Lawsonella clevelandensis: AL705_00975
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Entry
AL705_00975 CDS
T04080
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cbq
Lawsonella clevelandensis
Pathway
cbq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL705_00975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbq03019
]
AL705_00975
03016 Transfer RNA biogenesis [BR:
cbq03016
]
AL705_00975
Enzymes [BR:
cbq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AL705_00975
Messenger RNA biogenesis [BR:
cbq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AL705_00975
Transfer RNA biogenesis [BR:
cbq03016
]
Prokaryotic type
tRNA degradation factors
AL705_00975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
KH-I_KHDC4-BBP
RNase_PH_C
KH_NusA_1st
KH_2
OB_cyt-4
S1_RRP5
HTH_CLF_N
Motif
Other DBs
NCBI-ProteinID:
ALE18527
UniProt:
A0A0M4LXW0
LinkDB
All DBs
Position
complement(216981..219224)
Genome browser
AA seq
747 aa
AA seq
DB search
MTELREFEVEEGVFETETTIDNGAFGTRNVRFETGRLAKQAAGSAVVYLDDETMMLSCTT
ASKQPREGFDFFPLTVDVEERMYAAGRIPGNFFRREGRPTTDAILTCRLIDRPLRPSFVS
GLRNEVQVVVTMLSLRPGDIYDCVAINAASCSTQLAGLPFSGPVGGVRIALIPTESNPEG
QWVCFPTVEQLKMAVFNMAVAGRIVSEDDGTGSPEIAIMMVEAGATEEVVELVGGGAQAP
TEEVVAGGLEAAKPFIAQLCQAQQQLAGVAAKETAEFPLYPAYQDDSFEAVEKAATAELE
KIYTIADKQEREAADTELKEKVFEELAEQFEGRESEIGGAYKAITKKIIRQRILKDHFRI
DGRDVTDIRALSAEVEVIPRAHGSSLFERGETQIMGVTTLDMLKMEQQIDSLGPEESKRY
IHHYNFPPYSTGDTGRVGSPKRREIGHGALAERALLPMIPSREDFPYAIRQVSEALGSNG
STSMGSVCASTMSLLNAGVPLKAPVAGIAMGLVSDEVDGEMQYQALTDILGAEDAFGDMD
FKVAGTKDFITALQLDTKLDGIPSHVLAAALTQARDARLTILDVMNEAIDAPDELSPYAP
RITSIQIPVDKIGEVIGPKGKQINAITEETGANISIEDDGTVYVSATNGDAAQAAIDLIN
AIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGD
KLQVEIADIDKRGKISLVPVDDSDDNE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgactgaactccgtgagttcgaggtggaagagggcgttttcgaaaccgaaaccaccatc
gataacggtgcttttggcacgcgtaatgtccgtttcgagactggccgtctggcaaagcaa
gctgcgggttccgcagttgtgtacctcgatgacgaaacaatgatgctgtcgtgcaccacc
gcttctaagcaaccccgggaaggttttgacttcttccctctgacggttgacgtggaagaa
cgcatgtatgctgcgggacggatccccggcaactttttccgccgcgaaggtcgcccgacc
actgacgctattcttacctgccggcttatcgaccgtccgctccgccccagcttcgtgtct
ggtctgcgtaacgaggtgcaggtggttgttaccatgctgagcctgcgacccggcgacatc
tacgactgtgtcgccattaacgctgcgtcctgctccacccagctggctggcctgccgttc
tctgggccggttggtggtgtccgcatcgcccttatccccaccgaatccaacccggagggg
cagtgggtgtgcttcccgactgtcgaacagctcaagatggctgtattcaacatggcggtg
gccggtcgtattgtttccgaagatgacggcaccggcagtccggagatcgccatcatgatg
gtggaagctggcgcaaccgaagaggtagtggagctcgtcggcggtggcgcacaagctccc
actgaagaggtcgttgcaggtggtctggaagctgccaagcccttcatcgcacagctttgc
caggctcagcagcagcttgcgggcgtagccgccaaggaaactgcagaattccctctctac
ccggcatatcaagacgattccttcgaggcagtggagaaggctgccacggcggaactggag
aagatctacaccatcgcagacaagcaagaacgcgaagctgccgacactgagctcaaagag
aaggtgtttgaggagcttgctgagcagttcgaaggacgcgagagcgaaattggcggtgct
tacaaggccatcaccaagaagatcattcgacagcgtatcctcaaagatcatttccgtatt
gacggccgtgacgtcaccgacatccgtgccctttccgcagaagttgaggtgattccgcgc
gcccacggttcctctctctttgagcgcggggaaacccagattatgggtgtgaccaccctt
gacatgctgaagatggagcagcagatcgactccctcggccccgaggagagcaagcgctac
atccaccattacaacttccccccttattccaccggcgacaccggccgtgtcggctccccg
aagcgccgtgaaattggccacggtgctctggctgagcgtgccctgctgccgatgatcccg
tctcgtgaggatttcccctacgccatccgccaggtttccgaggctctcggttctaatgga
tccacctcgatgggttcggtctgcgcctccactatgtcgctcctcaatgcaggtgtgccg
ctgaaggctccggttgccggtatcgcaatgggtctggtttccgatgaggtcgatggcgaa
atgcagtaccaggcccttactgacatccttggcgccgaagatgcctttggcgatatggac
ttcaaggtggctggtaccaaggacttcattaccgccctgcagcttgacactaaactcgac
ggcatcccctcccacgtactggcagctgctctcacacaggctcgtgatgcacgcctcact
atccttgatgtgatgaatgaagctattgacgcccccgatgagctgagcccctacgctccg
cggatcactagcattcagatccccgtcgacaagattggcgaggtcatcggccctaagggt
aagcagatcaacgccattaccgaggagactggcgccaatatctctatcgaggatgacggt
acggtctatgtctctgccaccaatggggatgccgcacaagctgccatcgatctcattaat
gcgattgctaacccgcagctcccgaaggtcggtgaacggttcctcggtactgtggtgaag
accaccgcctttggtgcgttcgtgtcgttgctgccgggacgtgacggcctggtacacatt
tcgaaactgggcaagggtaagcgcattgccaaggttgaagacgttgtcaatgttggcgat
aaactgcaggtggagattgctgatattgataagcgaggcaagatctccctggtgcctgtg
gatgatagtgacgataacgagtaa
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