcct
atggagaactcagtcagtgaaaggagcccttccagcagcccagcagcaggatcattttcc
aagaactccctaccagtttctccaggggatccagttctcctctcccctggccacaccaac
ataaaaagcaaatgtgccaagatctcattttcatccaaacctgtgcctccgtcccatgag
cagtcagtggaagataaaacaaatatcagtgtggttgaggtagaggacagtgaaaaggaa
ataagtctgccttctttgaatagtagcgtcttgctttgtgacgagcccccagtccctgtt
gatgactgctggtatgttgaatatctgtcaccagtcagaggtaatagccaggactctaac
caggtgagccatgcaaagactagcactgccagcagcgccagacctggctcttggcatgac
cagtgggagagcccagtccacatgcaggaaattaagggcagtacccctctccgaggaagt
cctgttcgcagaagaacaactttgctctgtcttgaaaagagtcctattgagccatgttca
tcagtgggcagtagaccgagttacctgaactccaaaatctgggatgactggaatggagaa
gaggaggaagatgaatttccagagatgcttcctctgtctcagaggttgtcagctgcagca
cgtgcctgtcagacagatcctgtaaagactcctgaaccttcctgtcaggagaacaacaag
cctcccagcactccgatgacaccaatgccagcttactccatcatggagaccccagagctg
aagaaggagttgagcagatttggagttcgtgctctcccaaaacgccagatggtgttgaag
ctgaaggagatattccagtatactcaccaggatgtggactctgactttgaggatgaagtc
ccatattcccagcctcccctgcagaagtccccggccaaacgctctaggcagtcaaaggca
gaccggactgcaggtggaaagcgtgccaatgcctcgagagctgtgggcaaaaggaagcag
gttgctatggcttcttcagcgctccctgtggggagggctgatgatgaccttgttggatcc
tgtgaaacaggctgtgcagcacccaaggagggaactgaaacaacacatcacccagaagga
gccaaagagcagaaaaggtcatctgtatctccagagagatggtctctggcagctgatggt
gaggaaccaatgctctcagcatctcaggagtctgcagtttcttcagtggatgaaagcgac
atctcttttggttcacagagttctttcgtgaatggatttgaagcttgtgcttttgcatct
gaggaggaggaagaggagcttccagcatctcaggcagcagctcgggaagaagataagctg
gaggcagtaaggtgctacatccgttcaaacacagccctgtaccacaagattctcttttat
gagccaattgagctggctgacctgcacacagagctgaaacagaatggcattaaaatttcc
aaggcaaagctgctggactttctagatgctcactgtatcacatttaccacagctggagcc
cggaaagagaaggaacagaaaagaaaggggaacaaaaaacagaggagacgatactga
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integrated database retrieval system
