Ciconia boyciana (Oriental stork): 140661125
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Entry
140661125 CDS
T10948
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
cboy Ciconia boyciana (Oriental stork)
Brite
Enzymes [BR:
cboy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
140661125 (SETX)
5.6.2.5 RNA 5'-3' helicase
140661125 (SETX)
Transcription machinery [BR:
cboy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
140661125 (SETX)
BRITE hierarchy
Other DBs
NCBI-GeneID:
140661125
NCBI-ProteinID:
XP_072738867
LinkDB
All DBs
Position
18
AA seq
2825 aa
AA seq
DB search
MSTCRWCTPSGSDTTEFLKSYASKQLSLEDLEGSNDDLCYCLECVVEYHKAREKLPKLHE
VLWELETSRLVAHIEKSMQEVAGEDDELFIVDENGETQLSGYVGPDFENNLRVPLLEILK
YPYLLLHEKVSELCVEVLCRMEQSHSSFQVFEKYPGIYVFLVHPNEEIRRWAILTARNLG
KVDRDDYYDLQEVLTCLFRVIELGLFDTPDIYSSSMIEKGKLILLPSHLYDTGNYKNYWL
GICMLLTVLEEQAMDSLLLGPHKQNDFMQSILHTMEKEAADDSTDPFWPALHCFMVILDQ
LGSKVWGQLIDPVQAFQTIINSVSYNNEIKNIRSSFKRTKSEPESDYDDDMVTCSQIVYN
YNTEKPQKDTGWKTAICPDYCPNMYEDMQTLANVLQSDIGREMRVHHSTFLWFLPFVQSL
MDLKDLGVAYIVEVIHYLCSEIKDTLHERIQQCDKISEFFLLILVSIIELHRNKRCLHLL
WISSQEWVEAVVRCAKLPAIAFTRCTEKASGHCVRGSSAISLQASNSVQHACVQLIRSLL
KEGCQIGQHALCKQYLDKLNLLLRGNLSLGWHLNIQETQELQTCLRHVIRSIKDRALNTP
IPVGNNANSTTLPTISIKQEKSAHGDGCKMSVHGRDDRCSPLAVTSKEGGDEDCQENPFS
RRKSAWEEECSDASKSSRSWTSTEGLMMNKKELNDLTTQEYVCPQNSSATKVCGKAQENR
NNGFVAGKCDTGNQCFNPNAQHSDFRRGGELENKCEAGPVTPMRPAAQTRIGSPEHVYSS
DVKESSMSPSSSSKFKVDVHRLANLKNKVQKTEWLSKVLQPAKPRDLKNCSSATSASKAE
VEQLKFCTGYLCTSKDCHKHQGVNTVCENEISVDTRSSRTCESTREKSVNSAFQSKLVPT
KQVSKETPLVCSSSSKNEPGMQENEGDGILLSGISDALLKEASTEEKSSSLLKSVFKKDT
DMQTSDREQPNLNDVVKYDCKGQISKTFCMDKTSANGRVPSSSENKRDMSNPASQIRPLS
VKCETSDRLLEFSEYFKRENNSVRKKEEDFVKMVSEDNALTDSQVDRELSKLSLAAYAKS
VNFSFDSSQESSVHHNVCDIKRKVKGAVRSSSDGQSTSSPCDADCLDNKVIIISDSSDED
DDVADKEETKKINENVSPEMQPSTSSCVSDSDIKTESKKPSSPLSLEDCESQYFEFETEV
DVFSVWQDTQAYSTEATPEYKQDHVSTSVDGNSGGLLIDHTNDWGYDVDYVSDDTVEEEA
TLMEKQVGNISHQKEADNTEEVTSSTLQESISKGNAKDQLENFADKGTVAKDFTLDSKLT
EPRASTSNISLASKLALKKNNTSPRKNIAKSKVARTIQRSPKKLPVLKIAQNKKLLQSTS
KNSQPGRSMPAVVPPRKVRQYPAPASTVEKLGLKKAPRKACDLSQRSLERVAQLRSYGKA
AGRVAVAPKQKINVIAPQNLSIKHNKKLLACQDLQFLRQTRPKKSVRMKNRAGNSESRVK
VGKVDAKSMKQKPKSFDLASVERPVENQREKKGEETVCPSASERKFESSSVEEETCVSKM
PSSSDSNRKSEDNSMLVPPVPMDSSLSSAALVGDDKDEPSRKGCVVQPESEKTTSKESGS
KPNEHSEDDDNLFLTQLDPVDMELCSEEGSVQDTTIASKNPEEMDTAESLQQNESSSIVK
CKYKDCMEKVEKLGEYCSKHSAASSEADHLFAKPSLLPPFKTRKPSTTKIFSSPSSSRNA
AFSKDLEDVKKLPPASKSKVNAAKPVAVRLPNVAVPVGNQTCKSPSFSNVPQPHISNNVL
