Chryseobacterium balustinum: EB354_22305
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Entry
EB354_22305 CDS
T07847
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cbp
Chryseobacterium balustinum
Pathway
cbp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EB354_22305 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbp03019
]
EB354_22305 (recQ)
03400 DNA repair and recombination proteins [BR:
cbp03400
]
EB354_22305 (recQ)
Enzymes [BR:
cbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EB354_22305 (recQ)
Messenger RNA biogenesis [BR:
cbp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EB354_22305 (recQ)
DNA repair and recombination proteins [BR:
cbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EB354_22305 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
HTH_40
DEAD
HRDC
RecQ_Zn_bind
ResIII
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AZB31766
UniProt:
A0AAX2IHT9
LinkDB
All DBs
Position
complement(4788018..4790204)
Genome browser
AA seq
728 aa
AA seq
DB search
MKSSLEILQQYFGYDSFRLEQANAVENVIAKKDTFVLMPTGGGKSLCYQVPALVLEGTAI
VISPLIALMKDQVDALRVNGISAAYINSSMSSLEQNETLHQLKNGELKLLYVAPEKLSAD
NGAFLKLLNEVKVSLFAVDEAHCVSHWGHDFRPDYLFLNSLKNQFPQIPIIALTASADEI
TRQDIIKQLNLQQPLVLVSSFDRANIKYFVQPKQSVLHHITQYLSEHPNDSGIIYCLSRK
GTEEMSNQLKENGINSAFYHAGISSAERAKVQEDFIKDKTQVMVATIAFGMGIDKSNVRF
VMHADLPKNIESYYQETGRAGRDGLPSEAILFYSGADVIKLRRFALIEGNEEQSGLMLRK
LQQMADFAEMQKCRRQYLMEYFGENHPGNCNNCDYCLSEFETWDATVDAQKLLSAVFRLK
ERYGKNMIIDFLRGSKSAKITDYMQSLPTYGIGNKSDKNYWQNLIKQLIINGFLKESNEE
FSVLKLTEESNLVLFKHKKVSLQKIKEQAKAVTVAEIETNYTQNKIAENLDLFDELKKLR
RKQAEKENVPPYVIFSDASLMELSTYLPNTKEELNQISGFGEFKIEKYGELFLEVILEYC
NINNLSSKVSEKKQKKQREQKPKKANKNTSGTFATTFQLYKENNSIEEIAKIRNLSINTI
QNHLINFVVDGTINASELVNTNKIENIIEVAKTPKIQSLKVIKEALGDDYSYFEIHVAVA
HYKSQQEV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcttctctagaaattttacagcaatattttggctacgacagtttcaggctagag
caagccaatgccgtggaaaatgtaattgcaaaaaaagacacgtttgttttaatgccaact
ggtggtgggaaatccctttgctaccaagttccggctttagttttggaaggtactgcgatt
gttatttctccattaattgctttaatgaaagaccaagttgatgcactgcgcgtgaatggg
atttctgctgcatacattaattcttcgatgagttctctggaacaaaatgaaactttacat
caattaaaaaatggcgaactcaaacttttatacgtcgcacccgaaaaattaagtgccgat
aacggtgcatttttaaaattgcttaatgaagttaaggtttcattatttgctgtagatgaa
gcacattgtgtttcacattggggccacgatttccgtccggactatttatttctgaatagt
ttaaaaaatcaatttccacaaatcccaatcattgctttaacggcaagtgcagatgaaatt
acaagacaagatatcatcaaacaactgaatcttcagcaacctcttgttttagtttcatcg
ttcgacagagccaatatcaaatattttgtacagcccaaacagtctgtccttcatcacatt
actcaatacctcagtgagcatcccaacgattctggaattatctattgcttatcccgaaaa
gggactgaagaaatgtctaatcagctgaaagaaaatggtatcaattctgctttttatcac
gcaggaatttcatcagccgaacgggcaaaggttcaggaagacttcatcaaagacaaaact
caggtaatggttgcaacaattgcttttggaatggggatcgataaaagtaatgtccgtttt
gtgatgcacgcagatttaccaaaaaatatagaaagctattatcaggaaacgggaagagcc
ggaagagatggtctgccgagtgaagcgattttgttttattctggtgctgatgtgataaaa
cttcgaagatttgctttgatagaaggcaatgaagaacaatctggtctaatgttgcgaaag
ctgcaacaaatggctgattttgccgagatgcaaaaatgccgaagacaatatctgatggag
tattttggagaaaatcatcctggaaattgcaacaattgtgattattgcctcagtgaattt
gaaacctgggacgcaaccgttgatgctcaaaaattactcagtgccgtcttccgactgaaa
gaacggtacggaaaaaacatgattattgattttctgcgtggttcaaaaagtgccaaaatt
acagattatatgcaaagtcttcctacgtatggtattggaaataaaagtgataaaaactat
tggcaaaacctcatcaaacaactaataatcaatggttttctaaaagaatcaaatgaagaa
ttttctgttttaaaattaacagaagaaagcaatttggttttatttaaacataaaaaagta
agcttacaaaaaataaaagaacaagcgaaagcagtaactgtagctgagattgagactaat
tatactcaaaataaaatagcagaaaacctcgatttatttgatgagctcaagaaactcaga
cgtaagcaggcagaaaaagaaaacgttccgccgtatgttattttttctgatgccagtttg
atggaactttcaacttatctgcccaataccaaagaagaacttaatcaaattagtggtttt
ggggaatttaaaatagaaaagtatggagaattatttcttgaagtcattttagaatattgc
aacattaataatttgagcagtaaagtctcagaaaaaaaacaaaaaaaacaacgagaacag
aaacccaaaaaggcaaataaaaacacatctggaacatttgctacaacttttcaactctac
aaagaaaataacagcatcgaggaaattgccaaaataagaaatttgtcaatcaatacgatt
cagaatcatttaattaatttcgtcgtggacggaaccataaatgcaagtgaactagtgaat
actaacaaaatagaaaacatcatcgaagttgcaaaaaccccaaaaattcaatctttaaaa
gtgataaaagaagcgttgggtgacgattattcttattttgaaattcatgtggctgttgcg
cattataaatcgcagcaagaagtttaa
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