Ciconia boyciana (Oriental stork): 140659244
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Entry
140659244 CDS
T10948
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cboy Ciconia boyciana (Oriental stork)
Brite
Messenger RNA biogenesis [BR:
cboy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140659244 (TNRC6A)
Chromosome and associated proteins [BR:
cboy03036
]
Eukaryotic type
Gene silencing
piRNA pathway
140659244 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
140659244
NCBI-ProteinID:
XP_072734731
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All DBs
Position
13:complement(914773..968446)
Genome browser
AA seq
1906 aa
AA seq
DB search
METNTTFCSRELEAKATKEVERKLSRAFLPHLCGTERRDLVQEEEEQLMEERKKRKEDKK
KKEAAQKKAIEQKIKVPEQTKTSVSQPQPVTSNGTSTVTSTNNNAKRATANSQQQQTLPR
YPPREVPPRFRHQEQKQLLKRGQQLPVIAANLGSTPKVLNGQSGGSTVTNKQPVTNGEVP
NSSKKQPGMPPIRDLVSHSPNQSDLNHSGLGSHYENSHWGPVSSNSDSSTNWDKVIVDGS
DKEAWPSITGSDPELTSECMDTDSASSSGSERNLVIMASGSTGGENDGIRNGIGHGSQNK
FVVGSNSNNVGNGSINGPWGLSHGTIISTCQVSVDAPDSKSESSNNRMNAWGTINSSSNG
GLNPSTLNSNGNHGAWPVLENNGHALKGSVGSGNPGTNIQCSTIGQISNSQSINSKVGGS
AHGSWGSLQENCDSEVNGTRKVSFSGQPQNLNTEMNGPNNTTNFMTSSLPNSAGSVQINE
LPNNTGHGAWRVSTMNHSQIQASPVTNGTSISHLSNGETKNGGSYGTTWGAYGSNYSGDK
CSGPNSQANGDTVNATLMQPGISGPGSTNFQINGNKGGGVWEAGTVNSQNMPWGSGNGAS
AGGSRRGWGNPAQNTGTNISNGEWSKLPSNQHSNESVNGNSRKFTNGWKSTEEDDLNSQS
SAASQITEQNSAWAKTGTGDSEGSSESTGCHEDRVTTEGQNRERRKVDQHALLQSIVNRT
DLDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGGSVTQTSSSGGCVDRPS
PNNNDTSSVSGWGDPKSATRWGDSKGSNSQGGWEEDSAATVMVKSNQSWGSGKEEKSSWN
DAQKIKQGWVDGQKASQGWAVSAGDSWGENSRSNHWGEAKKSSSGGSDSDRSVSGWNEPG
KSNSVTWGGNNTNANNSSGWDEPAKSNQNQGWGDPPKSNQPQGWGDSSKPINSPEWNKQD
VGSWGAPSATSKPPGSGWLGGPMPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPS
KYNYKNVNMWNKNVPNSSSSSDQQAQVHQQLLSSSAMSSKESSSGSGWGEPSTPATTVDN
GTSAWGKPMDTGTSWGEPISDAAGTSGWGNASLGQQASNKPGPKSMQDSWCGDDMPLTGS
RQTSWEEEEDVEIGMWNSSSSQEANPSLNWPPYMKKMPTKGIMKGGNKQDEAWINPFIKQ
FTNLSFSRESPEETIQSNKMDMSGGLLQDKRMEMDKHGLNVGDYNRVVGKGPGSRPQISK
ESSMDRGPYFDKNGNPSMFGVGNIAAQPRSMQQPPAQPLNSSQPNPRAQVPPPLLSPQVP
VSLLKYAPNNGGLSPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQKAQNQRSMPSGG
RQQQEQQGRSLSMQQQMMQQSRQLDPNLLMKQQTPPSQQQSLHQPTMKSFLENVIPHATP
ELQKGPSPINAFSSFPIGMNSNLNVNMDMSSIKEPQSRLRKWTTVDSISVNTSLDQNSSK
HGAISSGFRLEESPFVPYDFMNSSNSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGE
PWKGYPNIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSI
RASNYNVSLSSTAQSTSVARNSDSKSTWSPGSVTNTSLAHELWKVPLPPKSITAPSRPPP
GLTGQKPPLSTWDNSLRLGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGST
LRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEI
SRFFAQGQSLTPSPGWQSLGSSQNRLGSIDGSHSFSNRNDLNHWNGAGLSGTSSGDLHGT
SLWGSPNYSTSLWGTPSSNDTRGISSPSPINAFLSVDHLGGGGESM
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaacaccactttctgttccagagaattggaagctaaagctaccaaagaagtc
gaaagaaaactaagcagggctttcctgcctcatttatgtggaactgagagaagggattta