QSQNRQNNNASNISRRPGREASYSSFLGAQQHDHSIFVNEVLKWTYEMFANSSQFGPPRN
LLQSVVASVPVRFQGYNDYFNTFFPLMMLNAFETLAQEWIENQRVREKSYYFYLQNFYAD
LNTADFIAHFRESDLARQLHPKEDDLIFLVVQKKKDTFREESEMENHIVSHVGLVTRFSR
ASGCLTRQKEQHTVCHLSVQTRGNLSFFINKQVKCVVVGSLVTTHRMFKGLLLLSRSPLA
KPIINPSYNDFCPRDLPVASESAASDMNEYNEGQKRAIETAYAMVKQHPGLPKICLIHGP
PGTGKSKTIVGLLSRVLRENTRNEKATQKTNSKIKPNRFLVCAPSNAAVDELMKKIIVAF
KEKCQNRQEPLGNCGDIKLVRLGAEKAINSEVRGFSLDKQVEHRMKRKPADCDLDIQKKK
EALDQQLDMLSRQRAMHRCEKREVSQMLDDEIGRLSKERQQLASQLKEVRGHSQKVQADI
ILESDIICCTLSTSGGGLLDSVFWRQGLDPFSCVIVDEAGQACEVETLIPLIHRCNKLVL
VGDPRQLPPTVKSVKAQEYGYDQSLMARLHRHLEEQVQKNILRSLPVVQLTVQYRMHPDI
CLFPSNYVYGRTLKTDKATEENRCSSEWPFQPYLIFDVGDGREERDNDSFSNPQEVKLVM
ELIRTIKEKRKDLGLRRIGIITPYSAQKKKIQEQLDRAFKNNSPGEVDTVDAFQGREKDC
IIVTCVRANSTKGSIGFLASLQRLNVTITRARFSLFILGRLKTLMENKDWNELIQDAQKR
GAIIKTSEKSYRKDAVKILKLKPTIQPPAIPGIKASPLLQAASSSSRRGELANPREASSP
WELAAGAGRAVPQGSRGPQQPQGAQPADFRRGSASAPVEAAALPDREKPRDPRLASMASR
TETKGKQQASKDSNRSAQSNPGSTSQPGLHVSSAARDQISRTETSKKPQETMRQCDVPST
SPYAAWHKGYWRSSVSKSSSKARSEGGQSSSSKRNEDYRVLMRRTSEESPENTESSNAKR
RKTSH
NT seq
8478 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgtcgatggtgtacacctagtggttctgacaccactgagttcctgaagagc
tatgcttctaaacagttgtccctggaagatcttgaaggatccaacgatgatctctgttac
tgcttggagtgtgtggttgaataccacaaagcaagggagaaattgccaaagttgcatgag
gtcttgtgggagttggaaacctcccgtcttgttgcccacattgagaagtccatgcaagaa
gttgctggagaagatgatgagttgtttattgtggatgagaatggagagacacagctgtct
ggttatgtgggcccggattttgagaataacctgcgagtgccccttctagaaatactgaaa
tatccgtatctgctgctgcacgagaaagtcagtgagctgtgtgtggaagtgctctgtaga
atggaacaaagtcacagctcctttcaggtctttgagaaatatccaggaatttatgtcttt
ttggtacacccgaatgaagagattcgtcgatgggccatcctcacagcaaggaatttaggg
aaggttgatagggatgattactatgacttacaggaagtcctgacttgcttgttcagagtt
attgagttggggctttttgacactccagatatttacagctcttcaatgattgaaaagggt
aaactcatccttctgccatctcatttatatgatactggcaactacaagaactattggcta
gggatttgtatgttgctaacggtactggaagaacaagctatggactccttgttactgggc
ccacacaaacaaaatgatttcatgcagtctatactgcacaccatggagaaggaagcagct
gatgattctactgaccccttctggccagcgctgcattgtttcatggttattttggatcag
ctcggatctaaagtatggggtcagcttattgatcctgtccaagcctttcaaaccattatc
aacagtgtgagctacaacaatgaaataaaaaatatacgcagtagctttaagaggacaaaa
tctgagccggagtcagactacgatgatgacatggttacttgcagtcagattgtatataat
tataacacagaaaagcctcaaaaggatactggatggaagacggccatttgtccggactac
tgccccaacatgtatgaagatatgcagacactggctaatgtgcttcagtcggatattggc
agagagatgcgtgtccatcacagcacgtttctgtggttcctcccttttgttcagtcactt
atggatctcaaggatttgggcgtagcatatatagtagaagtcattcactacctctgctcg
