Caenorhabditis briggsae (nematode): CBG_00428
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Entry
CBG_00428 CDS
T01054
Name
(RefSeq) Protein CBG00428
KO
K17925
sorting nexin-13
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cbr04990
]
CBG_00428
Domain-containing proteins not elsewhere classified [BR:
cbr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
CBG_00428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Motif
Other DBs
NCBI-GeneID:
8574401
NCBI-ProteinID:
XP_045091569
WormBase:
CBG00428
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All DBs
Position
IV:412763..415986
Genome browser
AA seq
962 aa
AA seq
DB search
MSNRFYILLGGLLFLSTFGLTGVIVIPLSVICFLAGFLYIVYQTGLEKSAELDEKLAFRL
QKYKFPSGIEQLLKNGKRLTEQNQYEEVHSMSNSPQLDLVLEEILGYITRDYIGFWYKNL
SNDKLFEQSLKRTSRRSIASLTQCLRQVEWVPLITRDVVDDFASHLRLFRKAKERTTFQM
KDDGNSDKSSTVEDLDAELLSNFFDFELEMEKTLCRDLLSTTPHYENAYLHDLVDIILYL
VMPPEDFRCRPLRFLLREVVVRKVILPTLDYLSNPNEIFQLIVWLLSEVEPKPEDFLACL
SSSTCIEELESVLKEIVNEKTVMRGKDAGGEQDTFVKQQLASLNFVELLVQRRIDYLGSQ
DSAFLSKFGEDGDQLVQLPLHVILTNSTALSQFCEFLKSAGGQNYIDFYLAIEGFKVSVE
HQMRSLAKGEISDSDAYETVKEAAKYMYDQYLSEEAITRVPLDDALMTKFLQRLKNDEPH
DLWFEAIQEKVFDVLKTDDHFFPAFKKSPAYVKMLLDLEIIDEDRNDPTLSECDSVTSFS
SQEKSEDESRCDSALRKLPLELDGSAPLEGEPVMTAIVETLGIGHQGKQTYALYNVRVTR
CVDGLEVSSWNVIRRYSDFHSLHQNLVQKFPKLATLSFPGKKTFNNLDSQFLEKRTKALN
LYLACVLQPSLLRNYPDMDRHVFDFLSQKKYANSDPLAKKLMSAMFDPIRNGVKAVGNTV
MAVPDQVFEGVTKMGAGINNAAKIIINPISSTTTPNRPPEMETDRVAASLTDTEAENIPL
RVLVLVVSEVFGAQGSAWFRRQLVTVIRHIVTPFGTSINKRIVDIVNWLTSEQQVGGYLT
SFKLFKFERDLSRNYDSRKSMWPEGELATEYVEKPAEFHHRTRLLAKTLMLSFLPDELRM
ILGTNVSYKGINTISEAFQNKNLNRRLLYVLLERFLIKVFPSNRFEKIFAQLHSKSPRTK
KI
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcgcttctacattcttctcggcggtctgctgtttctatcaacgtttgggtta
actggtgtcattgtaattcctctgagtgtcatatgcttcttggcagggttcctatacatt
gtctaccaaacgggtctagaaaagtctgcagaactcgatgagaagttggcgtttcgacta
cagaagtacaagtttccatcaggaatagagcagctgttgaaaaatggcaaacggctgact
gagcagaatcaatatgaagaagttcactctatgagcaattctccacaattagatctggtc
ctagaagaaattctcggttacatcactcgagattatatcggcttctggtacaaaaatctg
tcaaatgacaaacttttcgagcaaagtctaaaaagaacatctcgtcgttcaattgcctct
ctaactcaatgcctacgacaagtggaatgggttccactgatcactcgagacgttgtcgat
gattttgcttctcatttgcgtctgtttcgaaaagccaaagaaagaactacttttcaaatg
aaagatgacggaaattcagacaaatctagtacagttgaagacttggatgcagaattgctc
agtaactttttcgactttgagctggaaatggagaagacattgtgtagagatttactctca
actacacctcattatgagaatgcgtatctccacgatctagtcgatataattttgtatctt
gtgatgcctcctgaggatttcagatgtcgcccattaaggtttttacttcgagaagttgtt
gtccgaaaagttatacttccaacgctagactatctttccaacccaaatgaaattttccaa
ttgatcgtatggttgctgagtgaagtggaaccaaagccagaggactttcttgcctgtctc
tcgagttccacgtgtatagaagagctcgaatcagtgctgaaggaaattgttaacgagaaa
actgtgatgcgaggaaaagatgctggtggtgaacaagatacattcgttaaacaacaactg
gctagtctgaactttgtcgaattacttgttcaacgtagaatcgattatcttggatcacaa
gattcagcatttttatcgaaattcggtgaagatggtgaccaacttgttcaacttcccctc
catgtgattcttacgaattcgacagctctttctcaattttgcgaattcctcaaatctgcc
ggaggccagaattacatagacttttatttggcaatagagggattcaaagtatcagtagag
catcagatgcgatcgcttgcaaagggggagatttccgactctgatgcctacgagacggtc
aaagaagcagccaagtacatgtatgatcagtacttgtcggaagaggctataacacgtgtt
cctctcgacgatgctctcatgacaaagtttctacaacgtcttaaaaatgacgaacctcac
gatctttggtttgaagccattcaagagaaggtgttcgatgttttgaaaactgacgatcac
ttctttccggcgttcaaaaagtctccagcctatgtgaaaatgctgttagatttagaaata
attgacgaagaccgtaacgatccgacattgtcagaatgtgattcagtgacctcattctca
tcacaagaaaagtcagaagacgagtctcgttgcgactcagcgcttcgaaagcttccactc
gagttagatggatcagctccattggaaggagagccagtaatgacagcgatcgtggagact
ttaggaattggacatcaagggaaacagacatatgcactatacaacgttcgagttactcga
tgtgttgatggactggaagtgagcagttggaatgttatcaggagatactccgatttccat
tcccttcatcaaaaccttgttcaaaagtttccaaaactggcaacactgtcgtttcctggc
aaaaagacattcaataatttggactcgcaatttttggaaaaacggacaaaagctctgaat
ttgtatttagcatgtgtcctccaaccatcacttctacgcaactatcccgatatggatcgt
catgtgtttgacttcctgtctcagaagaaatatgcaaactcggatcctctcgccaagaag
ctgatgtccgcaatgttcgatccaatcagaaatggagtgaaagcagttggtaatactgtt
atggcggttccagatcaagtatttgaaggtgttactaaaatgggagcaggaataaacaat
gcagcgaagattatcattaatcctatcagcagtaccaccacaccaaacagaccgcctgaa
atggaaaccgatcgagttgctgcttctttaactgacactgaagctgagaatattcctctt
cgagttttggttctagtagtaagcgaagtgtttggagcgcaaggaagtgcgtggttccgg
cggcaactggttaccgttatccgacacattgtgactcctttcggaacttcgatcaataaa
cggatagttgatattgttaactggttgactagtgaacaacaagtcggcggttatctgact
tctttcaagttattcaaatttgaaagagatttatctagaaattatgattccaggaaatcg
atgtggccagaaggcgaattggcaaccgaatatgtggaaaaaccagctgaattccatcac
agaacacgccttctagcaaaaactcttatgctatcttttcttcctgatgaattacggatg
atcctgggaaccaacgttagctataaggggatcaacacaatatcagaagcattccagaac
aagaatctcaaccgtcgtctcctttacgtccttctagaacgcttcctgatcaaagtcttc
ccatcgaatcgatttgagaaaattttcgcacaacttcattcaaaatcacccagaactaaa
aagatatga
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