gtgcaagaagaggaagaacagttgatggaagaaaggaaaaagagaaaagaagacaagaag
aagaaggaagctgctcaaaaaaaggccattgaacaaaaaatcaaagtgccagaacaaaca
aagacaagtgtaagccagcctcagcctgtcacctctaacggcacttccacagtaaccagc
actaataataatgccaagcgggccacagccaacagtcagcagcagcagaccttgcctcga
taccctcctcgtgaagtaccaccgcgatttcgacaccaggaacagaaacagcttctgaaa
cgaggtcagcagttaccagttatagctgcaaacctgggatctactcctaaagtattaaac
ggccagtcaggaggcagcactgtcacaaataaacagccagtgaccaacggagaagtgccg
aacagcagcaaaaaacagccaggcatgcctcccattcgggacttggtgagccactcccct
aaccagtcagatctgaaccacagtggtctaggatcccattatgaaaattctcactgggga
ccagtctcttcaaatagtgactccagcacaaactgggataaagttattgtagacggctct
gacaaagaagcatggccatcaatcactggcagtgacccagagttgacatcagaatgtatg
gacactgactctgcctctagctctgggtcagagagaaacctcgttataatggcttcaggg
agcacaggtggtgaaaatgatggcattcgaaatggcattggacatggttctcaaaataag
tttgtggttggtagcaacagcaataatgtgggcaatggaagtattaatgggccgtggggt
ttatcccatggaaccataataagcacatgtcaagtttctgtggatgctcctgacagcaaa
tctgaaagtagcaacaatagaatgaatgcttggggcaccataaactcttcatcaaatgga
gggttaaatccaagcactttgaattcaaatggcaaccatggtgcctggcctgtattggag
aacaatggacatgccctgaaagggtctgtagggagtggtaatcctggcacaaatattcag
tgcagtaccataggtcagatatctaatagtcagagtattaactctaaagtgggtggttca
gcccatggttcctggggaagccttcaggaaaattgtgattctgaagtaaatggtacaagg
aaggtttcattcagtgggcaacctcaaaaccttaacactgaaatgaatggaccaaataac
actactaactttatgacctctagtttaccaaactctgctggttcagtgcagattaacgaa
ctgcctaacaatacagggcatggggcctggcgtgtgagcacaatgaatcattctcagatt
caggcctctccagttacaaatggcacttccatttctcatcttagcaatggtgagacaaaa
aatggtggatcttacggtactacatggggtgcctatggttctaattactctggagacaaa
tgttcaggcccaaacagccaagctaatggtgacactgtgaatgcaactctaatgcagcca
ggcattagcgggcctggcagcactaactttcaaatcaatgggaataaaggaggaggggta
tgggaggcagggacagtcaactcccagaatatgccatggggaagtggaaatggtgccagt
gctggcgggagtagaagaggatggggcaaccctgcacaaaacactggcactaacatttca
aacggcgaatggagtaaactgcctagtaatcagcattccaatgaaagcgtgaatggaaac
agcaggaagtttacaaatggatggaaatctactgaggaggatgaccttaacagccagagt
tctgctgcttctcagataactgaacagaacagcgcatgggccaaaacaggtacgggggac
agcgaaggtagttcagagagcactggatgccacgaagacagagtaactacagaaggacag
aatcgagagaggaggaaagttgaccagcatgcattactccaaagtatagtgaacagaact
gacttagatccacgcgtcctttccaactctggttggggacagactccaatcaaacagaac
actgcctgggataccgaaacatcaccaaggggtgaaagaaaaactgacaatgggacagag
gcctggggaggctctgtgacacagacttccagctcagggggatgtgtggatagacctagc
cctaacaataatgatacctcatctgtatcagggtggggagatccaaagtctgctacaagg
tggggagactccaaagggtcaaacagccaaggggggtgggaagaagattctgctgctaca
gtaatggtcaagagcaatcaatcgtggggaagtggcaaagaggaaaagtcatcttggaat
gacgcacagaagatcaaacagggatgggtagatggacaaaaggccagccagggatgggca
gtttctgctggtgacagctggggcgaaaactcaagaagtaaccattggggtgaggctaag
aaatccagttcaggaggtagcgacagtgacagatcagtatctggttggaatgagccaggt
aaatcaaattctgttacttggggaggtaataatacaaacgcaaataattcttcaggatgg
gatgagcctgcaaagtctaatcagaaccagggctggggagaccctccgaaatccaatcag
ccccaaggttggggggattcatccaagccaatcaactctccagaatggaacaaacaagac
gttggctcttggggagcaccatctgccacaagcaaacccccagggtcaggctggctgggt
