Ciconia boyciana (Oriental stork): 140659374
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Entry
140659374 CDS
T10948
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140659374 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cboy03041
]
140659374 (PRPF6)
Spliceosome [BR:
cboy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
140659374 (PRPF6)
Complex C
U5 SnRNP specific factors
140659374 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_17
TPR_2
TPR_8
ARM_TT21_2nd
FAT
TPR_CcmH_CycH
TPR_1
T7SS_EccA1_N
ARM_TT21_C
ARM_TT21_5th
TPR_21
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
140659374
NCBI-ProteinID:
XP_072735077
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All DBs
Position
14:2084446..2109318
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AA seq
941 aa
AA seq
DB search
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQTADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQSGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAIMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER
ARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQIEE
QKELVEKAREAYNQGLKKCPHSIPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPDLW
LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHD
PHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
CENAEPRHGELWCDVSKDIENWQKKIGEILVLVAAKLKNTF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagaagaagccgttcctgggcatgcccgcgcccctgggctacgtgccgggg
ctgggccgcggagccacaggtttcaccacccgctctgatatcggccctgcccgtgatgcc
aatgaccccgtggatgatcgtcatgctccgccggggaagagaactgttggggatcagatg
aaaaagaatcagacggctgacgatgatgatgaagatttgaacgacactaactatgatgag
ttcaatgggtatgctgggagcctgttctcaagcggtccctatgaaaaagacgatgaggaa
gcagatgctatttatgcagctttggataagaggatggatgaacgcagaaaagaaagaagg
gaacaacgagaaaaagaggaaatagaaaaataccgtatggaacgacccaaaattcagcag
cagttctcagacttgaaacggaagctagcagaggtcacagaagaagagtggctgagtatt
ccagaagttggtgatgccaggaacaagcgtcagaggaatcctcgttatgagaagctgact
cctgtacccgacagcttctttgcaaagcatttacagtcgggggagaatcacacttctgtg
gacccacgccaaacgcaatttggcggattgaatactccgtatccagggggattgaatact
ccgtacccaggaggaatgacaccaggcttaatgacacctgggacaggcgaattggatatg
aggaagattggccaagccaggaacaccttgatggatatgaggctaagccaggtgtcggac
tctgtgagtggccagactgtagtggacccgaaaggatatttgacagacttgaattcgatg
attcccacgcatggaggagatatcaatgatatcaagaaagcccgtttgctcctgaaatct
gtacgagagaccaatcctcatcatccgccagcctggatagcatcagcccgactggaggag
gtcactggcaaactccaggtggctcgaaacctcatcatgaaaggaacggagatgtgcccc
aagagtgaagatgtttggttagaagctgctcggcttcagcctggggatacagccaaggct
gttgtggcccaagctgtccgccaccttccgcagtctgtccgaatctatataagagcagca
gagctggagacagatatccgtgcaaagaaacgcgtccttaggaaagcccttgagcatgtt
ccaaattcagtgcgtttgtggaaagcagccgtggagttagaagaacctgaggatgccagg
atcatgctgagtcgggctgtggagtgctgtccgactagcgtagaactgtggcttgcgctg
gcaaggctggagacatatgagaatgctcgtaaagtccttaacaaagcccgtgagaatatt
ccaacggatcgtcacatctggattactgctgccaaactggaggaagccaatggaaacacc
cagatggtggagaaaataattgacagagccatcacttctcttagggctaatggcgtggaa
atcaacagagagcaatggatacaggatgctgaggaatgtgataaagctggaagtgtggcc
acgtgccaggcaatcatgcgagctgtgattgggattgggattgaggaagaagatcggaaa
catacctggatggaagacgcagacagttgtgttgctcataatgccctggagtgtgcccga
gcaatttatgcctatgccttgcaagttttcccgagcaagaagagcgtgtggctgcgagca
gcatacttcgaaaaaaaccatggaacgagagaatccttggaggctcttttgcagagagcc
gttgctcactgtcccaaagcagaagtgctctggctcatgggagccaaatcgaagtggctg
gcaggagatgtgccagcagccagaagcattttggccctggctttccaggccaaccccaac
agcgaggagatctggctggctgccgtgaagctcgaatcagaaaacaatgagtatgaaaga
gcaaggaggctgctggcaaaagctcgcagcagtgcccccactgcaagggtcttcatgaag
tctgtgaagttagaatgggtgcttgggaacattgctgcagcccaggagctttgtgaggaa
gccctgaagcactatgaggacttccccaaactgtggatgatgaagggacaaattgaggaa
caaaaggagctggtagagaaagcacgggaggcttacaatcaagggttgaaaaagtgtccc
cattccatacccctgtggcttttgttgtccagactggaggagaaagttgggcagttgact
agagcaagagccatcttggaaaagtctcgcctaaagaatccaaagaacccagatctctgg
ttagagtctgtgcgattagagtacagagctgggttaaagaatattgcaaatactctgatg
gccaaagcattgcaagaatgccccaattcaggaatcctgtggtcagaggcaattttcctt
gaagcgcgaccacaacggaagaccaagagtgtggatgctctcaagaagtgtgaacatgac
ccacatgtcctgttggctgtggccaagctgttctggagcgagcgaaaaataaccaaggcc
agagagtggtttcaccgaacagtgaagatcgactctgacctgggggatgcctgggctttc
ttttacaaatttgagctccagcatggcacagaggaacaacaagaagaggtgaggaagcgc
tgtgagaatgctgaacctcgccacggagagctctggtgtgatgtctccaaggacatagag
aattggcagaagaagatcggcgagattctcgtgcttgtggcagccaagcttaaaaatacc
ttctag
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