Ciconia boyciana (Oriental stork): 140661289
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Entry
140661289 CDS
T10948
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140661289 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cboy03041
]
140661289 (PRPF4)
Spliceosome [BR:
cboy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
140661289 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_Aladin
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
140661289
NCBI-ProteinID:
XP_072739286
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All DBs
Position
18:11612383..11621341
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AA seq
691 aa
AA seq
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MAAASSPAAAASASSRCFLRLCGAKGPRQGAPGRGQADPPGAAAAGPARTSRSFRMLSNS
SMSSSFSSSRVGFRRSIATRRRAAPLRSLSRRRRGPSAPRPPLPPCPARPAPPGRRASRR
APRPPEAVVRRRGLCAAPCGPARLGSIRLRLRSPPGAAAMASVRAPAARGGARAPAPAEA
TKSKPAEESDAPPPKRAPIFYGSLEEKERERLAKGESGLLGKEGMKAAIEAGNINISSGE
VFDLEDHMSERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRE
RLRNILSVVGTDALKKTRKDDDRSKKSKEEYQQTWYHEGPRSLKTARLWLANYSLPRAAK
RLEEARLLKEIPEATRTSQRQELHKSLRSLNNFCSQIGDDRPLSYCHFSPNSKLLATACW
SGLCKLWSVPDCNLVHTLRGHNTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLE
SDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDI
AFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGVNFSPNGYHVATGSGDNTC
KVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGH
EGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcctcctcgccggccgccgccgcctccgcgtcctcccgctgcttcttgcgg
ctctgcggggcaaaggggccgcgtcagggcgctcccgggcgggggcaggcggacccgccg
ggggcggccgcggccggccccgctcgcacctccaggtccttccggatgctctcgaactcc
tcgatgtcgtccagcttcagctccagccgcgtcggcttccgccgcagcatcgcgacccgc
cgccgcgccgctccgctccgctccctcagccgccgccggcgagggccgagcgcgcccagg
ccgcccctcccgccgtgccccgcgcgccccgccccgcccggccgccgcgcctcccgccgt
gccccgcgtcccccggaagcggttgtgaggcggcggggcctgtgcgcggcgccttgcggc
ccggcccggctcggctcgatccggctccggctccgctcccctcccggcgcggccgccatg
gcctccgtgcgggctccggcggcgcgcggcggcgcccgggcccccgcgcccgcggaggcc
acaaagagcaagcccgcagaagagagcgatgctcctccacccaagagagcccccatcttt
tatggcagtttggaagagaaggaaagggagcgtctggcaaaaggagaatccgggttgctg
ggaaaagaagggatgaaagctgcgatcgaggctggcaacatcaacataagcagtggtgag
gtctttgatctcgaagaccacatgagcgagcggcaggcagaagtgctggctgagtttgag
cgcaggaagagagcccggcagatcaacgtgtccactgacgactctgaagtgaaagcctgt
ttgcgagcgcttggggagcccatcacgctctttggagaaggtcctgcagaaaggagggag
agattaagaaatatcctttcggtggttggaacagacgcattaaaaaagaccaggaaagat
gacgacaggtctaaaaaatccaaagaagagtatcagcaaacctggtaccacgaaggacca
cgcagtttgaaaacagcgaggctgtggcttgctaactattcactccccagggcagcgaag
cggctagaagaagcccggctgctcaaagagattccggaggcaaccaggacatcacagaga
caggagctacacaaatccctgcgatccttgaataacttctgcagtcagattggagacgat
cgcccactctcctactgccacttcagccccaattccaaactcctcgctacggcctgttgg
agcggattgtgcaagctctggtctgtgcctgactgcaaccttgttcacaccttacgagga
cataacaccaacgtaggagcaatagtcttccatcccaaagccactgtctccctagacaag
aaggatgttaacctggcctcgtgtgcggccgatgggtctgtcaaactctggagccttgaa
agtgatgaaccagtggcagatattgaaggacacagcatgagagtggcacgtgtgatgtgg
cacccatctgggaggttcctgggtactacctgctatgatcactcgtggcgcttgtgggac
ttggaagctcaggaagagattctccatcaggaggggcacagcaaaggggtctatgacatc
gcctttcacacggatgggtctctcgctgggactggtggactggatgcttttggccgggtg
tgggacttgcgcacgggacgctgtatcatgtttctagaaggccacctgaaggagatctac
ggggttaacttctccccaaatggataccacgtcgcaactggcagtggtgacaatacttgc
aaagtatgggacctccgccagaggaagtgcatctacaccattcctgcccatcagaacctg
gtgaccggggtgaaatttgaacccaatcacggtaacttcctgctcacaggcgcttacgac
aacactgcaaagatctggactcaccccggctggtcccctttgaaaacgctggctggtcat
gaggggaaggtgatgggactggatatctcccttgacggccagctgatagcgacctgctcc
tatgacagaaccttcaagttgtggacagcggagtag
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