Ciconia boyciana (Oriental stork): 140659186
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Entry
140659186 CDS
T10948
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cboy Ciconia boyciana (Oriental stork)
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cboy01002
]
140659186 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cboy04121
]
140659186 (USP42)
Enzymes [BR:
cboy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
140659186 (USP42)
Peptidases and inhibitors [BR:
cboy01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
140659186 (USP42)
Ubiquitin system [BR:
cboy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
140659186 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Cwp8_D3
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
140659186
NCBI-ProteinID:
XP_072734590
LinkDB
All DBs
Position
13:8682303..8703043
Genome browser
AA seq
1335 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSKKPRTKKMTSRTANLGRVPPAEDPNKVSVEKGPGGAI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTQSCHEEGFCMMCTMETHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDITLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVDLSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGANSKQAGFMGPRLPPHMIKNSSRLNGNGPLKEDPNTVGVTLKRPSS
APPTACVQNWAITRPSITDPSKTQKITISINNKLPARQTVSQPDCLSSAAEDEDLSKPSS
TITNSSAAESTSNPSTMSVATNISKQEVPDEIFVEPAVNGNPKLSTDNAVPYGAETSGKS
EESKGLFKRNCNIISSNGILIGKVVRTLQNSHSSCQNAEEERSQHELPKNESLNGAISLD
NESKENGLKLDDSTCQVQPVKPSEIFFSKTNGLLETMPIALSPVPQEIILESLTYSQLNS
LSEEISVPGPPKSSENDALMETVVMEALFAYEESRKVPSNFSCEVENLFTQSDSETISTK
EEVESITKADNVHPNINGQHKVRKKSLDAEDEFIGQCESEDSRDKDKPRKSKEPELISKE
NPLYIKGSPESEEKLGQTSSIKSDIECSSKKLASLDITDKCQDTKDVSNNYVEVPPVNDS
SITKLDKVLESQFSRENEGLSNKKCEEDKHRKKYKKKIYDSKKTDKEHYRKKRENSDTDE
REKEKQTRSKPDDHSHRRRCSRSVETNRQNRHKQEYCNESKYRSSHNERNSPNNGKSSGK
YSRYRSRSRERTEQDRNRYYHSKGERTWSRERYYQDEPWRWEKCRYYNDYYSSHGTRDGR
ERKSSHCDKDFDKSSQAYNNRSHKDYHCKSRWPHNAPSREEDAHHFSSHRASLHHCSVPQ
QQSEKYSRERHALPPVSAHSNFEDSSRENEKEKLRNGKRKYTHAEGSGSEIEKKCRKIGD
QRMKKYKKVKKKKKSKDKHREKDYKLYDLDFSVLRFDNDNRKRKKKKKKKKHIRKLKGFL
EYLDPRFQKKTREKKEESCPPGGYLCEQYRNQGSKQPYKEGKPSGAGESKKYSSITSNEY
VKDAELTDGSLQYSN
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaaatctaaaaaatcgtcatcaaggcggtct
gacaaatctaagaaaccccgtactaaaaaaatgacgtcacgcaccgcaaatttgggccgg
gtaccacctgcagaagatccaaacaaagtctctgtggagaaaggacccggaggtgctatt
tattgtagatcatctcaaaaatctaagccttttgcccaaagagatctagttgttaatgat
ggaattgccccgccacaaaggattctttttccacctgagaaaatttgtatggattggcaa
caaacacaaagtgttggagttggactgcagaatctcggcaacacatgtttccttaattct
actctacagtgtttgacctacacgcctcctctcgccaattacatgctttctcttgaacac
acccagtcatgtcatgaagaaggcttctgtatgatgtgcacgatggaaactcacattaac
caggtcctatgttgctctaataatgccatcaaacctacatctgttatcaatggccttaaa
agaataggaaaacatttccattttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttgcagaaagcttgcttaaatggaagcaccaaattggacagatcttct
caagccaccacacttatttatcaaatatttggaggatatctaagatcccgagtaaagtgc
ttgaactgcaaagcagtttcggatacatacgagccattcctcgatattactttggatata
aaggcagttacatctgtcaccagagctctagaacaatttgtgaaaccggaacagctggat
ggtgaaaatagctataagtgtagcaagtgtaaaaagatggttcctgcgtcaaagaggtac
acaatacatcgttcttccaacgttctcacaatatcactgaaaagatttgcaaattttact
