Caenorhabditis briggsae (nematode): CBG_00083
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Entry
CBG_00083 CDS
T01054
Symbol
Cbr-pgp-13
Name
(RefSeq) Protein CBR-PGP-13
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CBG_00083 (Cbr-pgp-13)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbr02000
]
CBG_00083 (Cbr-pgp-13)
04147 Exosome [BR:
cbr04147
]
CBG_00083 (Cbr-pgp-13)
04090 CD molecules [BR:
cbr04090
]
CBG_00083 (Cbr-pgp-13)
Enzymes [BR:
cbr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
CBG_00083 (Cbr-pgp-13)
Transporters [BR:
cbr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
CBG_00083 (Cbr-pgp-13)
Exosome [BR:
cbr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CBG_00083 (Cbr-pgp-13)
CD molecules [BR:
cbr04090
]
Proteins
CBG_00083 (Cbr-pgp-13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
RsgA_GTPase
AAA_29
AAA_30
Zeta_toxin
AAA_24
SbcC_Walker_B
DUF815
APS_kinase
DEAD
MeaB
Motif
Other DBs
NCBI-GeneID:
8587220
NCBI-ProteinID:
XP_045091466
WormBase:
CBG00083
LinkDB
All DBs
Position
X:complement(14254220..14258636)
Genome browser
AA seq
1334 aa
AA seq
DB search
MDDKEPKSSISKTSSYDDDDDEKVEYFPSVFEKAVNFLLCRLVIISHFQRIVKFFRCDLS
SQVLEFKPVSLLQLVFPLRHTVRLHSSDNWRRYFHHLRRFSTGSCHHFVSYTFKELLKFK
IQNFRGRLTNVLLVVDPLSKEFKNKAMENVYIFLGLGIFVSINDFCQYMCFQRVCSRMMT
QMRNRYISSILRQNAGWFDKNLSGTITTRLNDNMERIQDGVGDKLGVLIRGISMVLTSVI
ISLVYEWRLALMMVGLIPVSTICMTLLSRFLEKSTGEELEKVGIAGAIAEESLMGVRTIQ
AFNGQEEMVAKYEKHLNSGKRHAIIGGFWSGFFGGMFFFWLLAFMGCGILYGGYLLKVGI
IKSPGDVFIIIMAMLLGAYFLGLISPHLMVLLNARVAAASIYKTIDRVPKIDPYSKAGKK
LDRVVGKVTFRNVHFRYPTRKEAKVLNGLDLTVEPGTSVALVGHSGCGKSTSVGLLTRLY
EPEDGSVQIDGVDVRDLNMDWLRNIVGIVQQEPILFNDTIHNNLLIGNPDATREKMIEVC
KMANAHDFIKKMPKGYDTLIGDGGVQLSGGQKQRVAIARTLIRDPKILLLDEATSALDAQ
SESVVQSALNNAARGRTTIMIAHRLSTIREADKIVFFEKGVIVEAGNHGELVALGGRYYN
LVKAQQFKQDPEDIELEAEQEDQFDEFEKPTMFTRQVSTRSSRSSGRSGSDEFRRGTLAN
HSFDRFRKPSHVPTAEDEAFALKVKETMEKDEEVTAGYLDIFKNAHGNYGYMFIGLVAAL
IRGLDLPAFALLLSWVFEGFEFVPYGGKMMHRFVMSVIAHCGVGLGIWFFQTLSTVMFAI
VSENLGVRFRVDAFRNLLYQDSAYFDNPAHAPGSLITRLAADPPSVKAVVDGRMMQVIYA
FSAVVACVTIGFIYCWQVAILGTSLIFFLGFVMCGLAFKITILAVEHMQNDDAGKVAIEI
IENVKTIQLLTRTKRFLNSYENESKKRKTTELRKSVFEAINYSITQNFMYYMSCFCFALA
IRVINEGDQPVDKTFRSLMAMMLCCEGIILSAQFFPQFVGAKSAAGQMFNLIYRKPQTGD
VKTGSQPEIRGNILFENVKFSYPQRPHQPVMKTLQWTALRGQTVAIVGPSGSGKSTCISM
LERFYDVTGGALRIDGQDIRTMSLYHLRTQMALVGQEPRLFVGTIRENICLGLKDVPLEK
INQALELANANRFLGNLPAGIDTEVGERGGQLSGGQKQRIAIARALVRDPKILLLDEATS
ALDSESEKAVQEALDRAREGRTCITIAHRLSSIQNSDLIVYIDDGRVQEAGTHNELMHMK
GKYFELIKKQDLAI
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaaagaaccaaaatccagtatttcgaaaacatccagttacgatgatgacgac
gatgaaaaagtggaatacttcccatctgtgtttgaaaaagcagtcaattttttactttgt
cggttagtgattatttcacattttcaaagaattgttaaatttttcagatgtgacctctcc
tcacaagttcttgaattcaaaccagtttcattattacaattggtatttccgcttcgccac
accgttcgactacattcttctgataattggcgtcgttacttccatcatctccggcgtttc
tcaaccggttcttgccatcatttcgttagttacacattcaaggaacttttgaaatttaaa
attcaaaattttaggggtcgattgacaaatgtgttgctggtagtagatccattgagcaaa
gaatttaagaataaagcaatggaaaatgtgtatattttcttgggtcttggaatatttgta
tccataaacgatttctgtcagtacatgtgcttccaacgggtttgtagtcgtatgatgact
caaatgagaaaccggtacatttcttcgatcctccgacaaaacgccggatggtttgacaag
aacctctcaggaactattactactagactcaacgacaacatggaacgaattcaagacgga
gttggagacaagctgggagttttgattcgtggtatttcaatggtcctgacttccgtgata
atctcccttgtatatgaatggagattggcgctgatgatggtcggtctcattccggtgtct
