Ciconia boyciana (Oriental stork): 140661205
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Entry
140661205 CDS
T10948
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
KO
K08524
retinoid X receptor alpha
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03320
PPAR signaling pathway
cboy04148
Efferocytosis
cboy04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
140661205 (RXRA)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
140661205 (RXRA)
03320 PPAR signaling pathway
140661205 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cboy03000
]
140661205 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cboy03310
]
140661205 (RXRA)
Transcription factors [BR:
cboy03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
140661205 (RXRA)
Nuclear receptors [BR:
cboy03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
140661205 (RXRA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
CRT10
Motif
Other DBs
NCBI-GeneID:
140661205
NCBI-ProteinID:
XP_072739097
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Position
18:complement(4257736..4379283)
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AA seq
467 aa
AA seq
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MDTKHFLPLDFSNQVNSTSLNSPTSRGPMATPSLHPSIGPGIGSSLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPSLGFGTSSPQLNSPMNPVSSSEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacacttcctgccactggacttctccaaccaagtcaattccacgtccctg
aactctcccacgagccgggggcccatggccaccccatccctccacccgtccatcgggccg
ggcatcggctcctctctgggctccccgggccagctccactcgcccatcagcaccctgagc
tcgcccatcaacggcatgggacctccgttctcagtcatcagctcccccatgggcccgcac
tcgatgtccgtcccctccacccccagcctgggattcggcaccagcagcccgcagctcaac
tcacccatgaaccccgtcagcagctcagaagacattaagccacccctcgggctcaatgga
gtcctcaaagtgccagcacatccctcaggaacgatggcctccttcaccaagcacatatgt
gccatctgcggggacagatcttcaggtaaacattacggggtttacagctgcgagggctgc
aaaggcttcttcaagcgcacggtgcggaaagacctcacctacacctgccgcgacaacaag
gactgcttgatcgacaagcgccagcgcaaccgctgccagtactgccgctatcagaagtgt
cttgcgatggggatgaagcgagaagccgtccaggaggagaggcagcggggcaaggaccgc
aacgagaacgaggtggagtcaacaagtagtgctaacgaggacatgcccgtggaaaagatc
ttggaagctgaactcgcagtggagccaaagacagagacgtacattgaagcaaatatgggc
ttgacgccgagctcgcccaatgacccagtgacgaacatatgccaggcagcagacaaacag
ctcttcaccctggtggagtgggccaagaggatcccccacttctccgagctgcccctggac
gaccaggtcatcttgctcagagcagggtggaatgagctcctaatcgcctccttctcccac
cgctccatagccgtgaaagacgggatcctcttagccaccgggctccacgtgcaccggaac
agcgcgcacagtgctggcgtcggggccatcttcgacagagtactgacagaactcgtgtca
aaaatgcgagacatgcagatggacaagacagagctaggctgcctgcgagccattgtcctc
ttcaaccccgactcgaaaggtctctccaacccggctgaagtggaggcgttacgggagaag
gtgtacgcgtcgctagaggcatactgcaaacacaaataccccgaccagcccgggaggttc
gcaaagctcttgctccgtctcccagccctccggtccattggcctgaaatgcctggagcac
cttttctttttcaagctaataggcgacacaccaatcgacaccttcttgatggaaatgctg
gaagcgccccatcaaatgacttag
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