Ciconia boyciana (Oriental stork): 140660163
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Entry
140660163 CDS
T10948
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03008
Ribosome biogenesis in eukaryotes
cboy03013
Nucleocytoplasmic transport
cboy03015
mRNA surveillance pathway
cboy05164
Influenza A
cboy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140660163 (NXF1)
03015 mRNA surveillance pathway
140660163 (NXF1)
03008 Ribosome biogenesis in eukaryotes
140660163 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
140660163 (NXF1)
05168 Herpes simplex virus 1 infection
140660163 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cboy03019
]
140660163 (NXF1)
03009 Ribosome biogenesis [BR:
cboy03009
]
140660163 (NXF1)
Messenger RNA biogenesis [BR:
cboy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140660163 (NXF1)
mRNA cycle factors
Stress granule specific factors
140660163 (NXF1)
Ribosome biogenesis [BR:
cboy03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
140660163 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_4
UBA_8
Motif
Other DBs
NCBI-GeneID:
140660163
NCBI-ProteinID:
XP_072736797
LinkDB
All DBs
Position
16:complement(14998292..15007688)
Genome browser
AA seq
615 aa
AA seq
DB search
MAEEGKGGYSEHDDRVGGRGFPGRRKKGRGPFRGKMYSEMNHRSRSRGGPGLRARLEEDD
GDVPMSEAHDGPRNRYLPYGPRPNRTANIHITVRRDLPAPERSSGTSRDGGRRNWFKITI
PYGKKYDKSWLLSSIQNLCSVPFTPVEFHYDHNRAQFYVEDATTASALKQVSRKITDRDN
YKVVIIINSSAPPQSLQNELKPEEIEQLKLCMSKRYDGSQRALDLKSLRVDPDLVSQSID
VVLNQRSCMLVVLRIIEENIPELQSLNLSSNKLYRLDDLSELAQKAAGLKILDLSRNELK
SDRELDKVKGLKLEELWLDGNPLCDAFRDQSTYISSVRERFPKLLRLDGHDLPPPIAFDV
EAPTTLPPCKGSYFGSDDLKVLVLRFLQQYYSIYDSSDRQGLLDAYHDGACCSLSIPFGP
QNPPRNSLNEYFKDSRNVKKLKDPTMRFKLLKHTRLNVVAFLNELPKTQHDVNSFMVDIC
AQTNTLLCFAVHGIFKEVDGKSRDSVRAFTRMFIAVPAGNTGLCIVNDELFVRNATTEEI
RKAFLMPAPTPSSSPVPTLSAEQQEMLAAFSMQSGMNLEWSQKCLQDNDWDYGRAGQVFT
QLKLEGKIPEVAFLK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagggcaaaggcgggtacagcgagcacgatgaccgtgtgggcggccgaggt
ttccccggccgcaggaagaagggtcgcggcccgttccgcgggaagatgtacagcgagatg
aaccaccgttcccgtagccgcggcggccccggtttgcgcgcgcggctggaggaggacgac
ggcgacgtccccatgagcgaggcccacgacgggccccgcaaccgatacttgccctacggc
ccgcggccgaaccgcacggccaacatccacatcacggtcagacgggatcttcccgccccg
gagcggagcagcggcaccagccgcgacggcgggcgcaggaactggttcaagatcaccatc
ccgtacgggaagaaatacgacaaatcctggctgctgagctccatccagaacctctgcagc
gtccccttcactcccgtcgagttccactacgaccacaaccgggcgcagttctacgtggag
gacgccaccaccgccagcgccctcaagcaggtctcccgcaagatcaccgacagggacaac
tacaaggtggtgataattatcaattcctcggctccgcctcagtccttgcaaaacgagctg
aaaccggaggagattgagcaactgaagctctgcatgagcaaaaggtacgatggctcgcag
cgggcgttggacctcaaaagcctccgcgtcgacccggatttggtgtcgcagagcatcgac
gtggtgctgaaccagcggagctgcatgctggtcgtgctgcgcatcatcgaggagaacatc
cccgagctgcagtccctcaacctgagcagcaacaagctctaccgcctggacgacctctcc
gagctggcccagaaagccgccggcctcaagatcctcgacctctctcgcaacgagctgaaa
tcggaccgggagctggacaaggtgaaggggctcaaactggaggagctttggctcgacgga
aacccgctctgcgacgccttccgggaccagtccacctacatcagctccgtccgagagcgc
ttcccgaagctgctgcggctggacggccacgatctccctccacccatcgccttcgacgtg
gaggcccccacgacgctgcccccctgcaagggcagctacttcggctcagacgacctgaag
gtcctggtgctgcggttcctccagcagtattattccatctacgactccagcgaccggcag
gggctgctggatgcgtaccacgacggcgcctgctgctccctcagcatccccttcgggccc
caaaacccccccaggaacagcctgaacgagtattttaaggacagcagaaacgtcaagaag
ctgaaagaccccaccatgcgcttcaagctgctcaagcacacgcggctcaacgtggtggcc
ttcctcaacgagctccccaagacccagcacgacgtcaactccttcatggtggacatctgc
gcccagacgaacactctgctgtgcttcgccgtccacgggatcttcaaggaagtggacggc
aaatcccgagactcggtgcgcgccttcacccgcatgttcatcgccgtgccggccggcaac
accgggctctgcatcgttaacgacgagctcttcgtccgcaacgccaccaccgaggagatc
cgcaaggccttcctcatgccggcgcccaccccctcctccagccccgtgcccacgctctcc
gccgagcagcaggagatgctggccgccttctccatgcagtcgggcatgaacctggagtgg
tcccagaagtgcctgcaggacaacgactgggactacggccgggccgggcaggtcttcacc
caactcaagctggaagggaagatccccgaggtggcgtttctcaagtga
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