Caenorhabditis briggsae (nematode): CBG_00419
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Entry
CBG_00419 CDS
T01054
Symbol
Cbr-uaf-2
Name
(RefSeq) Protein CBR-UAF-2
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CBG_00419 (Cbr-uaf-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_00419 (Cbr-uaf-2)
Spliceosome [BR:
cbr03041
]
Complex A
U2 snRNP components
U2 related factors
CBG_00419 (Cbr-uaf-2)
Complex B
CBG_00419 (Cbr-uaf-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
8574393
NCBI-ProteinID:
XP_002632396
WormBase:
CBG00419
UniProt:
A0AAE9D3Z0
A8WN17
LinkDB
All DBs
Position
IV:399926..401059
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AA seq
281 aa
AA seq
DB search
MSYGDGLSGAEYLASIYGTEKDKVNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFY
HNPVVDVRQADAFDKVGKRNDEEQRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVG
NVYVKFMKEEDAEKAKNDLNNRWFNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNF
MHLKAISAELGDRLYGRRGRRADAAGHYPSQRGGSGGGGGGGYGGGGGYGYGGGRDRDRG
GWGGGGGGGRYGGGGGGGGGYGYGGGGGGRRRSRSRDRRRY
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacggcgacgggctctccggagccgagtatctcgcttcgatttacggtaccgaa
aaagataaagtcaactgttccttcttcttcaagacaggagcttgtagacacggagataag
tgctctcgagcccatcacacgccaacgttctcaccaacggtcgtactcaagaatttttat
cacaatcctgtcgtggatgttcgtcaagccgatgccttcgataaagttggaaagcggaat
gacgaagagcagagatacttcgacgatttctatgaggaggtgttcgttgagatggaaaga
aagtatggggaagtagaagagattaacgtttgtgaaaatatcggagagcacatggtcgga
aatgtatatgtgaaattcatgaaagaagaagatgccgaaaaagccaaaaatgatttgaac
aacagatggttcaacggtcaaccgatctatgctgagttgtgcccagtcaccgatttccgt
gagtcccgttgtcgtcagcacgaagtcaccacttgctcaaaaggaggattctgtaatttc
atgcacttgaaagctatctctgctgaactcggagaccgtctctacggaagacgtggacga
cgagctgacgcagccggacattatccatcacaacgtggtggatctggtggtggcggcggt
ggaggctacggtggcggcggaggctacggatatggtggtggaagagatcgcgatcgtgga
ggatggggtggaggcggcggcggtggccgttacggcggaggaggtggtggtggcggtggc
tacggatatggcggaggcggtggtggaagacgtcgaagcagaagtcgtgatcgccgacga
tattaa
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integrated database retrieval system
