Ciconia boyciana (Oriental stork): 140662378
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Entry
140662378 CDS
T10948
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03040
Spliceosome
Brite
Enzymes [BR:
cboy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140662378 (DHX8)
Spliceosome [BR:
cboy03041
]
Complex C
Other components
Step II factors
140662378 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
PRP38_assoc
nSTAND3
Flavi_DEAD
T2SSE
AAA_16
PhoH
TsaE
Transformer
ABC_tran
Sigma54_activ_2
OB_RRP5_4th
Cas3-like_C_2
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
140662378
NCBI-ProteinID:
XP_072741870
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Position
22:complement(228796..244198)
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AA seq
1192 aa
AA seq
DB search
MADVVALEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVINLAEKNTTFDTFKAVLLK
NGAEFTDSLISNLLRLIQTMRPPPKPSTSKEAVVKPKSEKEKLKELFPALCRPDNPNIRN
MLDEDDVKVAADALKELEALMPSADRQGKQRNSDHRAKKKRRSRSRSRDRKRRHRSRSRS
RSRTRDKNRGKSRYRSRSRSQSPSRDRKDREKYVEKSNERWRDKHIDRPPPEEPSIGDIY
NGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTG
SKTSLSMKDVDQDTGEDLNPNRRRNLVGEANEETSMRNPDRPSHLSLVNAPEVEDDSLER
KRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPF
LRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTH
WVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIF
RLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAK
RVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAH
ERTIHTDVLFGLLKKTVQKRRDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILY
TKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELI
ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK
TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAST
VLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPM
LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV
YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAIC
SGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTI
DPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtggtggctctggaggagctcgcgaagctcgaatacttgtcgctggtgtcc
aaggtctgcaccgagctggacaaccacctgggcatcaacgacaaggacctggctgagttt
gtgataaatcttgcagagaaaaatactacgtttgacacattcaaagcagttcttctgaag
aacggtgccgagttcactgattctcttattagtaatttgctacgtctcatacagacaatg
cggcctccaccaaagccatctacgagcaaagaggcagttgtcaaacccaaatcggagaag
gaaaagttgaaggaattgtttccagccctttgcaggccagacaatcccaacatcaggaat
atgctggatgaagatgatgtgaaagtggcagctgatgcacttaaggagcttgaagctcta
atgcctagtgcagacaggcaaggcaagcaaaggaacagtgaccaccgggcaaagaaaaag
aggaggagccgaagtcgtagcagggacaggaaacgaaggcacagatctcgctctaggtct
cgttctaggactcgggataagaacaggggaaaatccagataccggtcaaggagcagaagt
cagagtcccagtagggaccgtaaggatcgagagaagtatgttgagaagagcaatgagaga
tggcgagacaagcacatagaccgtccaccacctgaggagccttccattggagacatttac
aatggcaaagtcacaagtataatgcaatttggatgctttgtacagctggaagggctaagg
aagcgttgggagggcttggtccacatctcagagcttcgaagagaaggacgggttgccaat
gttgccgatgttgtgagcaaaggacaaagagtaaaagtcaaagttttatcctttactgga
tccaaaaccagcctgagcatgaaggatgttgatcaagacactggggaagacttgaaccca
aaccggaggagaaacctcgttggagaagccaatgaagaaacttctatgagaaacccagac
agacctagtcacctgtccctggtgaatgccccggaggtggaggatgatagccttgaacgg
aaacgcctcacccgaatttcagacccagagaaatgggaaataaaacagatgattgcagct
aatgtgctttccaaggaggagtttcctgactttgatgaggagactgggattcttcctaaa
gttgatgatgaagaagatgaggaccttgagattgagttagttgaagaagagccaccgttc
cttcgcggtcatactaaacagagcatggatatgagtcccatcaaaatagtaaagaatcca
gatggttccttgtcccaggctgcaatgatgcagagtgctttagctaaagaaagacgagaa
cttaaacaagcccagagagaagcagagatggattctatccccatgggactcaacacacac
tgggtggatcctctccctgacgtggatggaagacaaatagctgcaaacatgcgaggtatt
gggatgatgcccaatgatatcccagagtggaagaaacatgcatttggtggcaacaaagct
tcttatggtaagaagacccagctttccatcattgagcagagagagagtctcccaatcttc
agactgaaggagcagctgatacaagctgtgcatgacaaccagattctgattgtcattgga
gagacaggatctggaaaaacaacacagattacccaatacctggctgaggcagggtataca
tcaagaggaaaaatcggatgtactcagcctcgcagagtggctgcaatgtctgttgcgaag
agggtgtcagaggaatttggttgctgcttgggacaagaggttggctacaccattcgattt
gaagactgcactagccctgaaactgttatcaaatacatgacagatggcatgttactgagg
gagtgcttgatagatcctgatctgactcagtatgccattatcatgctggatgaagcccat
gagaggaccatacatacagatgtgctctttggactcctgaagaagacagtgcagaaacgg
cgggatatgaagttgatagtgacgtcagcaacgctggatgctgtgaaattctctcagtat
ttctatgaagcgccaatcttcacaattcctggcagaacatacccagtagaaattctgtac
acgaaagagccagagacagattatttggatgccagtctgattacagtaatgcagatccac
ttaacagagccaccaggtgacattttggtgtttctaactggtcaggaagagattgacact
gcctgtgaaatcctctatgagaggatgaaatctctaggacccgatgttccagagttaatt
atcttaccagtatattcggctttacccagtgaaatgcaaaccaggatctttgacccagcc
ccaccaggaagcagaaaggttgtcatcgccactaacattgctgagacatctttgactatt
gatggcatatattacgtagtcgatcctggctttgtgaagcagaaggtttataactccaag
actggaattgaccagctggttgttacaccgatttcacaggctcaagcaaagcagcgagca
ggaagggctgggagaacaggaccaggaaaatgctataggttatatacagagcgtgcttat
cgagatgaaatgctaacaaccaatgtgcctgaaatccagagaacaaatttggccagtaca
gtactttccctgaaggctatgggcatcaatgatttgctctcctttgactttatggatgct
cccccaatggaaactctcataactgccatggagcagctgtacaccctgggagctctggat
gatgaaggactgctcactcgacttgggcgcaggatggcagaattccccttggagcctatg
ttgtgtaagatgttgatcatgtctgtgcatctgggatgcagcgaggaaatgttgacaata
gtctccatgctgtctgtacagaacgtgttctacaggccaaaggataaacaagcacttgct
gatcaaaagaaagccaagttccatcagacagaaggtgaccacctcactctgctggctgtg
tacaattcctggaagaataacaagttttcaaatccctggtgctatgaaaattttatccag
gcccgatccttacgcagggcacaggacatccgcaagcagatgttgggcattatggacagg
cacaagctggatgtggtatcctgtgggaaggcaacagttcgggtgcagaaggccatttgt
agtggtttcttccgaaatgcagcaaagaaggatccccaggaaggttatcggacactcatt
gatcaacaagtagtctatatccacccatccagtgctctcttcaacaggcagccagaatgg
gtggtgtatcatgaactggtgcttaccaccaaggaatatatgcgtgaagtgacgactatt
gatcctcgctggctggtggaatttgcaccagctttcttcaaggtttctgatccaaccaag
ctgagcaaacagaaaaagcagcagcgactagaacccctgtacaatcgctatgaggagccc
aatgcgtggaggatatcacgtgcattcagacggcgatga
DBGET
integrated database retrieval system
