Chryseobacterium balustinum: EB354_13450
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Entry
EB354_13450 CDS
T07847
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cbp
Chryseobacterium balustinum
Pathway
cbp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EB354_13450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbp03019
]
EB354_13450
03009 Ribosome biogenesis [BR:
cbp03009
]
EB354_13450
Enzymes [BR:
cbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EB354_13450
Messenger RNA biogenesis [BR:
cbp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EB354_13450
Ribosome biogenesis [BR:
cbp03009
]
Prokaryotic type
rRNA helicases
EB354_13450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AZB30178
UniProt:
A0A3G6TLU1
LinkDB
All DBs
Position
complement(2903816..2905555)
Genome browser
AA seq
579 aa
AA seq
DB search
MNLFTETNLSPDILKAIGELGYESPTEIQKQTIPFILSDIRDLIALAQTGTGKTAAFSLP
ILDMIDDTSRKIQFLVLCPTRELCLQITKDIKNYSKYMQNIKTTAVYGGSSIMDQIRSLK
DKPQIIVGTPGRVIDLINRKALDFSAIHWLVLDEADEMLSMGFKDDLETIMKETPETKQT
FLFSATMSKEVERISKNYLTNPHRISVGSINEVKKNIKHFYYVAGYRHKKEALKRLIDSN
PNQYSIIFCRTRMETQEVADFLMQNGYAADALHGDLSQAQRDTVMKKFRLKNIDILVATD
VAARGLDVDSLTHVVHFSLPDDPEVFVHRSGRTGRAGKDGISISLIKPEESRKLKQIKSV
TKIDITEAKIPSGEDVIKAQVAGVFENLLEVHEDFFDFNDALIPDLSAFTKEELVHKLLQ
FQLKDLALYYKDRHDLTDQKLSSRDDDRGGRDRDRGRDRDRDRGRDRDRDRGPRGDRDGR
SDRGERRGDRGGKPRQRDENMTRFFFNLGKKDQLKKLDVLEIINKATSSKGNKRAEIGNI
EILEKFSFFEIEKGFKNELLGNIQSMKFKGKDMRAEEAN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatttacggagaccaatttaagtcctgatatccttaaggccattggcgaactg
ggttacgaaagcccgacagaaatccaaaaacagactatccctttcattctttcagatatt
cgcgatctaatcgcacttgcgcagacagggacaggcaaaacagcagcgttttcgcttccg
attttggatatgattgacgatacgagtcgcaaaatccaatttttggtgctttgtccgaca
cgagaattatgtcttcaaattacaaaagacatcaaaaattattcaaagtacatgcagaac
atcaaaactacagcagtttatggtggaagcagtattatggatcaaattcgttctttaaag
gacaagccacagattattgtgggaactccaggaagggtaatcgatttgattaacagaaag
gcattagacttttctgcaattcactggttggttttagacgaagcagatgaaatgctttca
atgggtttcaaagacgatttggaaaccattatgaaagaaactcctgaaacaaaacaaact
ttcttgttctcggcaacgatgagtaaagaagtggagcgtatttctaaaaattatttgaca
aaccctcaccgtatttctgtgggttctattaacgaagttaagaagaacatcaagcatttc
tattatgtagctggttatcgtcataagaaagaggctttgaagagattaatcgattcaaac
cctaatcaatactcaattatcttctgtagaacaagaatggaaactcaggaagttgctgat
ttcttgatgcagaatggttatgcagcagatgctcttcatggtgatctttctcaagcgcag
agagatacagtaatgaagaaattcagattgaaaaatatcgatattttggtagcaacagac
gttgctgcaagaggtttggatgttgattcattaactcacgttgtgcatttctctttacca
gatgatcctgaagtattcgttcacagaagtggtagaacgggtagagcaggtaaagacggt
atttcgatttctttaattaagcctgaagaaagtagaaaattgaagcaaatcaagtcggtt
acaaaaattgacattactgaagctaaaattcctagtggtgaagatgtaattaaagctcag
gttgctggtgtttttgaaaacttacttgaagtacacgaagatttctttgattttaatgat
gctttaattccagatctatcagctttcacaaaagaagagttggtgcacaaattacttcag
ttccaattaaaagatcttgctttgtattacaaagacagacatgatttgactgatcagaaa
ttgagcagcagagatgatgatagaggtggaagagatcgtgatagaggaagagacagagat
cgtgacagaggaagagaccgcgacagagatagaggccctagaggagatcgtgacggaaga
agcgacagaggagaaagaagaggtgatcgtggtggaaaaccaagacaaagagacgaaaat
atgactagatttttcttcaatcttggtaaaaaagatcaattgaaaaaactagatgttttg
gaaatcatcaacaaagcaacttcaagcaaaggtaacaagagagcggagatcggtaatatc
gagatccttgaaaaattctctttctttgaaattgaaaaaggatttaagaatgagctttta
gggaacattcaatcaatgaaattcaaaggaaaagatatgagagctgaagaagctaactaa
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