ggacccatgccggcaccagcaaaggaggaagagcccactggctgggaggagccgtcccct
gaatcaatacgccgtaaaatggaaattgatgatggaacttctgcttggggtgatccaagc
aaatacaactacaaaaatgtgaatatgtggaataaaaatgtcccaaacagtagcagcagt
tcagaccagcaagcacaggtacatcagcagctactgtcttcaagtgccatgtctagcaag
gagagcagttcgggttctggttggggagagccttctactccagccactactgtagataat
ggaacttcagcgtggggtaaacccatggatactggtactagctggggagaacccatcagc
gatgcagcaggcacctctggctggggaaacgcttctcttggtcaacaggcttcaaataaa
cctgggcctaaatctatgcaagatagttggtgtggagatgatatgccattgacaggcagt
cgtcagaccagctgggaggaagaggaggatgtagagattggaatgtggaacagcagttct
tcacaagaagctaacccgtctttaaattggccaccatatatgaaaaaaatgcccacaaag
ggaataatgaaaggtggaaataagcaagatgaagcatggatcaatccattcattaagcaa
ttcacaaatctcagtttttcaagagaatcaccagaagaaaccatacagagcaataagatg
gacatgtctggagggttattgcaagataagcgaatggagatggataagcatggcctcaat
gttggagattacaaccgtgtggttggaaaaggccctggttctcgtcctcaaatttccaaa
gagtcttccatggatcgcggtccttactttgataagaatggcaatcccagtatgtttggt
gttggtaatatagcagcacagcccaggagcatgcagcagcctccagcacaacctcttaat
tcatctcagcctaatccacgtgctcaagtgcctcctccattactatcccctcaggttcca
gtatcattactgaagtatgcaccaaacaacggtggcctgagcccactttttggcccacaa
caggtagccatgttgaatcaactgtcccagttaaaccagctttctcagatctcccagtta
cagcggttgttggctcagcagcaaaaagcgcagaatcaaagaagcatgccttctggtggt
cgtcaacagcaggagcagcagggtcgatctcttagtatgcagcaacagatgatgcaacag
tcccgccagcttgatccaaacctgttaatgaagcagcagactccaccctctcaacagcag
tcactccatcaacccactatgaaatctttccttgagaatgtcataccccatgctactcct
gagctacaaaaagggccatcgccaataaacgcattcagcagcttccctataggaatgaac
tcaaacttgaatgtaaacatggatatgagcagtattaaagagccacaatctcgattgagg
aaatggactacagtagacagcatttctgtgaacacatcattagatcaaaactccagcaaa
catggtgctatttcaagtggttttaggctggaagagtctccgtttgttccatatgacttt
atgaacagcagtaattcaccagccagtcctcctggatctattggggacggctggccccgt
gccaaatcgcctaatggctctagcagtgttaactggccaccagagtttcgtcctggcgag
ccatggaaaggttatccaaacattgaccctgaaactgacccttacgtcactcctggcagt
gtcataaacaatctttcaattaatactgtgcgggaagttgaccacctcagggacaggaac
agtgggtcatcctcatctttgaacaccacgctgccttcaactagtgcctggtcatccatt
cgtgcctccaactacaatgtttccctcagcagtacagcacaaagcacttcagtagccaga
aacagtgattccaaatcaacatggtctcctggatcagtcactaacacctctctggctcat
gagctgtggaaggtccctttgccacctaaaagcatcactgctccgtcccgcccacctcca
gggctaacaggccagaaaccaccgttgtccacttgggataattcccttcgtttgggtgga
ggatggggaaattctgatgccagatatacccctggttcaagctggggtgagagcagctca
gggagaataacaaattggcttgttctaaaaaaccttacacctcagattgatggctcaacc
ctgcgtactctgtgcatgcagcacggtccactaataacattccaccttaacctcccacat
ggtaatgctttggtccgttacagttcaaaagaagaggtagtgaaggcacaaaaatctctg
cacatgtgtgtattagggaacactactattcttgctgagtttgccagtgaagaggagatt
agtcgcttctttgcacaaggccagtctctgactccgtctcctggctggcaatctctcgga
tccagccagaaccgacttggatccattgatggttcccattcgttctcaaaccgtaatgat
ctaaatcactggaatggtgctgggctgtcgggaactagcagtggagaccttcatggcact
tcactttgggggagccccaactattccacgagcctgtggggcaccccgagcagcaatgac
accaggggaattagcagcccatcccccatcaacgctttcctttctgttgaccacctaggt
ggaggtggagagtccatgtaa
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