Ciconia boyciana (Oriental stork): 140660902
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Entry
140660902 CDS
T10948
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03030
DNA replication
cboy03420
Nucleotide excision repair
cboy03430
Mismatch repair
cboy03440
Homologous recombination
cboy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140660902 (RPA1)
03420 Nucleotide excision repair
140660902 (RPA1)
03430 Mismatch repair
140660902 (RPA1)
03440 Homologous recombination
140660902 (RPA1)
03460 Fanconi anemia pathway
140660902 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cboy03000
]
140660902 (RPA1)
03032 DNA replication proteins [BR:
cboy03032
]
140660902 (RPA1)
03400 DNA repair and recombination proteins [BR:
cboy03400
]
140660902 (RPA1)
Transcription factors [BR:
cboy03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
140660902 (RPA1)
DNA replication proteins [BR:
cboy03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
140660902 (RPA1)
DNA repair and recombination proteins [BR:
cboy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
140660902 (RPA1)
MMR (mismatch excision repair)
140660902 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
140660902 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF4939
CATSPERD-E_C
RADX
Motif
Other DBs
NCBI-GeneID:
140660902
NCBI-ProteinID:
XP_072738387
LinkDB
All DBs
Position
17:6910826..6933704
Genome browser
AA seq
616 aa
AA seq
DB search
MSVRLSEGAIAAIMQGQYVPKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQ
LNSLVEEEHLSAQCICQVNRFIVNSLKDGRRVVILMDLDVLKTADKVGGNIGNPVPYNEG
QGQQRSSAPAASPVPSKPQPQQQNDNVSVAGPAAPKYHAPSNQFGKASVPTSVKTPGGSQ
AKVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSVELVDESGEIRATAFNDQ
ADKFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFE
FVPISDLENTPKDSVVDVIGICKSYEDVTKIIVKANNREVSKRNVHLMDMSGKLVTATLW
GNEAEQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQL
LECASISDVRGGPASGANTNWKTLFEAKSENLGQGDKADYFSCVGTVVHLRKENCMYQAC
PSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADCLEYQWVTCFQESAEFILG
QNAAFLGELKEKNEQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAVDVKPVNYRE
YSKRLIASIRRNAQLG
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcggctgagcgagggcgccatcgcggccataatgcaggggcagtacgtcccc
aagcctgtgctgcaagtcatcaatacacgggctattgctacaggaaacgggccaccacgt
taccgagtgttgatgagtgatggggttaacacactttcctcattcatgttggcgacacag
ctgaactctctggtggaagaggaacacttatcagcccaatgtatttgccaggttaacaga
ttcattgtcaacagcctgaaagatggaaggagagtggttatactgatggatttagatgtt
ctgaaaactgctgataaggttggtgggaatattggcaatccagtgccatacaatgaaggg
caagggcagcaacgttcttcagctccagcagcaagcccagtacccagcaaaccacagcca
cagcaacaaaatgacaatgtgtcagtagcaggtcctgctgctccgaaataccatgctccc
tcaaaccaatttggtaaagcgagcgttcccacctcagtgaagacaccagggggatcgcag
gccaaagtagtgccgatcgccagcttgaacccgtaccaatctaagtggaccatttgtgct
cgtgttacccaaaaaggccagatccgcacatggagcaactcccgtggtgaaggaaagctc
ttttctgtagagctagttgatgaaagcggtgagattagagctactgcattcaatgatcaa
gcagacaagttctttccactcattgaattgaacaaggtatattattttaccaaaggcaat
ttgaagactgctaacaagcaatatacagctgttaagaatgactatgagattacattcact
aatgagacttcagttgtgccctgtgatgatgcccagcatcttccatcggttcagtttgag
tttgtacccatctctgacttggagaacacacccaaagactcagttgttgatgtaattgga
atttgtaagagctatgaagacgtcactaaaattatagtgaaagctaacaatagggaggta
tcgaagaggaatgtgcatctgatggatatgtcagggaaactggtgacagctacgctatgg
ggaaatgaggctgaacagtttgatggttctagacaacctgtgatagccatcaaaggagcc
cgagtctctgattttggtggtagaagcctgtctgtcctgtcctcaagtacagttgtcatc
aaccctgatagcccagaggcttttaagctccgaggatggtttgactctgaggggcagctt
ctggaatgtgcctcgatctctgatgtgaggggtgggccagcatctggggcgaataccaat
tggaaaactttgtttgaagccaaatctgagaacttgggacaaggagataaggcagattat
tttagctgtgtgggcactgtcgtacatctgcgcaaagagaactgtatgtaccaggcatgt
ccctctcaggattgcaataagaaagtgatagaccaacaaaatggactgtatcgttgtgaa
aagtgtgatcgcgaattccccaacttcaagtaccgcatgatgcttctggtgaccattgca
gactgtctagagtatcagtgggtgacttgtttccaagagtcagcagaattcattcttggg
caaaacgcagctttcctgggagaactgaaggaaaagaacgagcaggcatttgaagaagtg
ttccaaaatgcaaacttcaacacgtatgagttcaggatccgagtaaaactggagacttac
aacgacgagtctcgtattaaggctacagcagtggacgtcaaacctgtcaactacagagaa
tacagcaagaggttgatcgcaagcatcaggagaaatgctcagctggggtga
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