Chryseobacterium balustinum: EB354_12960
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Entry
EB354_12960 CDS
T07847
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cbp
Chryseobacterium balustinum
Pathway
cbp03030
DNA replication
cbp03430
Mismatch repair
cbp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EB354_12960
03430 Mismatch repair
EB354_12960
03440 Homologous recombination
EB354_12960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbp03032
]
EB354_12960
03400 DNA repair and recombination proteins [BR:
cbp03400
]
EB354_12960
Enzymes [BR:
cbp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EB354_12960
DNA replication proteins [BR:
cbp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EB354_12960
DNA repair and recombination proteins [BR:
cbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EB354_12960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
DUF2857
Motif
Other DBs
NCBI-ProteinID:
AZB30086
UniProt:
A0AAX2IPV1
LinkDB
All DBs
Position
complement(2791924..2796594)
Genome browser
AA seq
1556 aa
AA seq
DB search
MYLVFDTETTGLPKNFNAPLSDSDNWPRMVQIAWQLHDDEGNLLENQDYIIKPEGYDIPF
NAARIHGITTKIANEEGRDLEEILNEFAEVLERVRVVSGHNVEFDYNIVGAEFFRKNIQD
NLQEKPKADTMILGTNYCQLGGGRGGRYKSPKLEELYEKLYGHKFDEAHNAAADVNATAQ
VFFEMMRIGIIPAEVLKTSEDQLAYFKTLHPNPIKPFGIVIRRQVADFNNKKKQTDVGSI
DDIDLGRYFNFDNHSVFSTLTATSSINDLIKKASEENFPAVGMVDLGNMMGAFKFVSAVE
SANSDRSKKHKEFLTKKQEAEENATEFNESEPVSEPLIPVVGCEFYISDRYEQKQFTKDD
PDRRTQVVLLAKDFNGYKNLAKLSSIGFLKGFYFGVPRISREVIAEYKEGLIALTSGIMG
DIPDAILNTGEQKGEELFKWWKDTFEDDFYVQIQNHQLPEEEHLNDVLLHFADKYNVKIL
AQNQTYYTNKDDSNIQDIVSCIKDGEKQTTPIGKGFGKRRGLGTKEYYIKNSHEIKEAFL
AYPDAFDAYEEFTAKFKPYTLKRDVLLPKFDIPEEFIHAEDEIDGGKRGEMAYLTHLTYE
GARKRYVETGITDEIKERLDFELEVVANTGYPGYFLIVQDFCNEARKMGVWVGPGRGSAA
GSAVAYCTGITNVDPIKYDLLFERFLNPERVSMPDIDIDFDDEGRDKIIKWVVEKYGKNQ
VAQIITYSVLGGKSAIKDAGRVLDLPIPDTINITKLIPPSPGMNIAKALAKYDKLKPEEQ
MLVDEMKYVLNTPDDARHNVLSSAKKMEGCIRNTGIHACGVIITPEDVSNIIPVTIAAKD
ADILVSQFDNSVAESAGLLKMDFLGLRTLTIIKDALKIIKARHGVDINPDTIPLDDTKTY
QLFKEGRTVGIFQYESPGMQKYMRELKPTVFADLIAMNALYRPGPIKYIPNFINRKHGIE
EIVYDLEETKEHLQETYGITVYQEQVMLLSQKLANFTKGEADTLRKAMGKKQIEVLNKMY
PKFIEGGRKNNLNEERLEKIWNDWKAFAEYAFNKSHSTCYALIAYQTAYLKANYPAEYMA
SVMSNNINNTESITMFMEDCKSIGVDVLGPDVNESQYKFSVNEKGQIRFGLGAIKGIGEG
PSEGITKERTNGRFKNIYDFFERILPSQMNKRVAESLVVAGAFDELDSFHRGQYFDIDMS
GKTNLERLIRYGQSFQESKNEMEYSLFADFADEVQIEQPKLAPCPEWPNMHKLNKEKETI
GFYLSAHPLDEFKFQYQFMQGSLSKKSVLEKEDETKVVTDDTPVLEKDSVDEVADLIEIV
SDDIVAGEEEMVIEEVTKKAEPKGVFGFLNLDEVDAYKEQAFANKQEELFEEKKKDWKTL
QKERENGGGGKEYTVAGLITEYVVKDGFRSGEKVAFVTLEDYSGSYSFRLGDRDYMKLKE
