Lawsonella clevelandensis: AL705_06615
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Entry
AL705_06615 CDS
T04080
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbq
Lawsonella clevelandensis
Pathway
cbq03420
Nucleotide excision repair
cbq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AL705_06615
03430 Mismatch repair
AL705_06615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbq03400
]
AL705_06615
Enzymes [BR:
cbq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AL705_06615
DNA repair and recombination proteins [BR:
cbq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL705_06615
MMR (mismatch excision repair)
Other MMR factors
AL705_06615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALE19285
UniProt:
A0A0M5KZQ4
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All DBs
Position
1539656..1543291
Genome browser
AA seq
1211 aa
AA seq
DB search
MRYTPADIARLLGQKFSPTDEQADVISAPPGPLLVIAGAGAGKTETMAARVVWLVANGYV
YPDQILGLTFTRKAAQQLGQRIRQRLQRLAASPDFTGSEADQIRHAIHTSDPDTATYDSY
AGTILRSYGLLLPVETTATIVNAAELSEEAVRLVSQWPHPFAVERATASVVNDLLGLRGE
MANHMVDSATVRDENRCLREGLTDLPKAKRARADLTKDMRDFLSVCEYRDQLLDLIDLFD
NRMREMGYLDFGQQMAYAAELALTHPQVGLSERAHYRVVLLDEYQDTGYAQRVFLRSLFG
NGQDPTLSVTAVGDPIQSIYGWRGASATNLAHFRTDFPAVTTQDDTPQGGTTAHEDSTGA
AVGTASTDTLTAQPAPVNYLLTSWRNPGDILSLASTYTHRLSAATRNAIAVPDLRPAPNA
ADADIHCRYFGSAEDEYAWIARYFRSQFDAAAARGELPPTSAVLVTRNRDSLPMAEALEA
AGVPAEIVNVGGLLSIPEVQDVWAMLRIIADPLDGGAALRILTGPRLNLGASDLRALWGR
ARELRGDLDPADDTDPTTLENLLTMLQDALPQDAAAQVGIADAIDDPGPADRYSPAGYTR
LQQLRADVRHLRKRLGQPLPELIAEVERTIGVDVEVEARLDPGAGHLTGRHHLDAFADAV
ASFCRGANPSLGSLLAYLQQAAESEGGLAPGTVTVRRNCVQIITIFGAKGLEWECVAIPN
LSQREFPPARGRTNWVKTAAELPANLRGDTAVLLPGAELPSGIPTFSAADATDRSEYWQQ
LTQHLTDLKAMELEEKLRLMYVAITRTERSLLLTGHGWSYHDITFHEPSEYLRDAYQWAE
TIAVDYGADADIFPLLSYDDQTEPTPPHVVTTHQRGTLTIHPYWVAAPAKCITTPKGELV
PDPAFHPLTARDASATWPVDHLADSPHIRQVHTALYQAVESAGRPAGGQQTSPLPATAAV
QALAQDTDVLLAEYLHQQAGDDPTARTVTLPTRLTASQIVALREDPEDFARRLRRPIPFK
PNRYARRGTDFHTWVEHHLSGDLGTLVDLEEIMDARDDIPEPVSLTRLKETFAASSWAQR
TTSMVEVPFDVSLGSVVINGRIDAVFRDDADHYTVVDWKTGAIPRTTRDRTTKALQLATY
RIAFHRIINVQRAEHGQPPLPLGNIRAAFYYVAHDYTLWLDELADSAELERLIGDLTTST
ADPVEGIPGNG
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgcgctacacacctgctgacatcgcccgcctcctcggccagaaattctcacccaccgac
gaacaagctgacgtcatctccgcccctcctggccccctcctcgtcatcgctggagcggga
gcagggaaaaccgagacgatggcggctcgggtagtgtggcttgtcgccaatggctatgtg
taccctgaccagatcctcgggctcaccttcacccgcaaagccgcccaacagctcggacaa
cgtatccgtcagcggctccaacggctcgccgccagccccgacttcaccggctctgaggca
gaccagatccgccacgccatccacaccagtgacccggataccgccacctacgactcctac
gcgggcaccattctgcgcagttatggcctgctcctccctgtcgaaaccactgccacgatc
gtcaacgccgctgaactctccgaagaagcggtccgcctagtctcccaatggccgcacccc
ttcgccgtcgaacgagccaccgccagcgtcgtgaacgacctgcttggtctccgtggagaa
atggccaaccatatggtggactctgccacagttcgcgacgaaaaccgttgccttcgtgaa
ggcctcaccgatcttcccaaagcgaagcgagctcgcgccgacctcaccaaagacatgcga
gacttcctcagcgtgtgcgagtaccgagaccaactactcgaccttatcgacctcttcgat
aaccgcatgcgcgagatgggctacctcgacttcggccaacagatggcctacgccgccgaa