gaaatcaaagatactctccatgaaagaatccagcagtgtgacaaaatctctgaatttttt
ctcctgatcttggtgtccattattgaactacacagaaataaaagatgcctgcatttgcta
tggattagctcccaagaatgggtggaggcagtggtgagatgtgccaagcttccagctata
gcgtttacccggtgcactgaaaaagcatctggacactgtgtgagaggttcatcagcaata
tctttacaagcttctaactctgtgcagcacgcctgcgtgcagctgatacgcagccttctt
aaagaaggctgtcaaattgggcagcatgctctttgcaagcaatacctagacaaactcaat
cttcttctgcgaggaaatctatctttaggttggcatctgaacatccaggaaactcaggaa
ttacaaacgtgtttaaggcatgttataagaagtataaaggacagagcattgaataccccc
atacctgtaggaaacaatgcaaactctacaactttgcctaccatttctataaagcaagag
aagagcgcccatggtgatggatgcaagatgagtgtacatggcagagatgaccgttgttca
ccacttgctgtcacatcaaaggaaggcggagatgaagattgtcaagagaaccctttctct
agaagaaagagtgcctgggaagaggaatgtagcgatgcatctaaaagttcaagatcttgg
acgtccacagaaggcctcatgatgaataaaaaggaacttaatgacttgacaactcaggag
tatgtctgcccacagaactcttcagcaacaaaagtatgtgggaaagctcaggaaaacagg
aacaatggttttgtggcagggaaatgcgatacgggtaatcagtgctttaatccaaatgcc
cagcattcagatttcagaagaggcggagagttggaaaacaaatgtgaagcaggacccgta
acaccaatgcgtccggctgctcaaactcgtattggttctccagaacatgtttacagctca
gatgtaaaggaaagcagtatgtctcccagttcctcttcaaagtttaaagtagatgtgcat
agactcgcaaatttgaaaaacaaggtacagaaaactgaatggctctcaaaagtattgcag
ccagcgaagccacgcgacttgaaaaactgcagttcagcaacaagtgcttcaaaagcagag
gtagagcaacttaagttttgcactggctatctgtgtacaagcaaagattgtcataaacat
cagggagtgaatactgtgtgtgaaaatgaaatctctgttgatactcgatcttcaaggact
tgtgaaagtacacgggagaaaagtgtcaacagtgcttttcaatccaaactggtccccact
aaacaggtatcaaaagaaacaccactagtttgctctagctcctctaaaaatgaacctggt
atgcaggaaaatgaaggtgacggtattttgctttcagggattagtgatgccttactgaaa
gaagcatccactgaagaaaaatcaagttcattgttgaagtctgtgtttaagaaagacact
gacatgcaaacttcagaccgggaacagcctaatttaaatgacgtggttaaatatgactgt
aaaggtcaaatttcaaagacattttgtatggataaaacttcagcaaatggtcgtgttcca
tccagctctgaaaacaagagggatatgtccaaccctgcttctcagatcaggccactgtca
gtgaagtgtgaaacaagtgacaggttgctcgaattttcagagtatttcaagagagaaaac
aattcagtgaggaagaaagaggaggattttgtgaagatggtttctgaagataatgcttta
acagactcccaggttgatagagaactcagtaaattatctttagctgcatatgccaaaagt
gtcaatttttcctttgattcaagccaagaaagctcagtacatcataatgtatgcgatatt
aaaaggaaagtgaaaggtgctgtaagatcttccagtgatggccaaagtaccagctctccc
tgtgacgcagattgccttgacaataaagtcattataatttcagactcttctgatgaagat
gatgatgtggctgacaaggaggaaacaaaaaaaattaatgaaaatgtgtcccctgaaatg
cagccttcaacttccagctgtgtttctgatagtgatatcaaaacagaatcaaagaagcca
agctctcccttgtcactggaagactgtgagtctcagtactttgaatttgaaacagaagtt
gatgtcttttcagtttggcaagatactcaagcatacagtacggaagcaactccagagtat
aaacaagatcatgtttcaacatcggttgatggtaattcgggtggcttactgattgatcac
