Ciconia boyciana (Oriental stork): 140659665
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Entry
140659665 CDS
T10948
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03250
Viral life cycle - HIV-1
cboy04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
140659665 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
140659665 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cboy03400
]
140659665 (SAMHD1)
DNA repair and recombination proteins [BR:
cboy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
140659665 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
Pdc1_Ge1
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
140659665
NCBI-ProteinID:
XP_072735642
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All DBs
Position
14:complement(17233470..17262755)
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AA seq
685 aa
AA seq
DB search
MSFGSTFVEADVCDRAGIWDDEQALLVLVSRRGAALAADVTAAPVPPAPSGAGAAPARRR
RRRDGEPGGGGGGGGGWGAAPAKRARREGSPEGPRSPAAESDRCDPWLWDTERLCQHLSR
CGVGDPSLLRRFRESGVTGSMLLDLPACALEVTRVCLPAERLAVLACLNTLRQQHVDVMK
VFNDPIHGHIEIHPLLVRIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSIGVGYLAG
CLVRALKERQPELDITQRDILCVEIAGLCHDLGHGPFSHMFDGRFIPLTRPDLKWKHETA
SVEMFEHLITSNKLEEVMKSYGLVLEEDMNFIKEQIGGPIDETACEKSWPYRGRQKEKSF
LYEVVANKKNGIDVDKWDYFARDCHHLGIRNNFDYNRLLKFTRVCEVENQKHICTRDKEV
GNLYDMFHTRNCLHRRAYQHKIGNIIEIMITEAFQKADKFFKIEGSGGKLYQISTAMEDM
EAYTKLTDNIYLEILHSSCPELKEAREVLHKIERRELYKFLGETQPETKGEIVKNSGLAE
SIANSKPEKNPPDVELKAEDFIIDVINMDYGMKEQNPIDKVLFYCKADPSKAVKISKEQV
SKLLPMTFAEQVIRVYCKSQDPNIVSAAKQYFIQWCIEKDFTKPQDSDVVAPHLTPMKKS
WNNMRDDEHQTASEPSCKQRLPFNK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgggagcaccttcgtggaggctgacgtttgtgaccgagctgggatttgggat
gatgaacaggccttgctggtgctggtttccaggcggggggcagcgctggctgctgacgtc
accgcggcgccggtcccccccgcgccgagcggagcgggcgctgcgcctgcgcggcggcgg
cggcggcgggatggggagcccggcggcggcggcggcggcggtggggggtggggagcggct
cccgccaagcgggcgcggcgcgagggctcccctgaggggccccgcagccccgcggcggag
agcgaccgctgcgacccgtggctgtgggacacggagcggctctgccagcacctctcgcgc
tgcggcgtgggcgatcccagcctgctgcgccgcttccgagagagcggagtcaccgggagc
atgctgctggacctgccggcctgcgccctcgaggtcacccgcgtctgcctcccagccgag
agactggcagtgctggcctgcctgaacacactgcgacagcagcacgtggacgtaatgaag
gtttttaacgatccaattcatgggcacattgaaatacatccccttcttgttcgtatcatc
gacacacctcagtttcagcgcctccgatacattaagcagctgggtggcacttactttgtt
tttccaggagcctctcacaaccgctttgaacactctataggggtcggctacctcgcagga
tgtctggttcgtgccctgaaggagagacaaccagaactggatataacccagcgagatatc
ctctgtgtagaaattgctgggctttgtcatgatttgggtcatgggccattttcacacatg
tttgatggaagatttattccactcactcgtccagatttgaagtggaagcatgaaactgct
tctgttgaaatgtttgagcacctgatcacctccaataaactagaagaagtcatgaagtca
tatggtcttgtcctggaagaagatatgaacttcatcaaggaacaaataggagggcctata
gatgaaaccgcttgtgagaaatcgtggccctaccgtggtcgacaaaaggagaaaagtttc
ctatatgaggtagtagctaacaaaaaaaatggcattgacgttgacaaatgggattatttt
gcaagggattgccatcacctaggaatccgcaataattttgattataaccgattacttaaa
ttcactcgggtctgtgaagtagaaaaccagaagcatatctgtacccgtgacaaggaagtt
ggaaatttgtatgatatgttccacacacggaattgcctgcaccggcgagcataccagcat
aagattggcaacatcattgaaataatgattacagaagcctttcaaaaagcagacaaattt
tttaaaatagaaggctctggaggaaaactgtaccagatttctacagcaatggaggacatg
gaagcctacactaagctaactgataatatctacctggaaattctgcactcaagttgtcca
gaactgaaggaggcacgagaagttttgcataaaatagaacgacgtgaattatacaagttt
ttaggagagacacaacctgaaacaaagggggaaattgtaaagaatagcggcctggcagaa
agcattgctaattccaagccagaaaagaatcctccagatgtggagctaaaggctgaagat
ttcataattgatgttatcaatatggattatggaatgaaagaacagaatcccattgataag
gttctcttctattgcaaggctgatccttccaaggcagtcaagatcagtaaggaacaggtt
tcaaagcttttacccatgacgtttgcagagcaggttatccgggtttattgcaaaagtcag
gatccaaatattgtttcagctgcaaaacagtattttattcagtggtgtatagagaaggat
ttcaccaaaccacaggatagcgatgtggttgcccctcatctgactccaatgaagaaaagc
tggaataacatgagagatgatgaacaccagacagcttcagaacccagctgcaaacaaagg
cttcctttcaataagtaa
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