Lawsonella clevelandensis: AL705_01600
Help
Entry
AL705_01600 CDS
T04080
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cbq
Lawsonella clevelandensis
Pathway
cbq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL705_01600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbq03021
]
AL705_01600
03019 Messenger RNA biogenesis [BR:
cbq03019
]
AL705_01600
Transcription machinery [BR:
cbq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AL705_01600
Messenger RNA biogenesis [BR:
cbq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AL705_01600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA
Motif
Other DBs
NCBI-ProteinID:
ALE18615
UniProt:
A0A0M4LY19
LinkDB
All DBs
Position
complement(357186..359090)
Genome browser
AA seq
634 aa
AA seq
DB search
MDNAALAEPTRSRRGKGEGLSSMVIPELRKMAAEMGIKRTSGMRKGDLIEAIQAQQRGGN
HKSQGNKDSQPAPQSGAATSAGNAVEKAKAADDSGKKSGASEQKNDQLGQAKKDTADNDG
NDNRPRRRRNRSNNNGNSGGNTNSGSNGNAGNASAKANVGGNSNGNFAKNSGANSTKGSN
AGAKGGNSTADGGNAAAHGVKDNANEKSDGNQDGNNNRNRNRRDRNNRRDRNNRNNSRNR
DDRDTEIREGDVLQPVAGILDILENYAFVRTSGYSAGPHDVYVSMNMVRKAGLRRGDAIV
GAVRMPREGSKQNHNNRQKFNPLVRIDSVNGLTPELAAQRPEFSKLTPLYPNQRLRLETT
KENITTRLIDLIMPIGKGQRALIVSPPKAGKTTVLQAIANAITTNYPECHLMVVLVDERP
EEVTDMQRSVKGEVIASTFDCPPSNHTTVSELAIERAKRLVEQGMDVVVLLDSITRLGRA
YNNSSPASGRILSGGVDSTALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFE
EFKGTGNAELKLDRRIAERRVFPAIDLNPSGTRKDELLLGAEEYQIVHKFRRVLSGLEPI
PAIELVIKQLKKTKNNREFLMQIAKTTPNMDEEA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggataatgctgcattggcagaacccacccgctcccgccgcggtaaaggcgaaggactc
tcctcgatggtcatccccgaactccggaaaatggctgccgaaatgggcattaaacgcacc
tctggaatgcgcaaaggcgacctcatcgaagctatccaagctcagcagcgcggtggcaat
cacaaatctcagggaaacaaagactctcagcctgcaccgcagagtggtgcagccacgtct
gctggcaatgccgtagaaaaggcgaaggctgcagacgacagtggaaagaagtctggcgcc
tccgaacagaagaacgaccagctgggacaagccaagaaggacaccgccgataacgacggt
aacgataaccgtcctcggcgccggcgcaaccgcagtaataacaacggtaactctggcgga
aacactaacagcggtagcaatggtaatgccggaaacgcatccgctaaagccaatgtgggg
ggaaactcgaacggtaatttcgcaaagaatagcggcgccaatagtacaaagggtagtaac
gctggcgcgaagggcggcaatagcactgccgatggtggtaatgctgctgctcatggcgtg
aaagataacgcaaacgagaagagcgacggtaaccaagacggtaacaacaatcgcaaccgc
aatcgtcgggaccgcaacaatcgtcgggaccgcaacaatcgcaataacagccgcaaccgg
gatgaccgcgatactgagattcgagaaggcgatgtgctgcaacctgtcgcgggcattctc
gacattctcgagaattacgcgttcgtccgtacctccggctattccgctggcccgcatgat
gtttacgtgtcgatgaatatggtgcgcaaggctggtctgcgccgcggtgacgccatcgtg
ggggcggtgcggatgccgcgcgaaggcagcaaacagaatcacaataatcggcagaagttt
aaccccctcgtgcggatcgactccgtcaatggattgaccccggagctagccgcccagcgc
cccgagttttccaagctcaccccgctgtaccccaaccagcggctgcgcctggaaactacc
aaggagaacatcaccacccggcttatcgacctcatcatgccgatcggtaaaggtcagcgg
gcccttatcgtgtcgcccccgaaagccggtaaaaccaccgtgctgcaggcgatcgccaac
gccatcaccaccaactaccccgaatgtcatctgatggtggtgctggttgatgagcgcccg
gaagaagtgacggacatgcagcgtagcgtgaagggcgaagttatcgcctccaccttcgac
tgcccgccctccaaccacaccaccgtgtccgaactcgccatcgagcgggccaagcgacta
gtggaacaaggtatggatgttgttgtactgctggactccattacccgtttgggtcgtgca
tacaacaacagttcccccgcatcgggtcgcatcttgtccggcggtgtggactccaccgcg
ctctacccgccgaaacgtttcctcggtgccgcccgcaacatcgaaaatggtggttcgctc
accattatcgctactgccatggtggagactggttccgctggcgatactgtcatttttgag
gagttcaagggtacgggtaacgcggagctgaagcttgatcgccgtatcgcagagcgacgt
gtcttccccgctatcgatctcaacccctccggtactcgcaaggatgagctgctgctgggt
gctgaggaataccagattgtccacaagttccgccgggtgctctccggtctcgagccgatt
ccggccattgagcttgtcatcaagcaactcaagaagaccaaaaacaaccgcgaattcctc
atgcagatcgcaaagacgacccccaatatggacgaggaggcctaa
DBGET
integrated database retrieval system
