Chryseobacterium balustinum: EB354_09580
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Entry
EB354_09580 CDS
T07847
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cbp
Chryseobacterium balustinum
Pathway
cbp03030
DNA replication
cbp03430
Mismatch repair
cbp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EB354_09580 (holA)
03430 Mismatch repair
EB354_09580 (holA)
03440 Homologous recombination
EB354_09580 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbp03032
]
EB354_09580 (holA)
03400 DNA repair and recombination proteins [BR:
cbp03400
]
EB354_09580 (holA)
Enzymes [BR:
cbp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EB354_09580 (holA)
DNA replication proteins [BR:
cbp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EB354_09580 (holA)
DNA repair and recombination proteins [BR:
cbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EB354_09580 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Calici_coat
DUF3201
Motif
Other DBs
NCBI-ProteinID:
AZB29482
LinkDB
All DBs
Position
2044837..2045874
Genome browser
AA seq
345 aa
AA seq
DB search
MKELDLILKNIKNKEVLPIYFFHGEEPYFIDVAVKALEHDFLEEDEKAFNQTVTYGKDTT
YQEILSLARQFPMMGDKQVIIVKEAQDLKFNDEESKALDAYAENPVPSTVLVFAHKHKKL
DSRKKVTKTLTKLNALFPSESLKDHTLPKWIADECLRLKIKTAPNISNLLAEYLGNDLSR
ISNELGKLKIILKEGQLLDGTIVENHIGISKEFNVFELQKALGAKNANAAFRIAYFMGKN
PKNNPFVMLLSSLYNYFSNVIIYNTMIGQPQQVIASQMGINPYFIKDYAEAARLYPLKHS
TRVISILREFDMKGKGLGAVNMDDAELIKELVYKIINVDKIKMKV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattagatttaatcctcaaaaatattaaaaataaagaagttttaccgatttat
tttttccacggagaagaaccttactttattgatgttgcggtaaaagcccttgaacacgac
ttcctggaggaagacgaaaaagcttttaaccaaaccgtcacgtacgggaaagataccacg
taccaggaaattctttctttggcgcgacagtttccgatgatgggcgacaaacaggtgatt
atcgtaaaagaagcgcaggatttgaaatttaatgatgaagaaagcaaagctttagatgcg
tatgccgaaaatccggtgccttcaacggttttggtttttgctcataaacataagaagctg
gacagccgaaaaaaggttaccaaaactttaacaaagctaaatgctctttttccgagcgaa
tctttaaaagatcatacgcttcccaaatggatcgctgatgagtgtctcagattaaaaata
aaaacagccccgaatatttctaaccttttagcagaatatcttggaaacgacctttccaga
atctcaaatgagttaggaaaacttaaaattattttaaaagaaggacaacttttagacggt
actatcgttgaaaaccatatcggaataagcaaagagttcaatgtttttgagcttcagaaa
gctttaggagcgaaaaacgctaatgctgcattcagaattgcctattttatggggaaaaac
cctaagaataatccttttgtaatgcttctttccagtttgtacaattacttttcgaatgta
attatttacaatacaatgattgggcaaccccagcaagtaatcgcttcacaaatgggtatt
aatccttactttattaaagattatgcagaagcagcgagattatatccactaaaacattct
acccgtgtcatttctattttaagagaatttgatatgaaaggaaaaggtttgggagccgtg
aatatggatgatgcagaactgattaaagaattggtttacaaaatcattaatgtcgataag
attaaaatgaaggtgtaa
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