KLEVQRFVILKIKFAQVKDGRVFVNVNEVIELQEAFEKFAKSISLVMDVMDFRSEDLSFF
KNILNENQGNQKFKFYIKNIEDDSHIEVQSMKHSVNLNGDLIKNIQLLNKYEFYLN
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atgtatttagtttttgataccgaaaccactggtttaccgaaaaattttaacgctccatta
tcagattcagacaactggccaagaatggtgcagattgcttggcaattgcatgatgatgag
ggtaatctattagaaaatcaggattatattataaagccggaaggatatgatatacccttt
aatgccgcaagaattcatgggattactaccaaaattgccaatgaagaaggtcgcgatctt
gaagaaattttaaatgaatttgctgaagttttagaaagggtaagggttgtttccggacac
aatgttgagtttgattacaatattgtaggtgctgaattttttagaaaaaacattcaagat
aaccttcaggaaaagccaaaagctgataccatgattctagggacaaattattgtcagcta
ggtggtggaagaggaggtcgatataagtctcctaaactagaggagttatatgaaaaattg
tatggacacaaatttgacgaagcgcacaacgcagcagccgatgtaaatgcgaccgctcag
gttttcttcgaaatgatgcgtatcgggattattcctgctgaggttttaaaaacttctgaa
gatcagctggcatattttaaaacgctacatccaaatcctattaagccttttggaattgtt
atcaggagacaggttgctgattttaataataagaaaaagcagactgatgtaggaagtatt
gatgatattgatttaggaagatattttaattttgataatcacagtgttttttcaacttta
acggcgacttcaagtattaatgacttaataaagaaagcttcagaagaaaattttccagcg
gtcggaatggtcgatttgggaaatatgatgggagcttttaagtttgtttctgctgttgaa
tctgccaattccgatcgttcaaaaaaacacaaagaatttttaacaaaaaaacaggaggca
gaagaaaatgcaacggaattcaacgaaagtgaacctgtttctgaaccattaattcccgtt
gtaggttgtgagttttatatttcagatcgatacgaacagaaacaatttacaaaagacgat
cccgacagaagaacgcaggtggttttgttggcgaaagattttaatggatataaaaattta
gctaagctttcaagtattggtttccttaaaggattttattttggagtccccaggattagc
cgtgaggtgattgcggaatataaagaaggtttaattgctcttacttctggcattatgggt
gatattcctgatgctattttaaataccggtgaacaaaaaggagaagaacttttcaaatgg
tggaaagatacttttgaggatgatttttatgttcagattcaaaatcatcaacttcctgaa
gaagaacatttgaatgatgttttattacattttgcagataaatataatgttaaaatttta
gcacaaaatcaaacgtattataccaataaagatgattctaatattcaggacattgtaagc
tgcattaaagatggtgaaaagcagacaacacccattgggaaaggttttggtaaaagacga
ggcttggggacgaaggaatattatattaaaaattcgcatgagataaaagaagcttttttg
gcttatcccgatgcgtttgatgcatatgaagagtttactgcaaaatttaaaccttatact
ttaaaaagagacgttttacttccgaaatttgatattcctgaagaatttattcatgcggaa
gacgaaattgatggcggaaaacgtggtgaaatggcttatttaacgcatcttacctatgaa
ggagccagaaaaagatatgttgaaaccggaattaccgatgaaatcaaagaacgtttagat
ttcgagcttgaagtagttgccaatacgggttacccaggttactttttaattgtacaggat
ttctgtaacgaagccagaaaaatgggagtttgggttggtcctggccgtggttccgcagct
ggttctgcagtcgcgtattgtaccgggatcaccaatgtggatcctattaaatatgatctg
ctttttgagagattcttaaatcctgaaagggtttcgatgcccgatattgatatcgatttt
gatgatgaaggtcgagataagattattaaatgggttgttgaaaaatatggtaaaaatcag
gttgcgcagattattacatactcagttttgggaggcaaatctgcgattaaagatgcagga
agggttttagatctgccgattccggatactattaatattacaaaattaattcccccaagt
