Chryseobacterium balustinum: EB354_10015
Help
Entry
EB354_10015 CDS
T07847
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cbp
Chryseobacterium balustinum
Pathway
cbp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EB354_10015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbp03019
]
EB354_10015
Enzymes [BR:
cbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EB354_10015
Messenger RNA biogenesis [BR:
cbp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EB354_10015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
RIF2_ASCE
Mal_decarbox_Al
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AZB29561
UniProt:
A0AAX2IQT9
LinkDB
All DBs
Position
complement(2137029..2138381)
Genome browser
AA seq
450 aa
AA seq
DB search
MEKLTFADFELPVKVLDVLADLNLFEPTPIQEKSIGPILSGRDVMGIAQTGTGKTLAYLL
PVLKTWKYNKNGNPTVVVLVPTRELVVQVTEIIEKLTENLTARVIGIYGGKNINTQKLLF
NDGCDILVGTPGRIMDLSIDNAISLKEVQKLIIDEFDEMLNLGFRPQLTHIFEMMREKRQ
NILFSATMTEAVDDMLDEYFAGPIEISLAKSGTPLEKIEQTAYKVENFNTKINLLEHLLK
SNEEMSKVLIFANNKKHADLLFTQINELFPEQFDVIHSNKSQNYRLKAMKRFENEEIRGL
ITTDVMARGLDISDITHVVNFETPEVPEQYIHRIGRTGRADKDGKAVTFVTKKEDDWALD
IELLMDKELAYIDFPEEVKINPKKIVSEEDQIIMKNPAHAKLFDGGGAFHEKKDKNKKEN
WGGPSKRKTPKKFGANRSQQKAISKSKRKK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactcacttttgcagactttgaacttccggttaaagttcttgatgttttagca
gatttaaatttatttgagcccactccaattcaggaaaaaagtatcggtccgattctttcg
ggaagagatgtgatgggaattgcacaaacgggaacaggaaaaacgttagcttatttatta
ccggttttaaaaacttggaaatataataaaaacggaaatcctaccgtggttgttttggtt
cctacaagagaattggttgttcaggtaacagaaatcatagaaaaactgacagaaaatctt
actgcaagagtaataggaatttatggtgggaaaaatatcaatacgcagaaactattattc
aacgatggttgcgatattttggtaggaactccgggtagaatcatggatttgtcgattgat
aatgcaatttcattaaaagaagttcagaaattgattattgatgaatttgatgaaatgctg
aatttaggtttcagaccacaattaacgcatatcttcgaaatgatgcgtgagaaaagacag
aatattcttttttcagcaacgatgactgaagctgttgatgatatgttggatgaatatttt
gcaggacctatcgaaatttcattggcaaaatctggaactccgcttgaaaaaatcgaacaa
actgcttataaagttgaaaacttcaatacgaagatcaatttacttgagcatttgctgaaa
agcaatgaagagatgtctaaagtattgatttttgcgaacaataaaaagcatgcagattta
ctttttacccaaattaatgagctttttccagagcagtttgatgtaattcactctaacaaa
tctcagaactacagactgaaggcaatgaaacgctttgaaaatgaagaaatcagaggattg
attacgactgacgttatggcgagaggtcttgacatttcagatattacccatgttgtgaat
tttgaaactcctgaagttcctgaacagtatattcatagaataggtagaacaggtagagca
gataaagatggtaaagcggttacttttgtcaccaaaaaagaggatgattgggctttagat
atcgagttgctgatggacaaagaattggcatacatcgacttccctgaagaggtgaaaatc
aatcctaagaaaattgtatctgaagaagatcagattatcatgaaaaatccggcgcatgca
aaactttttgacggtggaggagctttccatgagaaaaaagataagaataaaaaagaaaac
tggggtggaccttccaaaagaaaaacgcccaagaaattcggagcgaataggtcacaacag
aaagcaatttctaagtctaaaagaaagaaataa
DBGET
integrated database retrieval system
