Caenorhabditis briggsae (nematode): CBG_00086
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Entry
CBG_00086 CDS
T01054
Symbol
Cbr-pgp-12
Name
(RefSeq) Protein CBR-PGP-12
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CBG_00086 (Cbr-pgp-12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbr02000
]
CBG_00086 (Cbr-pgp-12)
04147 Exosome [BR:
cbr04147
]
CBG_00086 (Cbr-pgp-12)
04090 CD molecules [BR:
cbr04090
]
CBG_00086 (Cbr-pgp-12)
Enzymes [BR:
cbr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
CBG_00086 (Cbr-pgp-12)
Transporters [BR:
cbr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
CBG_00086 (Cbr-pgp-12)
Exosome [BR:
cbr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CBG_00086 (Cbr-pgp-12)
CD molecules [BR:
cbr04090
]
Proteins
CBG_00086 (Cbr-pgp-12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_30
RsgA_GTPase
AAA_16
AAA_29
DUF815
AAA_24
AAA_7
SRP54
Zeta_toxin
ATP-synt_ab
AAA_28
SbcC_Walker_B
MCM4_WHD
Motif
Other DBs
NCBI-GeneID:
8587222
NCBI-ProteinID:
XP_045091468
WormBase:
CBG00086
LinkDB
All DBs
Position
X:14276841..14281573
Genome browser
AA seq
1360 aa
AA seq
DB search
MKWRKNGDAIAPTDVIGEEVGKKKQENQTVDLEDVVSIDSDEEPKFVYEPSHLEKFINYM
LCRGDLAKRELSVKPVTLLGLFRFAERRDHIILLIGILLSFLSGVAQPGLGVIAGGMTNT
LIVYNVTSPQFLDSALMNVYLFGGIGVVVLIINFIQVSYSNQIIYMCFQNVCIRIVTKLR
EEYIKSILRQNAGWFDKNHSGTLTTKLHDNMERIHEGIGDKLGVLIRGIVMFGTGIVISL
FYEWRLALMMMGIGPLCCICMSLMSRVRDCFSNIHNNEVLVNVVIHIERISRRWKSWKYC
RGVVDGCQNSTGVQWSGRDGWKVQYFFSSSYTAELGKGKSYAVKKGLWGGFFGGIFLLIL
FTYFGGGIFYGGQLLRWKIIENPGDVFIVVFSMLIGAYFLGLISPHLMVLLNARVAAATI
YEVIDRVPEIDAYSNEGQKIDKIVGRVVFENVHFRYPTRKKAKVLNGLNLTIEPGTSVAL
VGHSGCGKSTSVGLLTRLYEQEDGKVMIDGHEVRNLNIDWLRKVVGIVQQEPILFSGTIH
NNLLIGNPNATRDDMIRVCKMANAHEFILKMPKGYDTVIGDGGVQLSGGQKQRVAIARTL
IRDPKVLLLDEATSALDAQSESVVQSALNNASKGRTTIMIAHRLSTIREADKIVFFESGV
IVESGTHDELVALGGRYAALVKAQQFKEADEVDDDVEEDITARIEKQMPSRQVSYHGSCV
SLASADLEIGYASAFNSFNLKQAQDDIENEDFAEEVQRVMEEDGVITSGYYDIFKNAKGN
YWYLSMGTVFAIMRGSELALLAIMFGYVFEAFEKPDAEMARELVIIFILYGCLGLYVFIT
QVLSSTLFTIVAENLGLKFRVQSFKNLLYQDASFFDNPAHAPGKLITRLATDAPNVKAVV
DTRMLQVIYSMTSITINLVTGYACCWQIAVVGTVMIALFALLMISMAYKIARVNLKQIKR
DEAGKIAIEIVENVKTIQLLTSTEHFLTEYTTALELQHKSEMKKAYIQALNNAISQTFMY
FAMFVCYAVGTPLMYNGIVDPNGAFRAINSMMMGSVAVMHSSHNFPEFVKAKTAAGMLFK
LIYRKPKTGDVMKGNQLDIRGNILFESVKFSYPQRPLHPVMTDLHFTARNGQTVALVGPS
GTGKSTCIAMLERFYDVSGGALRIDGQDIKTLSLHHLRTQMALVGQEPRLFAGTIRENVC
FGLKDVSLDDENQVIKIKKLQVPIEKVNQALELANASRFLANLPSGIDTEVGEKGSQLSG
GQKQRIAIARALVRDPKILLLDEATSALDSESERAVQEALDRAREGRTCITIAHRLSSIQ
NSDLIVYIDQGKVQEAGNHNHLMSLRGKYYDLIKKQDLTS
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggcggaagaatggagacgcaatcgcgccaacagatgtaatcggagaagaagtg
gggaagaagaaacaagaaaatcagactgtggatctggaagatgtggtgtccatcgattcc
gatgaggaaccaaaatttgtgtacgagccgtcacatttagaaaagtttattaattatatg
ctatgccgtggagatttagccaaacgggagctgtctgtgaaaccagtgacacttttggga
ttgttccggtttgctgaacgaagggaccatatcattcttttgatcggaatacttctttct
tttctgtccggagttgctcagccaggtcttggagtcattgctggtggaatgaccaataca
ctgattgtgtacaatgtcactagccctcagtttttggatagtgcacttatgaacgtctat
cttttcggaggcatcggagttgtagttctcataatcaatttcattcaggtatcctattct
aatcaaattatttatatgtgctttcaaaatgtttgcattcgaattgtgacaaaactgaga
gaggaatacatcaaatcaattctacgtcagaatgctggttggtttgataagaatcactcg
ggaacgctgacaacgaaactacatgacaacatggagcgcattcatgaaggaattggagat
aagcttggagtcctaatccgtggtatcgtgatgtttggaactggaattgtgatttcgttg
ttctacgaatggagattggcactgatgatgatgggcatcggaccattgtgttgtatttgc