acgatttgcatgacacttctgtctagattcttggaaaagagcacaggagaagaattggaa
aaagttggaatagctggtgcaattgccgaggagtcactgatgggtgttcgaactatccaa
gcattcaacggacaggaagaaatggttgccaagtatgaaaagcatttgaattctggaaag
aggcatgctattatcggtggattctggagtggattcttcggtggcatgtttttcttctgg
ctgttagcattcatgggctgtggaattctttatggtggataccttttaaaagttggaatc
attaaatctccaggggacgtgttcattattatcatggcaatgctactcggtgcatatttc
cttggtctcatctctcctcacttaatggttcttctcaatgctcgtgttgctgctgcttct
atttacaaaaccattgacagagttccaaaaattgatccatactctaaagctggaaagaaa
ctggatagagtagtaggcaaggtgacatttcgaaatgttcacttccggtatccaactcgg
aaagaggcaaaagttctaaacggactcgatttaaccgtcgaacctggaacttctgttgca
ttggttggccattcaggatgtgggaagtcaacatcggttggtcttctaacaagattatat
gagccagaagatggaagcgtacaaattgatggagttgacgtaagagacctgaatatggat
tggttgagaaatattgtgggtattgtgcaacaagagccgattctattcaatgacaccatc
cacaataatttacttattggaaatcctgatgccactcgtgagaagatgattgaagtttgt
aagatggcaaatgcacacgatttcattaagaaaatgccaaaaggatacgatacactgatt
ggagatggtggagtacaactctctggaggacagaagcaacgtgtcgccattgctagaact
cttattcgtgatccaaagattctacttctcgatgaagctacatcagctcttgatgctcaa
tctgaaagtgtggttcaatctgcactgaacaatgctgccagaggaagaactactattatg
attgcacatagactctctacaatccgtgaagctgataaaattgtcttcttcgagaaggga
gtcattgtggaagctggaaatcatggggagctagttgcacttggaggaagatactataat
ttagtgaaggctcaacagttcaaacaagatccggaagacattgagctggaagctgaacaa
gaggatcagtttgatgagtttgagaagccaactatgttcaccaggcaagtgtctactcgg
agttcaagaagttcaggaagatctggttccgatgagttccgccgaggaacactcgctaac
cactcgttcgaccgtttccgtaagccatcacatgttccaactgctgaagatgaagcattc
gcattgaaagtgaaagagactatggagaaagatgaagaagtaactgctggatatcttgat
attttcaaaaatgctcatggaaactacggctacatgttcattgggcttgtggccgcgctt
atcagagggctcgatttgccagcatttgcattattgttgtcttgggtgtttgaaggtttt
gaatttgtcccgtatggaggaaaaatgatgcaccgatttgtcatgtccgtcatagctcat
tgtggagtgggtcttggaatttggttctttcaaacactgagtactgtcatgtttgcaatt
gtttctgaaaaccttggtgttcgcttccgtgttgacgctttccggaaccttctctatcag
gattctgcctattttgataatccagctcatgctccaggcagtttgatcaccagacttgcc
gcggaccctcccagtgtgaaagcagttgtagatggaaggatgatgcaagtaatctatgcg
ttctctgctgtggtggcatgtgtgactattggttttatctattgctggcaagtggctatc
cttggaacgtcactaattttcttcttgggatttgttatgtgtggattagctttcaagatt
acaatattagcagtggagcatatgcagaatgatgatgctggaaaagtggccattgaaatt
atagaaaatgtgaaaacgattcaacttttgacacgaacaaaacgatttttgaatagttac
gagaacgagtcgaagaaacgaaagacaacagaactccgaaagtctgtcttcgaagctatc
aactacagtatcacccaaaacttcatgtattacatgtcgtgtttctgttttgcactggcc
atcagagttattaacgaaggagatcagccagttgacaagacattcagaagtcttatggca
atgatgttatgttgcgaaggaatcattctgtccgctcaattcttcccacaatttgttgga
gccaagtcagcagcaggacaaatgttcaatttaatctaccgtaaacctcagacaggagat
gtaaaaactggatctcagccggaaattcgtggaaacattctattcgaaaatgtcaagttt
tcttaccctcaacgaccacatcaaccagtaatgaaaaccttgcaatggactgctctccga
ggacaaactgttgcaattgtgggaccatctggatcagggaaaagtacatgcattagtatg
ctcgagcggttctatgacgtcactggaggtgcactccgaattgatggacaggatatccgg
accatgtctttgtatcatttgagaacacaaatggctttggttggacaagagccaagacta
tttgttggaacgattcgagagaatatatgtcttggattgaaggatgtgccacttgagaaa
ataaatcaagcactggaacttgccaatgctaatcggttcctgggaaatttgccagctgga
atagataccgaggttggagaaagaggaggacaactatctggaggtcagaaacaaagaatt
gctattgccagagcattagttcgtgaccccaaaattttgctactcgatgaagcgacatca
gcattggattcggagtctgaaaaggcagtacaagaagctctcgatcgtgctcgagaaggt
cgaacatgcattaccatcgcacatcggctgtcttcgattcaaaactccgatcttattgtc
tacatcgacgacggacgagttcaagaagcgggaactcacaacgagctgatgcatatgaag
ggaaaatatttcgagctcattaagaaacaagaccttgcaatttga
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