Ciconia boyciana (Oriental stork): 140661980
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Entry
140661980 CDS
T10948
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
cboy Ciconia boyciana (Oriental stork)
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cboy01009
]
140661980 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cboy03021
]
140661980 (SFPQ)
03041 Spliceosome [BR:
cboy03041
]
140661980 (SFPQ)
Protein phosphatases and associated proteins [BR:
cboy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140661980 (SFPQ)
Transcription machinery [BR:
cboy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
140661980 (SFPQ)
Spliceosome [BR:
cboy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
140661980 (SFPQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
140661980
NCBI-ProteinID:
XP_072741012
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Position
21:complement(6774777..6789950)
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AA seq
648 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGPNHDFRSPPPGMGMGQNRGPMGGGPQGPGGPPG
GGPKPEPPKPPASTSAPPSSSSSAAATTAGPAGSQAGPGAPPPSALPTGQPPQQQTPVST
PSSAPSGPGGQPQPKPSPSPTPAGGPKKGQGQSPGGGPKGPGGPQQGPGGPHKGGPGHRG
GPGGEPRGRGQQHQGQQSLSSQQGSAGGGGGEKLSDEGFKANLSLLRRPGEKTYTQRCRL
FVGNLPADITDEDFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRG
RQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPVERAVVIVDDRGRSTGKGIVEFA
SKPAARKAFERCTEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPR
FAQPGSFEFEYSQRWKSLDEMEKQQREQVAKNMKDAKDKLESEMEDAYHEHQANLLRQDL
MRRQEELRRMEELHNQEMQKRKEIQLRQEEERRRREEEMMIRQREMEEQMRRQREENYSR
MGYMDPRERDMRMGGATTMNMGDPYASAAQKFPPLGGGGGIGYEANPGVGQAAMSGSMMG
SDMRPERFGQGGAGPVGGQGPRGMGPGTPTGYGRGREEYEGPNKKPRF
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggatcggttccgtagccgtggcggcggcggaggcggcttccaccggcgcggc
ggcggcggtggccgcggcggccccaaccacgatttccgctctccgccgcccggcatgggt
atgggccagaaccgcggccccatggggggcggcccgcagggcccgggcggcccgccgggc
ggaggcccgaagcccgagcctccgaagccgcccgcgtcgacctctgctccgccttcttcg
tcctcttcagccgctgccaccacggcggggcctgccggcagccaggccggcccgggagcg
cctccgccgtccgcgctgcccacggggcagccgccgcagcagcagaccccggtgtcgacg
ccctcctcggctccctccggcccgggggggcagccgcagcccaagccgagccccagcccc
accccagccggcggccctaagaagggacaaggacagtcgcccggcggcgggcccaaggga
ccgggcggcccccagcaggggcccggcgggccgcacaagggcgggccggggcaccgcggc
gggccgggcggagagccgcgcggccgcgggcagcagcaccagggacagcagagcctctcc
tcgcagcagggctcagccggcggtggcggcggcgagaagctctcggacgagggatttaaa
gcaaacctctctcttctgaggcgaccgggggagaagacctatactcagcgttgccgcttg
tttgttgggaatttgcctgctgatataacagacgaagactttaaaagactgttcgccaaa
tatggggagccaggagaggtttttatcaacaaggggaaaggctttggattcattaaattg
gaatctagagctcttgcagaaattgcgaaggcagaactggatgatacccccatgaggggt
cgacagcttcgtgttcggtttgccacacatgctgctgctctttcagtgcgtaatctttca
ccctatgtgtccaacgagttgctggaggaagctttttcccagtttggtccagtggaaaga
gctgttgtgattgtagatgatcgaggtagatcaacaggaaaaggcattgttgaatttgca
tcaaagccagctgcaagaaaagcatttgaacggtgtactgaaggagtgtttttgttgaca
accactcctaggccagttattgtggagccattggaacaactggatgatgaagatggtctt
ccagaaaagcttgctcagaagaatccgatgtatcaaaaggaaagagagactcctccccgt
tttgctcagcctggcagttttgaatttgaatattcccagaggtggaaatctttagatgaa
atggaaaagcagcagagagagcaagtggcgaaaaacatgaaagatgccaaggacaaactt
gaaagtgagatggaagatgcttatcatgagcatcaggcaaacctcttgcgtcaagacctt
atgaggcgtcaggaagaactgagacgtatggaagaactccataatcaagaaatgcagaaa
cgcaaggaaattcaactgaggcaggaggaggagcgtcgcaggcgggaagaggaaatgatg
atacgtcagcgggagatggaagaacaaatgagaagacagagggaagagaattatagtaga
atgggttacatggatccaagggagagagacatgagaatgggtggtgccaccacaatgaac
atgggagatccttatgcttctgcagcccagaaatttccacctctcggaggtggtggcggc
ataggttatgaagctaatccaggagttggccaagcagccatgagtggttctatgatggga
agtgacatgcgtcctgaacgctttgggcagggaggtgcggggcccgtgggtggccagggt
cctagaggaatggggcctggaacaccaacaggatatggtagagggagagaagaatatgaa
ggcccaaacaaaaagccccgattttag
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