ggtggaaagatcaacaaggacgtaaaatatcctgaatatttggatcttcgagcatatatg
tcccagtcaattggagaaccactcatctatgctttatatgcagttcttgtacatagtggt
ttcaactgtaacgcaggacactatctctgcttcataaaggctggtaatggactttggtat
cgaatgaatgatgcctcagtagacctttctgatatcaaaacagttctcaatcagcaagct
tatgtacttttttatatcaggcgctatgatttgacacttggagaacgtgctttttactta
ccagcaccgtcttatccccgttcattccttggtcagcggggggctaatagtaagcaggct
ggatttatgggaccacggcttcctcctcatatgattaagaattcaagtcgtttaaatgga
aatggacccctaaaagaggatccaaatactgttggtgtcaccctgaaaaggccatcttca
gctccgccaacagcttgtgttcaaaactgggcaattaccaggccttcaattacagatcca
tcaaaaacccagaagatcactatcagtattaataacaaattgcctgcacgtcagactgtg
tcgcaacctgactgtcttagcagtgctgcggaggatgaggatttaagcaagccttcatcc
acaattacaaattcttcagcagcagagtctacctcaaatccatctacaatgtcagttgct
actaacatttccaaacaggaagttcctgatgaaatttttgttgagccagcagtgaatgga
aatcctaaactcagcactgataacgcagtcccttacggtgcagaaacttcaggaaaatct
gaggagtcgaagggcttatttaaaaggaattgcaacataatatcttctaacggaattttg
attggaaaggtggtccgtacgttgcagaattcccattcttcctgtcagaatgctgaagaa
gaaagatcccagcatgagctgccaaaaaatgaatcactaaatggtgctattagtttagat
aatgaatctaaagaaaatggactgaaacttgatgattccacttgccaagtccaacctgtt
aaaccttctgagattttcttttctaaaacaaacggattgcttgaaacaatgcctatagct
ttgtcgccggttcctcaagaaataatcttagaatctctcacatacagccagttgaacagc
ttgtcagaggaaataagtgtccctggacctccgaaatcttctgagaatgatgctcttatg
gaaactgtagtgatggaagcactgtttgcctatgaagaatccaggaaggttccttccaac
ttcagctgtgaggttgagaatctttttactcaatcagattctgaaaccatttctaccaaa
gaagaagttgaaagtataacaaaagctgataatgtgcatcccaatatcaatggtcagcac
aaggtcaggaaaaaatccttggatgctgaagatgaattcattgggcagtgtgagtctgaa
gatagtagagacaaagacaaaccaagaaaatcaaaagaacctgaactcatttcaaaagaa
aatcctttgtacatcaaagggtctcctgagagcgaagagaaattagggcaaacttcctct
atcaagtctgacattgaatgtagttctaaaaaacttgcatctctagatattacagataaa
tgccaagatacaaaggacgtttctaataactatgtagaggtaccacctgttaatgactct
tctattacaaaactggataaagttttggagagtcaattttctagagaaaacgagggactg
agtaataaaaaatgtgaagaagataaacataggaaaaaatataagaaaaaaatatatgac
tctaaaaaaactgacaaagagcactaccgaaagaagagagaaaactcagacactgacgag
agggagaaggagaagcaaaccagaagcaaaccagatgatcattcccacaggaggaggtgc
tctcgcagcgtagaaacaaataggcaaaatcgtcataagcaggaatattgcaatgaaagc
aagtacagatcttcccataatgaaagaaacagcccaaataatggcaagagctcaggaaaa
tattctcgttatagatcccgaagcagagaaagaacagaacaagacaggaacagatattat
cattccaaaggagagagaacttggagcagagaaagatactatcaagatgaaccgtggaga
tgggaaaaatgcagatactacaatgattattattcctctcatggaacaagagatggtaga
gagagaaagtcctctcattgtgacaaagactttgacaaatcgagtcaagcttacaacaac
aggtcacataaggattatcactgcaaaagcagatggcctcacaatgcaccctctagagag
gaagatgcacatcactttagcagccacagagcaagcttacatcattgttccgtacctcag
cagcaatctgaaaaatattctcgtgaaaggcatgcacttccacctgtgtcagctcattca
aattttgaggactcttcccgggaaaatgaaaaagaaaaactaagaaatggcaaaagaaaa
tatacccacgcagaaggaagcggaagcgaaatagaaaagaaatgccgaaagataggtgac
caaagaatgaaaaaatacaagaaagtcaagaagaaaaagaagtccaaagataaacatcga
gagaaggattacaaactttatgatttggatttctctgtgctccgctttgacaatgacaat
cgcaaacgtaagaaaaagaagaaaaagaagaaacacatcaggaaactgaaaggcttcttg
gaatatttagatcctcgtttccagaagaaaacacgggagaagaaggaagaatcctgtcct
ccaggcggctatttatgtgagcaatacagaaaccagggcagtaaacaaccctacaaggaa
gggaagccttccggtgcaggtgaaagcaagaaatacagctccatcacatctaatgagtat
gttaaagatgcggagcttactgatggaagccttcaatactcaaactaa
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integrated database retrieval system
