Caenorhabditis briggsae (nematode): CBG_00420
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Entry
CBG_00420 CDS
T01054
Symbol
Cbr-cyn-13
Name
(RefSeq) Protein CBR-CYN-13
KO
K09564
peptidyl-prolyl isomerase E (cyclophilin E) [EC:
5.2.1.8
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CBG_00420 (Cbr-cyn-13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_00420 (Cbr-cyn-13)
03110 Chaperones and folding catalysts [BR:
cbr03110
]
CBG_00420 (Cbr-cyn-13)
Enzymes [BR:
cbr01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
CBG_00420 (Cbr-cyn-13)
Spliceosome [BR:
cbr03041
]
Complex B
Other components
Prp19-related factors
CBG_00420 (Cbr-cyn-13)
Complex C
CBG_00420 (Cbr-cyn-13)
Chaperones and folding catalysts [BR:
cbr03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
CBG_00420 (Cbr-cyn-13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
RRM_1
RRM_7
RRM_5
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
8574394
NCBI-ProteinID:
XP_002632397
WormBase:
CBG00420
UniProt:
A8WN18
LinkDB
All DBs
Position
IV
Genome browser
AA seq
332 aa
AA seq
DB search
MNTNFPHNRKRTLYVGGFSEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD
MAEDAAMAIDNMNESELFGKTIRVNFARPPKATERSQKPVWADDEWLKKYGRGGEAAPGD
DADGEGTITESTSTAAKLPRVYLGVKIGIRYIGRIVIELRTDVTPKTAENFRCLCTGERG
YGYEGSTFHRIIPKFMLQGGDFTKGDGTGGKSIYGTKFEDENFTLRHTMPGTVSMANCGA
NTNGSQFFICTEKTDWLDGKHVVFGHVVEGMNIVRQVEQQGTPSGKPQMVVKIVESGEIE
PEKRIAAEKAASKAEKAAGAENKEPEPQAMET
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaataccaattttcctcataatcggaaacgaacgctatatgtgggtggattttcggaa
gatgttactgagaaggttctcatggccgctttcattccattcggtgatgttgttgctatt
tccattccgatggattacgaatccggtaaacatcgtggatttggtttcgttgaattcgat
atggcagaagatgcggcaatggcgattgataatatgaacgagagcgaacttttcggaaaa
actattcgtgtcaattttgctcgtcctccgaaagcaactgaacgatcgcagaagccagtt
tgggctgatgatgagtggctgaagaagtatggaagaggtggagaggctgccccaggagat
gatgcagatggcgagggtacaataaccgaatccacgtcaacggcagcaaaacttccaaga
gtttatcttggagtgaaaatcggaattcgttatattgggagaattgtaatcgagttgaga
acggatgtcacaccgaaaacagcagaaaacttccggtgtttgtgtaccggagaacgagga
tacggatatgagggttctacattccatcgcattattccaaaattcatgttgcaaggtggt
gatttcacgaaaggagatggtactgggggtaaatctatctatggaacaaagtttgaggat
gagaacttcactctccgacatacaatgccgggcacagtttcaatggcaaactgtggtgct
aacacaaacggctctcagttcttcatttgcacagagaaaacggattggttagatggaaaa
cacgtggtttttggacatgtcgtcgaaggaatgaatattgtgcggcaggttgagcaacaa
ggaaccccatctggcaagccacaaatggttgtgaaaattgtggaaagtggagaaatagaa
ccggaaaaacggattgctgctgagaaggccgcttctaaagctgaaaaggcagctggtgct
gaaaataaggagccagaaccacaagctatggaaacataa
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