acaaatgactggggttatgatgtggattatgtaagtgatgatactgtggaagaagaagca
accttgatggaaaagcaggtaggaaatatttctcatcagaaagaagctgataatacagaa
gaagtaactagttcaacactgcaagaatctattagtaagggaaatgcaaaagatcaactg
gagaattttgcagacaaaggtactgttgctaaagacttcaccctggactcaaaattgact
gaacccagagcatctacatctaacatctcattagcttcaaaattggcccttaagaaaaat
aacacgagcccacggaagaatatagcaaaatctaaggtagcaagaactattcaaagaagt
cctaaaaaacttcctgttcttaaaatagcacaaaataaaaagctacttcaaagtacatca
aaaaattctcaacctggcaggtcgatgcctgctgtggttcctccaaggaaagttcggcag
tatcctgcacccgcatcaactgtagaaaaactaggtctgaagaaggcgccccgcaaagcg
tgtgacttatcccagcgctctttagagcgtgtagcacaattgcgcagctatggtaaagct
gctgggagagttgcagttgcaccgaaacagaagattaatgtaattgctcctcagaatttg
tctataaaacataataaaaaattgctagcctgccaagaccttcagtttttaaggcagaca
aggcccaaaaaaagtgtcaggatgaaaaatcgtgcaggaaattctgagagtagagtcaaa
gttggcaaagtggatgcaaaatctatgaaacaaaagcctaaaagttttgacctggcatct
gttgaaagacctgttgaaaaccaaagagagaaaaaaggggaggagactgtttgtccctct
gccagcgagagaaaatttgaaagctcctctgtggaggaggagacgtgcgtctctaaaatg
cctagttcttcagactcaaacagaaaatcagaggataacagtatgctggttcctcctgta
cctatggattcaagtctctcttctgctgcacttgttggagatgataaagatgaaccttca
agaaaaggttgcgttgtccagcctgagagtgagaagacaacttcaaaagaaagtgggtct
aaaccaaatgaacacagtgaagatgatgataatctatttttaactcagttagatcctgtg
gatatggaattatgttccgaggagggcagtgttcaagatactactatagctagtaaaaac
ccagaggaaatggatactgctgagagccttcagcagaatgaatcctcgagtattgtgaaa
tgtaagtacaaagactgtatggaaaaagtggaaaaactaggagagtactgtagtaagcat
tcagccgccagctcagaagcagatcacttgtttgccaaaccttctctcctgccacctttt
aaaacaagaaagccttccactaccaaaattttcagctcaccaagttcttcacggaatgca
gccttcagcaaagatcttgaagatgttaaaaagctaccgccagcttcaaaaagcaaagtg
aatgcagcgaaaccggtggcagtcaggctaccaaatgtggctgtgccagtaggaaatcaa
acatgcaagtctccaagtttcagtaatgtacctcaaccccatatttctaataacgttctc
cagtcgcaaaacagacagaacaacaatgcgtcaaatatttccagaaggcctggccgagaa
gcatcttattcttcctttcttggtgctcagcaacatgatcatagtatttttgttaatgaa
gtcctgaagtggacttatgaaatgttcgcaaactccagccagtttggacctccacgtaat
ctcttgcagtctgtggtagcctctgttcctgtccgatttcagggatacaatgactatttt
aatacatttttccccttgatgatgctaaatgcctttgaaacactggcacaagagtggata
gaaaaccagagagtaagagagaagagttactacttctacttacaaaacttctatgctgac
ttgaatacagcagattttatagctcattttcgcgaaagtgatttggcaaggcagcttcat
ccaaaggaggatgacttaatctttttggtggtccaaaagaaaaaagacacctttagggaa
gaaagcgagatggagaaccatatagtgagtcacgttggtcttgtgacacgattttctcgt
gcatctggctgtttaactagacaaaaggagcagcatacagtctgtcatctttctgtgcaa
actcgaggcaatttgtcattcttcataaataagcaagtgaagtgtgtggtggttggctcc
ctggtgaccacacaccgaatgttcaaaggtctactactattgagcaggagtcccctggct
