Ciconia boyciana (Oriental stork): 140659763
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Entry
140659763 CDS
T10948
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cboy Ciconia boyciana (Oriental stork)
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cboy03009
]
140659763 (DDX55)
Enzymes [BR:
cboy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140659763 (DDX55)
Ribosome biogenesis [BR:
cboy03009
]
Eukaryotic type
Pre-60S particles
Helicases
140659763 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
140659763
NCBI-ProteinID:
XP_072735911
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All DBs
Position
15:10243703..10252302
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AA seq
597 aa
AA seq
DB search
MEAVTEGSWESLPVALSPGVLQALRELDFARMTPVQSATIPLFMNNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKMQVGAIIITPTRELAIQIDEVLSHFTKHFPRFSQILLIGG
RNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMG
FEASLNAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASNTQKTPT
RLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESLIKQVKIMSIH
GKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTA
RIGNVGSALVFLLPMEESYINFLSINQKCPMQEMKLQTNVLDLLPKLKSMALADRAVFEK
GMKAFVSYIQAYAKHECNLIFRIKDLDFASLAKGFALLKMPKMPELRGKCFPDFTPVTVN
TDSISFKDKNREKQRQKQLEQQRKEREENGGKKKFIKNKAWSKQKAKREKKKKITAKRKR
EEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKRLTGSQSRVKAETVADLESEG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgactgaggggagctgggagtcgctgcccgtggcgctgagtccgggcgtg
ctgcaggccctgcgggagctcgacttcgcccgcatgaccccagtgcagtctgcaaccatc
ccactgttcatgaataacaaagatgttgctgcagaagcggtaacaggcagtggcaaaacc
ttagcatttgtaattcccatactggaaattcttctcagacgggaagaaaaattaaagaaa
atgcaggttggagctataattatcacaccaacgagagaattagctattcaaattgatgag
gtgctatcacacttcacaaaacacttccccaggtttagtcagattcttttaattggtggt
aggaatcccatggaagatgttgaaaagtttaaagaacatggtgggaacatcattgtagct
acaccaggccgcttggaggatctgttcagaagaaaagcagatgggctggatctggcaagt
tgtgtgaagtctcttgatgtgttggtattagatgaagcagacagacttctagatatgggc
tttgaagcaagtttaaatgccattctggactttttgcccaagcagagacggacaggtctg
ttctcagcaactcaaactcaagaggtggagaatctggtgagagcaggtctccggaatcct
gtccgcatctcagtgaaagagaagggagtggcagcaagcaacacacagaaaactccaacg
cgcctggagaactattatatgatctgcaaagcagatgaaaaatttaatcagttggtgcat
tttcttcgacagcacaaacaggaaaaacatctagtctttttcagcacatgtgcctgtgtg
gaatactatgggaaggctttggaatccttaattaaacaagtgaaaataatgagcattcat
gggaaaatgaaacacaagcgtaacaagatttttaccgagtttcggaagctcccaggtggc
attttagtgtgcactgatgtgatggctcgtggcatagacattccagaagtacactgggtt
ttacagtatgacccacctagcagtgcaagcgcctttgtgcatcggtgtggtcgaacagca
cggatcggcaatgtaggcagtgcacttgtatttttgcttcccatggaagaatcttacatt
aactttctctcaatcaaccaaaagtgtcccatgcaggaaatgaaactgcagacaaacgtg
ttggatcttcttccaaaactgaagtctatggccctagctgacagggcagtgtttgagaaa
gggatgaaagcatttgtgtcttacatccaggcttatgccaaacatgaatgtaatctgatc
ttccgaataaaagatctggattttgctagccttgccaaaggttttgcgttgttaaaaatg
ccaaagatgcctgaactaagaggaaaatgttttccagactttactccagtcactgttaat
acagactccatttcatttaaggataaaaacagagaaaagcagagacaaaagcaattagaa
cagcaaagaaaagaaagagaggaaaatggagggaaaaagaaattcataaagaacaaagcc
tggtcaaagcagaaagccaagagggagaagaaaaagaaaataacagctaaaaggaagcgt
gaagagggctctgatattgaagatgaggatatggaagagttgctgaatgacacaagactc
ttgaagagattaaaaaaaggaaaaattagtgaagaagagtttgagaagagactaacaggc
agccagagtagagtcaaagcagaaactgttgctgacttagagtctgaaggttga
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