ccggggatgaatattgctaaagcattagcgaaatacgataaattaaaacctgaagaacag
atgcttgtcgatgagatgaagtatgttcttaatacacctgatgatgcacgtcacaacgtt
ttgtcgagtgcaaaaaagatggaaggctgtatacgaaatacagggattcacgcttgtgga
gtaattattacgcctgaagatgtgagtaatattattccggtaacgattgctgcaaaagat
gctgatattttggtctcgcaatttgataactcagtggcggaaagtgccggtcttttgaag
atggactttttgggtcttcgaacattgacgattattaaagatgctttaaaaataattaaa
gcaagacatggagttgatatcaatccagatactattccattggatgatactaaaacgtat
caattatttaaagagggtagaacggtcggaattttccaatatgaaagtccgggaatgcag
aaatacatgagagagcttaaaccaacggtttttgccgacttaattgccatgaatgcgtta
tacagaccaggtccgattaaatatattccaaactttatcaacagaaaacatgggattgaa
gaaattgtttatgatttggaagaaaccaaagaacatcttcaagaaacctatggaatcacg
gtttaccaggagcaggtaatgttgctgtctcaaaaattagccaactttaccaagggggaa
gctgatactttgagaaaagcaatgggtaaaaaacagattgaggttctgaacaaaatgtac
cctaaattcattgaaggcggtagaaaaaacaaccttaacgaagaaagattagaaaaaata
tggaatgactggaaagcctttgcagaatatgctttcaacaaatctcactccacttgttat
gcgttaattgcttatcaaacagcatatttaaaggctaattatcctgcagaatatatggca
agtgtaatgagtaacaacattaacaataccgaatctattacgatgttcatggaagattgt
aaaagtataggggtggatgttttaggacctgatgtgaatgaatcgcagtataaattttct
gtaaatgaaaaagggcagattcgttttgggttgggcgcaataaaaggtattggtgaaggt
ccgagtgaaggaattaccaaagaaagaaccaacggaagatttaaaaatatttatgatttc
tttgaacggattttgccttctcaaatgaataaaagagtggcagaaagtttggttgtcgca
ggggcttttgacgaattagattctttccatagaggtcagtattttgatatagatatgtcg
ggtaaaaccaatttggagcgattaataagatacggacaaagttttcaggagagtaaaaac
gaaatggagtattctctttttgctgatttcgcggatgaggttcagattgagcaacccaaa
ttggcaccttgtccggaatggccaaacatgcataaattaaataaggaaaaagaaaccatt
gggttttatctttctgcgcatcctttggatgagtttaaatttcagtatcaatttatgcag
ggcagtttatctaaaaaatctgttttggaaaaagaggatgaaacaaaagtggtcaccgac
gatactcctgttttagaaaaagattctgtagatgaagtagcagatttaatagaaatagtt
tcggatgatatcgttgcgggtgaggaagaaatggttattgaagaagtcaccaaaaaagct
gagcctaaaggtgttttcggatttttaaatctcgatgaggtagatgcttataaggaacag
gcttttgccaataagcaggaagaattgtttgaagaaaagaagaaagactggaaaacactg
cagaaagaaagagaaaacggcggtggcggaaaagagtatactgtggcagggttgattaca
gaatatgttgtaaaggatggttttagaagtggcgaaaaagtggcttttgttactttagaa
gattattcggggtcgtattctttcagactgggagatcgcgattatatgaaactaaaagaa
aaactcgaagtgcagcgttttgttattttaaaaataaaatttgcgcaggtaaaagacggt
agggtatttgtcaacgtgaatgaagtgattgaattgcaagaagcttttgaaaaatttgcc
aaaagtatctctttggttatggatgtgatggatttccgaagtgaagaccttagtttcttt
aaaaatattctgaatgaaaatcaaggaaatcaaaagtttaaattttacattaaaaatatt
gaagatgattctcatatagaagttcaatcgatgaaacattcggtaaatcttaacggagat
ttaattaagaatattcaacttcttaataaatatgagttttacttgaattga
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