Chryseobacterium balustinum: EB354_22365
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Entry
EB354_22365 CDS
T07847
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cbp
Chryseobacterium balustinum
Brite
KEGG Orthology (KO) [BR:
cbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbp03009
]
EB354_22365 (rlmD)
Enzymes [BR:
cbp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
EB354_22365 (rlmD)
Ribosome biogenesis [BR:
cbp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EB354_22365 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Cons_hypoth95
N6_N4_Mtase
MTS
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_11
Methyltransf_4
PCMT
RrnaAD
PrmA
UPF0020
2-ph_phosp
Motif
Other DBs
NCBI-ProteinID:
AZB31778
UniProt:
A0AAX2IG34
LinkDB
All DBs
Position
4803425..4804831
Genome browser
AA seq
468 aa
AA seq
DB search
MRKKKDVILENIKLFAAGAKGVAIGKTEEGKTVLVSGAIPGDVVNARVKKSKSKYFEAEV
KEIVERSPFRVEPKCIHFGTCGGCKWQNMSYEKQLDFKQEEVYNNIKRIGGIDDFETVPI
LGAEEQYFYRNKMEFSFSNARWLSQYEISSEENFGSRDALGFHIPGMWSKILDLKECFLQ
EDPSNAIRLAVKKFAENKGLDFFDVKSQKGFLRTLMMRQNSKGEWMVLFQLYREEKENRT
QLFDFLLEQFPQIKTLVYAINPKQNDSIYDLNVNIYFGDGFLMEEMDGLKFKIGPKSFFQ
TNYKQALELYRKTLEFADLKGDEVVYDLYTGTGTIAQYVARNAKHVIGIESVQEAIDAAI
EHAELNGLTNTTFYCGDMKNVFNDEFLENHPKADVLITDPPRDGMHQKVVEQILKLAPEK
VVYVSCNSATQARDLALMKEHYALVKILPVDMFPQTHHVENIALLIKK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagaagaaagacgtaattcttgagaatataaaactttttgcagcgggtgcaaaa
ggagttgcgataggaaagactgaagaagggaaaactgttttggtttccggagcgattcct
ggagatgtggttaatgcaagagtaaaaaaatcaaaatcaaaatattttgaggctgaagta
aaagaaattgttgaaagatcaccattcagagtggagccgaagtgtattcatttcggaact
tgtggcggttgcaaatggcagaatatgagctacgaaaagcagcttgattttaaacaagaa
gaagtttacaataatatcaaaagaattggtggaatcgatgattttgaaaccgttccgatt
ttgggtgcagaagaacagtatttctacagaaataaaatggaattttctttctctaatgca
agatggttaagccagtacgagatcagttctgaagaaaattttggaagcagagatgcgcta
ggattccatattccgggaatgtggagtaaaattttagatctaaaagaatgtttccttcag
gaagatccatcgaatgcgattcgtttagctgtaaagaaattcgctgagaataaaggttta
gacttttttgatgtgaaaagtcagaaaggtttcttgagaactttgatgatgagacaaaac
tcaaaaggagaatggatggttttattccagctttacagagaagaaaaagaaaaccgtacg
cagctttttgatttcttgttggagcaattcccacagataaaaacattggtgtatgccatc
aatcctaaacaaaatgattcaatctacgatttaaatgttaatatttacttcggagacgga
ttcttaatggaagaaatggacggcttgaaatttaaaattggcccgaaatctttcttccag
accaattataaacaggctttagaattatacagaaaaacccttgagtttgctgatttaaaa
ggtgatgaagtggtttatgatctatatacaggaaccggaactattgctcagtatgttgca
agaaatgcaaagcatgtaattggtattgagtctgtacaggaagccattgatgctgcaatt
gaacacgctgaattaaatggtttaaccaatacgactttctattgtggtgatatgaaaaat
gtgtttaatgatgagttcttagaaaaccatccaaaagcggatgtattgattaccgaccca
ccaagagacggaatgcaccagaaagtagtagagcagatcttaaaattagctcctgaaaaa
gtagtgtatgtaagttgtaattctgcaacgcaggctagagatttagctttaatgaaagag
cattatgctttggtgaaaattttaccggttgatatgttcccgcaaacacatcatgttgaa
aatattgcgttattaataaagaaataa
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