aaacccatcataaatccaagttacaatgacttctgtcccagagatttgcctgtagcttca
gaaagtgctgcatcggatatgaacgaatacaatgaaggtcaaaagagagccattgagaca
gcttatgccatggtaaagcaacatccagggcttcccaagatctgcctcatccacggacca
cctggaacagggaaatcaaaaactattgttggacttctgtctcgtgttttgagagaaaac
actaggaatgagaaagcaactcaaaaaacaaattccaagatcaagccaaaccgttttctg
gtttgtgcaccatcaaatgctgctgttgatgaactcatgaaaaagatcatcgttgcattt
aaggaaaaatgccaaaacagacaggagcctttgggaaattgtggtgatatcaaattggtg
cgacttggtgctgaaaaggcaatcaacagtgaagtccggggatttagcttggataagcaa
gttgaacatagaatgaaacgaaagccagctgactgtgacttggatattcagaagaaaaaa
gaagctctggatcaacagctggacatgctgtctcgtcagcgtgccatgcacagatgtgag
aagagggaggtaagtcaaatgttagatgatgaaattggcagactttccaaggagagacag
cagcttgcttctcaactaaaggaggttcgggggcactctcagaaagtacaggcagatatc
atcttggagtccgacatcatctgctgcacgctgagcacaagcggaggaggtctgctggat
tctgttttttggcggcaaggacttgatcctttcagctgtgtcattgtggatgaggcaggg
caggcctgtgaggttgaaacactgattccactgatccatcgctgtaataaacttgtcctt
gttggagatcccagacagctccctcctactgtaaaatcagtaaaagctcaggaatatggc
tacgatcagtccttgatggcacgcctgcacagacacctggaggagcaagtgcagaagaac
attttacgaagcttaccagttgtgcagctgactgtgcagtacaggatgcaccctgacatc
tgcctcttcccatccaattacgtttatggcaggactctaaagactgacaaagcaacagaa
gagaacagatgttcttcagagtggccattccagccctaccttatttttgatgtaggagat
ggtcgtgaggagcgagacaatgactcttttagtaatcctcaggaggtgaagctggtgatg
gaattaattagaacaattaaagaaaaaaggaaggatctgggtcttcgtcgcattggaata
attaccccgtacagtgcacagaagaagaaaattcaagaacaactggacagagcgtttaag
aataacagcccaggagaagtggacacagtggatgcattccagggacgtgagaaagactgc
atcatagtgacgtgtgtccgggcaaacagcactaaagggtcaattgggtttctggcaagt
cttcagcgtctgaatgttacaattacccgagccagattcagcctcttcatccttggaaga
ctgaaaacactcatggaaaataaagactggaatgagttgattcaggatgctcagaaaaga
ggtgccattatcaagacatcagaaaaaagctacaggaaagatgctgttaagattttgaag
ctcaagccaacaatacagcctccagccataccagggataaaggcatctcctctgttgcag
gctgcttcttccagtagcaggaggggtgagcttgcaaatccaagggaggccagcagccca
tgggaactcgctgctggtgctggccgtgcagtgccacaaggaagcagagggccccagcag
ccgcagggggctcagcctgcagacttcaggagaggcagtgcctccgcacccgtggaggca
gcagcgcttcctgatcgagagaaaccgcgcgatccaaggctggcaagtatggctagtaga
actgaaacaaaagggaagcagcaggcctcaaaagatagcaatcggtcagcccagagcaat
ccaggatcaacgtcacagccaggcctccatgtgtcttcagctgccagggatcagatttcc
agaacagaaacttctaagaagccccaggaaacaatgagacaatgcgacgtgccttccacg
tcgccttatgcagcttggcacaagggttactggagatcttctgtgtcgaaaagcagttca
aaagcccgcagtgaaggaggtcaaagtagcagcagtaagcggaacgaagactatcgtgtt
ttaatgaggagaacatcagaggaatcaccagagaacacagaatcaagcaatgccaagcga
agaaagacctctcactga
DBGET
integrated database retrieval system
