Chryseobacterium balustinum: EB354_04280
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Entry
EB354_04280 CDS
T07847
Name
(GenBank) HD domain-containing protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cbp
Chryseobacterium balustinum
Pathway
cbp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EB354_04280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbp03019
]
EB354_04280
Enzymes [BR:
cbp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
EB354_04280
Messenger RNA biogenesis [BR:
cbp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EB354_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
MIOX
Motif
Other DBs
NCBI-ProteinID:
AZB28542
UniProt:
A0A3G6TH34
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All DBs
Position
902745..904166
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AA seq
473 aa
AA seq
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MEINLNQNKNLKLLKIISEVAAANNQSVYIVGGFVRDLLMKRKASTDIDFVTEQSGIELA
QNVGKEIDPKMKVSVFKTYGTAMIRYKDLELEFVGARKESYTEDSRKPEVEGGTIEDDQK
RRDFTINAMAISLNKDNFGELIDPFDGIGDLGKEILRTPLEPAQTYSDDPLRMMRAVRFA
STLNFAIEENSLNAIKQEAERIKIVSMERIMVEFNKIMLSKKPSIGLKLMEETGLMKLII
PELIDLKGVEEVEGQTHKDNFYHTLEVVDNISENTDNLWLRWAALLHDIGKAPTKKFVEG
TGWTFHGHEFLGSKMVKTLFQKLKLPLNADMKYVQKMVKLSSRPIALITDDTSDAALRRL
LFDAGEDLEDLFTLCKADITTKNSRKQERFKKNFQYVAVKIKEVEEKDQVRNFQPPITGE
EIMTMFDLKPGREIGILKEKVKEAILEGEIGNNHEEAKRFVIAEAEKLGLTLV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggagatcaacctcaatcaaaataaaaatttaaaacttctcaaaattatttctgaagtg
gcggcggcaaacaatcagtcggtgtacatcgttggtggttttgtgcgtgatcttttaatg
aaaagaaaagcgtctaccgatattgattttgtgaccgaacaaagcggaattgagcttgcc
caaaatgtaggaaaagaaattgatcctaaaatgaaagtttcagtttttaaaacctacgga
acggcgatgatcagatacaaagaccttgaattggagtttgtaggagcaagaaaggaaagc
tatactgaagacagccgtaaacccgaagtggaaggcggaacgattgaagatgatcagaaa
agaagagattttaccatcaacgcaatggcgatttctttaaataaagataattttggagaa
ttaatagatccttttgatggaattggtgatctaggaaaagaaattctaagaacaccttta
gaacccgctcaaacgtattctgatgatcctttgagaatgatgagagcggtacgctttgcc
tcgactttaaattttgcgattgaagaaaattctttaaatgcaataaagcaggaggcagaa
agaatcaagattgtttctatggaaagaatcatggttgagtttaataaaatcatgttgtca
aagaaaccatcaattggtttaaaattaatggaagaaacaggcttaatgaagcttattatt
cccgaattgatcgacctgaaaggcgtagaagaagtagaagggcagactcataaagataat
ttttaccatactttggaagtggttgataatatttctgaaaacacagacaatctatggctt
cgctgggctgctttgcttcacgatatcggaaaagctcccacaaaaaaattcgttgaagga
acaggctggacttttcatgggcatgagtttttaggctcgaaaatggtgaaaacacttttc
caaaaattaaaattaccattgaacgctgatatgaagtatgttcagaaaatggtaaaactt
tcatctcgtcccattgccctgattactgatgatacttcagatgcggcattgagaagactg
ctgtttgatgcaggagaagatttggaagatttatttacactttgtaaagcagatatcacg
accaaaaattctagaaagcaggagagatttaaaaaaaatttccaatatgttgcggtaaaa
ataaaagaagtggaagaaaaagatcaggtaagaaattttcaaccacctattacaggagaa
gaaattatgacgatgtttgatctgaagccaggccgtgaaatcggaattttaaaggaaaaa
gtaaaagaagcaattttggaaggcgaaattggaaataatcatgaagaagcaaaaagattt
gtaattgcagaagcagagaaactaggattaacacttgtttaa
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