Ciconia boyciana (Oriental stork): 140662006
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Entry
140662006 CDS
T10948
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03013
Nucleocytoplasmic transport
cboy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140662006 (SRRM1)
03015 mRNA surveillance pathway
140662006 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cboy03019
]
140662006 (SRRM1)
03041 Spliceosome [BR:
cboy03041
]
140662006 (SRRM1)
Messenger RNA biogenesis [BR:
cboy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
140662006 (SRRM1)
Spliceosome [BR:
cboy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
140662006 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
140662006
NCBI-ProteinID:
XP_072741083
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Position
21:complement(4796273..4815086)
Genome browser
AA seq
893 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNS
DIPKAPKPEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPR
RRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSS
SSSSSSRSRSPPKKPPKRTVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQ
QSNRARKSRGSVSPSRASAPKHKSTEKRESPSPAAKPRKAELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKES
SPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQR
RYSPSPPPKRRTTSPPPPPKRRASPSPQSKRRVSHSPPPRQRSSPAAKRRSPSLSSKHRK
GSPPSRSNRETRSPPQNKRHSPSPRPRASHTSASPPPPRRGASASPQRRQSPSPSARPIR
RVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPTRSRSPSANWSPA
KKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAAAAAAAVA
VADTTSAQEDQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggttcttccgcggaacaagtgcagaacaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagttgaaatttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaaccca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctgttaagtgcacaagaaaacattgctggtattcca
actgcatttctggaactgaagaaagaagaaataaaacagcgacagatagagcaagagaaa
ctggcttctatgaagaaacaagatgaagacaaggagaagagggataaggaagacaaagac
aacagagaaaaaagagacagatccaggagtcccagaagacgtaagtcaaggtctccttcc
cctcgaaggaggtcgtcgcctgtcaggagagagcggaaacgcagccattctcgctcccct
catcacagaaccaagagccgcagtgctactcctgcaccagaaaagaaagaggcgactcct
gagccagaaccttctgtgaaaccaaaggagactgttgttcaagaggcaacttcaaacagt
gatatcccaaaagctcctaaacctgaacctcctgtaccagagactaaggaaacttcacca
gaacgtaattcaaagaaggagagagagaaggaaaaagagaagactcgtcaaagatcccca
actcggtccaagtcaaggtcaagatctcggtcacgttctccatctcattctcgaccaaga
aggcgtcatagatcacggtcaaggtcttactcccctagaaggcgaccaagcccaagacga
cggccatctccaaggagaaggagccctccaaggcgaatgcctcccccacccagacacaga
agaagcagatcccctgtgaggcggagaagacggtcatcagcatccttatctggcagtagc
tcttcctcctcctcctcacgttcccgatcaccaccaaagaaaccacctaaaagaactgta
tccagtcctcctcgtaaaacacgtaggctctctccttcggcaagccctcctaggcggagg
cacagaccatccccaccagcaagtccacctccaaaaccacgtaggtctccaacgccccag
cagtctaatcgtgcaagaaaaagccgtggctctgtttcgcctagcagagcatcagcaccc
aaacataagagtactgaaaaaagagaatctccttcgccagcagcaaaaccaaggaaagca
gaactgtctgaatcagaggaagataaaggaggtaaaatggctgcagcagactctgttcaa
cagaggcgtcagtacagaaggcaaaatcaacagtcttcatctgattcgggttcttcgtct
tcatctgaagaggaaagacctaaaagatccaatgtgaagaatggggaagttggtagacgc
cgacgccattcacattcacgaagtccatcaccgtctccacgaaaacgacagaaggaatcc
tcccctcgcaggaggaggagaagtccatcgcccccaccagccaggcggcgacgctctcct
tcacctgcccctcctcctaggcggcggcggtcaccttcattacctcgtcgaaggtctcca
tcaccacccccacgcaggcgctcaccttctccgcggagatactctccaccgatacagaga
cgatattctccttcaccaccgcccaagagaagaacgacttctcctcctcccccgcctaaa
cgaagggcatcaccttctccacagtcaaaacgcagagtctcccattcgccaccgccaaga
cagaggagctcgccagctgctaaaaggcgttcaccttccctatcttccaagcacaggaag
ggatctcctcccagtaggtccaatcgggaaacacgttctccaccacaaaacaaaaggcat
tcaccttcaccacggcctagagcttcccatacctctgcaagcccaccaccaccacgaagg
ggagcttccgcttcaccccagagaagacagtctccatctccaagcgctagacccatcagg
agggtgtcaagaacgccagaacctaagaagacaaaggcttccacgccaagtccacgatct
gcgagacgggtgtcttcatcacggtctgcatcaggatcacccgagccagcaccgaaaaaa
catcaaggacctccatctcctactcgttctcgctccccttctgcaaactggtcacctgca
aaaaaggctaaaagcccaactcagagcccatcacctgcaaggaattcagatcaagaaggg
ggtggaaagaagaagaagaaaaagaaggataagaagcataaaaaggataaaaagcacaag
aaacacaaaaaacataagaaggagaaggctgcagcggctgcagcagctgctgctgtggct
gtagcagataccacctcagcacaggaagaccaggaagcagagacagaacccaaaaaggag
acagaaagtgaaccagaagacaaccttgatgatctagaaaaacacctgcgagagaaggca
ctgaggtcaatgaggaaggcgcaagtgtcaccaccatcctag
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