Lawsonella clevelandensis: AL705_07125
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Entry
AL705_07125 CDS
T04080
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cbq
Lawsonella clevelandensis
Pathway
cbq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL705_07125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbq03019
]
AL705_07125
03009 Ribosome biogenesis [BR:
cbq03009
]
AL705_07125
Enzymes [BR:
cbq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AL705_07125
Messenger RNA biogenesis [BR:
cbq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AL705_07125
Ribosome biogenesis [BR:
cbq03009
]
Prokaryotic type
rRNA processing factors
AL705_07125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
FYDLN_acid
PCB_OB
ACT
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
ALE19346
UniProt:
A0A0M4MCR5
LinkDB
All DBs
Position
1652982..1656341
Genome browser
AA seq
1119 aa
AA seq
DB search
MWPLGTDAPGGKGDSVLPESTTVEAVLADLPQKIRVHVLAKRLGMASKDLIAALAQHGVT
VTSAQSSVTSDVAAQFVATLLADTPAELVAADAATATASDPERPVPSQDDTAESASAAAS
PFMNPFTAVEHAEPMTAPLPQDPFSTGAVANPFAVNAMLQATAPIVVTAQDMGRDEDDEE
DAADQEENDSRQSDDEGSPSARRRRRRGRRGRGRGRGDDSDTSEDSAEGTHRDADTTDRT
DNTTQSGSKSGQAGNKKKQQKQTSPVEAEENATTTTAAEDTEAAAEGGEDTSSTHRRRRR
RRRSDVDTDDSTQGDPPNTVVHERGSTRRRRTSSSDEVQGISGSTRLEAKRQRRREGRDN
ARNRIPVLSEAEFLARRESVERTMVVREKERSDHPGVTTQVGVLEDNILVEHFVTSDTQA
SMVGNIYLGRVQNVLPSMEAAFIDIGRGRNAVLYAGEVNWAAAGLGGKSRKIEQALSTGD
MVVVQVSKDPIAHKGARLTTQISMAGRYLVYVPDGSSAGISRKLPDTERKRLKGILKNIV
PGDAGVIIRTAAEDASEEDLKRDIDMLHEQWLSVQQAAEEAQQKADGKARTLHEEPTMLV
KVVRDLFNDDFKKLVVEGERAWGTITDYVQKVAPQLEQRVERWENTGVDVFQAYRVDEQL
AKALDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGSGGNLEETVTRNNLEAAEEIVRQL
RLRDIGGIVIIDFIDMVLESNRDLVLRRLREALGRDRTRHQVSEVTSLGLVQLTRKRLGT
GLLEAFSKPCPHCSGTGYILQEDPVESITSGNNAEDLRGGRRRKGRNAEKNEAAKGGKSK
DKNSADKEASSKGSDGGKDHQGPNPSEHPMMKAMGRKKDDDSSAATGTTPKVTVDASSQE
SISSESSEQNSQQAAPVNAEKGAATSAETVDNGFAVDTADESGEPTARRRRRRGRRHGTG
PDQQNDEADLAAEGEDAEVATPLESTDSAETTADRSQGEHSGKKSGKKGSKKSGKDVRPT
QASTPARDAEFVLPAENASSSLPSVVEVAVSETATPRKRRGARRATQAAGSATAHAEPAA
PAERKEVVSGVLAAAPVAVNTSVEEKAPRRARRRATRSS
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
gtgtggccgctcggtaccgatgcgcccggaggtaaaggagatagtgtgctgccagaaagc
accacggtagaagctgtacttgcagacttgccacagaaaatccgtgtccacgtcctcgcc
aagcgcctgggcatggcctcaaaagatctgatcgccgcgcttgctcagcacggcgttacc
gtcacgtctgcccagtccagcgtgacatctgacgttgcggcacagttcgtcgccactcta
ctcgctgacacgcccgcagaactggtagcagctgacgctgctaccgccaccgcgtccgat
ccggaacgccctgttccttctcaggacgacacggcagaatctgcttcagcagcagctagt
cccttcatgaacccctttactgcggtcgagcatgccgaacctatgacggctccgctcccg
caagaccctttcagcactggtgccgtcgcgaaccccttcgccgtgaacgccatgctgcag
gcaactgcgcctatcgtggtcaccgcccaggatatgggaagggatgaggatgacgaggag
gacgccgcagaccaggaggagaacgactcccggcagagtgatgatgagggctcgccttcc
gctcgccggcgccgtcgccgcggacgccgtggccgtggccgtggccgcggtgatgactcc