atgtctttgatgtccagagtaagggattgtttttcgaatattcataataatgaggtttta
gtcaatgtcgtcatacacatcgaaagaattagcagacgttggaaaagctggaagtattgc
agaggagtcgttgatgggtgtcagaacagtacaggcgttcaatggtcaggaagagatggt
tggaaggtgcaatattttttttcatcttcgtacactgctgaactgggaaaaggaaaatct
tatgcggtcaagaaaggattgtggggtggattttttggtggaatttttcttctgattctg
ttcacttattttggtggtggcatcttctatggtggtcaacttcttcgttggaagattatc
gaaaaccctggagacgttttcattgttgtgttctccatgctcattggtgcctacttcctg
ggtctcatctctccgcacctaatggttttattgaacgcaagagttgccgcagcgacgatt
tatgaggttattgacagggttcctgaaatagatgcctattccaatgaaggtcaaaagatc
gacaagattgttggaagagtagtctttgagaatgtgcactttcgatacccaaccagaaag
aaggcaaaggttttgaacggattgaatctcacaatcgagccaggaacgtctgtggcactt
gttggacactctggatgtggaaagtcgacatctgttggattgttaactagactttacgaa
caagaagatggaaaagtgatgattgacggtcatgaagtgagaaatctgaacattgactgg
ctgagaaaagttgtgggaatcgtgcaacaggagcctatcttattcagtggtaccatccat
aacaatttgttgattggaaatcccaatgcaactagagatgacatgattagagtgtgcaaa
atggcaaatgctcatgaattcattttgaaaatgccaaagggttacgatacagtaattgga
gatggtggagtgcaactgtcgggaggacaaaaacaacgtgttgcgattgcaagaacattg
attcgtgatccaaaagtcttattgctcgacgaagccacatccgctcttgatgctcaatct
gaaagtgtggtgcaatctgcactgaacaatgcgtccaagggaaggaccactattatgatt
gctcatagactttcaacaatccgtgaagccgataaaattgtatttttcgaaagtggagta
attgttgaaagtgggactcatgacgaattggtggctctaggaggacgatatgccgctctt
gttaaggctcaacagttcaaagaggcagatgaggtggatgacgatgttgaagaagacata
acagccagaattgagaaacaaatgccatcaagacaagtcagctaccacggctcgtgtgta
tcattggccagtgcggatttagaaattggttacgccagtgctttcaacagcttcaacctc
aaacaagcacaggatgatatagaaaatgaagattttgctgaagaagtccagagagtaatg
gaggaggatggtgttattacatctggatactatgatattttcaaaaatgcaaaaggaaac
tactggtatttgtcaatgggaacagtttttgctatcatgagaggctcggaacttgcactt
ctagctattatgttcggatatgtgtttgaggcatttgaaaaacctgatgcagaaatggct
agagaacttgtgatcattttcattttatatggatgtctcggactctatgtgttcatcacc
caagttctcagtagcacactattcacaattgttgctgaaaacttaggactgaaattccgc
gttcaatccttcaagaaccttctctatcaagacgcatcttttttcgataacccagctcac
gctcccggaaagctcatcaccagactcgcaactgatgctccaaatgtgaaagctgtcgtg
gataccagaatgcttcaagttatctattctatgacctctatcactatcaatttggtcacc
ggttacgcttgttgttggcaaatagctgttgtaggaacagtaatgattgctttattcgct
ctgttgatgattagtatggcttacaaaatcgcgagagttaatttgaaacagatcaagaga
gatgaagctggaaagattgccattgaaatcgtggaaaatgtcaagactattcaacttcta
accagcaccgagcattttttgactgagtacactactgctctcgagctccaacataaaagt
gaaatgaagaaagcttacattcaagccctaaacaacgccatctcccaaacgttcatgtat
tttgcaatgtttgtctgctatgcggtcggaactccactcatgtacaatggcattgttgac
ccaaatggcgcctttcgagcaatcaattcaatgatgatgggatcagtagctgtcatgcac
tcatctcacaacttccctgagtttgtaaaagccaaaacagcagctggaatgcttttcaag
ttgatctatagaaaaccgaaaaccggagatgttatgaaaggaaatcagttggatatccgt
gggaatattttgtttgaatcagtcaaattttcctatccccaaagacctttgcacccggtt
atgactgatcttcattttactgctcgcaacggacagacagttgcacttgtgggaccatct
ggaactggaaagagtacgtgtatcgcgatgctagaacggttttatgatgtctctggtggt
gcactgagaatcgacggacaggatatcaagactctctcccttcaccatctccgaactcaa
atggctttagttggacaagaacccagattgtttgctggaactattagagagaatgtgtgc
ttcggcttgaaagatgtgagtctagatgatgagaatcaagttataaaaattaagaaactt
caggtaccaattgaaaaagttaaccaagcattggaactggcgaatgcgtctcgattcttg
gcaaatctcccgtctggaattgacactgaggttggagagaagggatcgcagctatctgga
gggcaaaaacagcgtattgcaattgccagagcgttagtgcgagacccaaagatcctgcta
ctagatgaagcaacatccgcattggattctgaatctgaaagagcagtgcaagaagcatta
gatcgtgctcgtgaaggccgcacctgcatcacaatagctcatcgattgtcctcgatccaa
aattcagatctgattgtgtacattgatcaaggaaaagttcaagaagctggaaaccataac
catctcatgtccctcagaggcaaatactacgacctaatcaaaaagcaagatttaacatca
tga
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