cttgccctcacccacccgcaggtcggcctctccgaacgtgctcattaccgagtcgtcctc
ctcgacgaataccaggacaccggctacgctcagcgtgtcttccttcgctctcttttcgga
aacggccaagaccccaccctcagtgtcaccgcagtcggtgaccccatacaatccatctac
ggctggcgtggtgcctccgccaccaatctggctcatttccgcaccgattttcccgccgtc
accacccaggatgacacccctcagggtggcaccactgcccacgaagacagtaccggcgca
gccgtgggtacagccagtaccgacaccctcaccgcacagcccgcccccgtcaactatctc
ctcaccagctggcgcaaccccggcgacattctcagcttggcaagcacctacactcaccgg
ctcagcgccgccacgcgtaacgccatcgccgtccccgacctgcggcccgcccccaatgcg
gcagacgccgacatccactgccgctatttcggcagtgccgaggacgaatatgcctggatc
gcccgctacttccgcagccaatttgacgccgccgctgcgcgcggagaactaccccccacc
agtgctgtactcgtcacccgcaaccgagattccctccccatggcggaagcgctcgaagca
gcaggcgtccccgccgaaatcgtcaatgttggcggtcttctctccatccccgaagtacaa
gatgtgtgggccatgctccgcatcattgccgaccccctcgacggtggtgccgccctccgc
atcctcaccggtccccgactcaatctcggcgccagtgacctacgtgctctttggggacgc
gcccgcgaactccggggagacctcgaccccgccgatgacaccgaccccactaccctcgaa
aacctgctaaccatgctgcaggacgctcttccgcaggatgctgctgcccaagtggggatc
gccgacgctattgatgatcccggccccgcagaccgctactcacccgccggatacacccgc
cttcagcaactccgcgctgacgtcaggcatctccgcaaacggctcggtcaaccactcccc
gaacttattgcggaagttgaacgcaccatcggagtagacgtcgaagtagaagcccgcctc
gaccccggggctgggcacctcaccggacggcaccacctcgacgccttcgccgatgccgtc
gcctccttctgtcgcggcgccaaccccagcctcggctccctcctcgcttacctccagcaa
gccgctgaatccgaaggtggtctcgcccccggcaccgtcactgtccgccgtaattgcgtt
caaatcatcaccatctttggagcgaaagggctggaatgggaatgtgtcgccatcccgaac
ctctcccagcgtgaattcccacccgctcgtggccgcaccaactgggtgaaaaccgccgct
gaactccccgccaacctccgcggtgacaccgccgtactgctccccggggctgaacttccc
tccggcatccccacctttagcgcagccgacgccaccgaccgcagtgaatactggcagcag
ctcactcagcatctcaccgatctcaaagccatggagctggaggagaaactccgcctcatg
tacgtcgccatcacccgtaccgaacgctccctgttgctgaccggacacggctggtcctac
cacgacatcaccttccacgaaccctccgagtaccttcgcgacgcctaccagtgggccgaa
accattgccgtcgactacggtgcagacgccgacattttccccctactcagctatgacgac
cagacagaacccacaccgccgcatgtcgtcaccacccatcagcggggcactctcaccatc
cacccctactgggtggcagcgccggcgaagtgcatcaccactccgaaaggggaactcgtt
cccgaccctgctttccaccccctcaccgcccgcgatgccagcgctacctggcccgtcgac
catctcgccgacagtccccacattcgacaggtccacaccgccctctaccaggcggtcgag
agtgctgggcgaccagcgggcggccagcagaccagccctctccccgccactgcagcagtg
caggcactcgcccaagacaccgacgtccttctcgccgaatacctgcatcaacaggccggt
gacgaccccacagcccgcacggtcacccttccgacccggctcaccgctagccaaatcgtg
gcactacgggaggatccagaggatttcgcccgccggctccgccgccccatccccttcaaa
cccaatcgctacgctcgccgcggcaccgacttccacacctgggtggagcaccacctctcg
ggggacctcggcaccctagtcgacctcgaggagattatggatgcgcgtgacgacattccc
gaaccagtgtcgctgacgcgtctcaaagagacctttgccgcctccagctgggcacaacgc
accacgtccatggtggaagtgcccttcgatgtctccctcggcagcgtcgtcattaatggc
cgcatcgatgcggtattccgtgacgacgccgaccactacacagtggtggactggaagacc
ggtgctatccctcgcaccacccgcgaccgcaccaccaaagcactccagcttgccacttac
cgtattgccttccatcgcatcatcaatgtgcagcgggctgaacacggccaaccgccccta
ccattagggaacatccgggccgcattctactatgttgcccatgactacaccctctggctc
gatgagctcgccgattctgccgagttggagcgactcatcggcgatctcaccacatccact
gccgatccagtggaaggaatccctggcaacggctaa
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