Chryseobacterium balustinum: EB354_01015
Help
Entry
EB354_01015 CDS
T07847
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cbp
Chryseobacterium balustinum
Pathway
cbp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EB354_01015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbp03019
]
EB354_01015
03400 DNA repair and recombination proteins [BR:
cbp03400
]
EB354_01015
Enzymes [BR:
cbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EB354_01015
Messenger RNA biogenesis [BR:
cbp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EB354_01015
DNA repair and recombination proteins [BR:
cbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EB354_01015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
BrxL_ATPase
Cas3-like_C_2
DUF7022
Cullin_Nedd8
Motif
Other DBs
NCBI-ProteinID:
AZB27958
UniProt:
A0AAX2IKA1
LinkDB
All DBs
Position
complement(223185..225086)
Genome browser
AA seq
633 aa
AA seq
DB search
MISSKDFNELKNKTLKHFWGYDQFRDSQEVIIDSVINRKDTLVLLPTGAGKSLCYQLPAL
LQEGTCLVISPLLALMKDQVNQLKFRGIEAEYLSSELDEFDAEVIYNRCKDGLTKLLYVS
PERLTNKLFIQQIEEIQLSFIAVDEAHCISEWGQDFRPSYQNIKDFRKNNPEITCLALTA
TATPKVLDEIKNKLELKDPQVFQKSFKRDNIKIFTEEISDKYQKVFTILKYAKESGIIYV
RTRKDAELLTEFLHRHKIQNVDYFHAGLSTKEKNERQNFWNNSNQNVLISTNAFGMGIDK
DNVRFVIHFSPSQSIENYYQEIGRAGRDGKRSYAFMLWNKQEISNFDQILRNQIPNKAEF
LKIISYLYSKFQVAEFELPEKVFQLNTSGIQSFTKLSTAKIKNVLNFLHTQEIIFHNSNK
SLSSLELLIKPDEIDQLPQKDAYFIEHLLRSISGITTHKVMFSEQNVSNKIGVSIHLIKE
RLKELQQKNYLEYIDGALASVKFLKPRDERAINAMYWNLFEHIQKNKIQKWEEMKFFIED
NQYCKMKLILSYFGEKNTKNCGQCTVCEKNKQSIFGKNVSLEIIKVLNKKPATIEEISIQ
LQFQSKENILENLIFLLDSGKVKMLNFRTYALT
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgatttcctcgaaagattttaatgaacttaaaaataaaacccttaagcatttttggggt
tatgatcaattcagagattctcaagaagtgattattgattctgttatcaacagaaaagat
acattagttcttcttccaaccggcgccggaaaatcattatgttatcagcttcctgcttta
ttacaggaaggaacttgtcttgtaatttctcccttattggcattgatgaaagaccaggtt
aaccaattaaaattcagaggaattgaagcagaatacctcagttcagaattggatgagttt
gatgctgaagtcatttacaacagatgtaaagacggcttaacaaaattactgtatgtttca
ccggaaagactgaccaataaattattcattcaacaaattgaggaaattcagctatcattt
attgcggtggatgaagcacattgtatttctgagtggggacaagatttcagacccagttat
cagaacattaaagatttcagaaaaaataatccggaaattacttgtcttgcattgacagca
acagcaactccaaaagttttagatgaaattaaaaataaactggaacttaaagatccacag
gtatttcaaaaaagtttcaaaagagataatattaaaattttcaccgaagagatttcagat
aaatatcaaaaggtttttaccattcttaaatatgctaaagagtcgggaattatctatgtg
agaacccgaaaagatgccgaattactcactgaatttcttcacagacataaaattcagaat
gttgattatttccatgcaggattatcaacaaaagaaaaaaacgaaagacaaaatttctgg
aacaacagtaatcaaaatgtattaatttccaccaatgcttttggaatggggatcgataaa
gataatgtacgtttcgtcattcacttctccccttctcagtcgattgaaaattattatcag
gaaatcggtcgtgcaggaagagatggcaaaagaagttatgcattcatgctttggaacaag
caggagatttcaaattttgatcaaattctaagaaatcagattcccaataaagctgaattt
ctaaaaatcatttcttatctgtattccaaatttcaggtagcagaatttgagcttcccgaa
aaggtttttcaattaaatacttccggaatccaaagtttcactaaactttcaacagcgaag
attaaaaatgttctgaattttcttcatacccaggaaattattttccacaacagcaacaaa
agtttgtcgtcactcgaacttctcattaagcctgatgaaatcgatcagcttccacagaaa
gatgcttattttatcgaacatcttttgcgtagcatttctggaattactacacacaaagta
atgttcagcgagcagaacgtaagcaataaaatcggagtaagtattcatctgattaaagaa
cgcctgaaagaattacagcagaaaaattatcttgaatatattgatggagctttggcgagt
gtgaaatttctgaaaccacgggacgaaagagctatcaacgcaatgtattggaatcttttt
gaacatattcaaaaaaataaaatccagaagtgggaagagatgaaatttttcatcgaggac
aatcaatactgtaaaatgaaattgatcctctcctattttggtgaaaaaaatactaaaaac
tgcggacaatgcaccgtttgcgaaaaaaacaaacagtctattttcggtaaaaatgtttct
ttggaaatcattaaggttttaaataaaaagccggcaaccattgaagaaatttctatacag
ttgcagtttcagagcaaagaaaatattttagaaaatcttattttcttattagattccgga
aaagtaaaaatgctgaattttagaacgtacgcgttgacataa
DBGET
integrated database retrieval system