gacacctccgaagactcggcggagggtacccaccgcgacgcggacaccaccgaccgaaca
gacaacaccacccaatccggctcgaagagtggacaagccggcaacaagaaaaagcagcag
aagcagacctcccctgtagaagcagaggagaatgcgaccacaacgaccgctgctgaggat
acagaagccgcagctgaggggggagaggacacgtcctcgactcaccgtcgtcgtcgccgg
cgtcgccgcagcgacgttgataccgacgacagcacccagggcgatccgccgaacacggtg
gtgcacgaacggggcagtacacgccgtcgccgcacctccagctccgacgaagtacaaggt
atctccggctctacccgactcgaggccaagaggcagcgtcgccgtgaaggccgtgacaac
gctcgcaaccgcattcctgtgctcagcgaggctgagttccttgcacgccgtgagtccgtc
gaacggaccatggtggtgcgagagaaggagcgttccgaccacccaggagtcaccactcaa
gtgggtgtgttggaagacaacattctggtggagcacttcgtcacctccgacacccaggca
tccatggtgggcaatatctacctgggccgcgtgcagaatgtgctgcccagcatggaagct
gccttcatcgacatcggacggggtcgcaatgcggtgctctacgccggtgaagtgaactgg
gctgctgccgggctgggaggcaagtcccgcaagatcgagcaggctctctcgactggcgac
atggtggtggtgcaggtttccaaggaccccattgcccataaaggtgcgcgtctgacgact
cagatctcgatggcaggacgctacctggtgtacgtgccagatggaagcagcgctggaatt
tcccgcaagctacccgatactgaacgcaaacgcctaaagggtattctcaagaacattgtt
cccggtgacgccggagtgattattcgcaccgctgctgaggatgcctcggaggaggatctg
aagcgcgatattgatatgctgcacgagcaatggctatcggtacagcaggccgctgaggaa
gctcagcagaaagcggacggcaaggctcgcaccctgcacgaagaacccaccatgttggtg
aaggtcgtgcgggacctcttcaacgacgacttcaagaagctcgtcgtggaaggtgagcgc
gcctgggggaccatcactgactatgtgcagaaggttgcaccgcagctggaacagcgggtg
gaacgctgggagaacacgggcgtggatgttttccaggcctaccgtgtcgacgagcaactg
gctaaagcacttgatcggaaagtttggctgccctctggcggtactctcgtcatcgaccgc
actgaagccatgacggtgatcgacgtcaacaccggtaaattcacgggctcgggcggaaac
ctggaagagaccgtcacccgaaacaatcttgaagctgccgaagaaattgtgcgccagctg
cgactgcgcgacattggtggcattgtcattatcgacttcatcgatatggtgctggaatcg
aaccgggatctcgtgctgcgtcgcctccgggaagcgctcggtcgcgaccgcacccgccac
caggtttcagaagttaccagtctggggctcgtccagctgactcgcaagcgcttaggtact
ggcctgcttgaagcattctcgaagccgtgcccgcactgctctggcaccggctacatcctg
caagaagacccggtggagtccatcaccagtggcaacaacgcggaagatctgcgtggtggg
cgacgccgcaaaggccgcaatgcggagaagaacgaggcggccaagggcggaaagtcgaag
gacaagaactccgcggataaggaggcgtcgtccaagggcagcgacggcggtaaggaccat
caggggcccaaccccagcgagcatcccatgatgaaggcaatgggtcggaagaaggacgac
gatagttccgctgccacgggcaccacacccaaggtcaccgttgatgcatcttcgcaggaa
tccatttccagcgagagcagcgagcagaacagtcagcaggcggcgcctgtgaacgctgaa
aaaggggcggcgacatcggcagaaacagtagataatggctttgctgtggacactgccgat
gaatccggagaacccactgcgcggcggcgtcgccgacggggacgccggcatggtaccggg
cctgaccaacagaacgatgaggcagacctggctgccgagggtgaggacgcggaagttgcc
actcccctcgaaagcacagattctgctgagacgacagcggaccgttcccaaggagagcat
tccggcaagaagtcagggaagaaaggctcgaagaagagcggcaaagacgtgcgtcccacg
caggcgtccactccagcacgcgatgctgagtttgtcctaccggcggagaatgcctcgtca
tccctgccgtcggtagtcgaggtagcggtctcggagactgcaactcctcgcaagcgccgc
ggagcacgtcgtgccacccaggccgccggatcggctaccgcacatgcggaaccagcggct
ccggctgagagaaaagaagtggtctctggtgtgctggcagctgccccggtggccgtaaat
accagtgtggaggagaaggcgccacgacgcgcacgtcgccgtgccacccgctcttcctag
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integrated database retrieval system
