Caenorhabditis briggsae (nematode): CBG_00621
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Entry
CBG_00621 CDS
T01054
Symbol
Cbr-fars-3
Name
(RefSeq) Protein CBR-FARS-3
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CBG_00621 (Cbr-fars-3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cbr01007
]
CBG_00621 (Cbr-fars-3)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbr03016
]
CBG_00621 (Cbr-fars-3)
Enzymes [BR:
cbr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
CBG_00621 (Cbr-fars-3)
Amino acid related enzymes [BR:
cbr01007
]
Aminoacyl-tRNA synthetase
Class II (U)
CBG_00621 (Cbr-fars-3)
Transfer RNA biogenesis [BR:
cbr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CBG_00621 (Cbr-fars-3)
Prokaryotic type
CBG_00621 (Cbr-fars-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
WxLIP_HBD
DUF2740
Motif
Other DBs
NCBI-GeneID:
8571726
NCBI-ProteinID:
XP_002630211
WormBase:
CBG00621
UniProt:
A8WNF7
A0AAE9DHH3
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All DBs
Position
II:complement(3912329..3914314)
Genome browser
AA seq
591 aa
AA seq
DB search
MPTVGIKKVILDKHFNRNYTEKEFDELCFEYGLELDEITSEKAAVEKERGTDAAVDLNDQ
EVYKIDIPANRYDLLSVEGLARAIRIFKQEIPSPQYKFADVPKSGLQKIIVKKETAQVRP
FVVGAVLRNISFDADSYASFIDLQDKLHQNICRKRTLVAIGTHDLDTVQGPFEYRAEAPK
DIKFKPLNQTKEYTAEELMTLYSSDSHLKAYLPIIQNHPVYPVIYDKNGVVCSMPPIING
EHSKITLNTKNVFIEATATDKQKAFVVLDTIVTLFSQYCAKPFTVEQVEVVYEETGVKEV
YPLLAYREMTVTTPEINTKIGIQLKEEEMATLLNKMSLKAEVVGKETLKVVVPPTRHDIL
HACDVAEDVGVAYGYNNLVTRLPESNTVAVAFPINKLCDNLRIEIAAAGWTEALNFALCS
RDDISTKLRQPEALSHAVHIGNPKTLEFQVARTSLLPGLLKTLASNRDMPLPLKLFELQD
VIVKDSTMDVGARNERRLAAVYYNKAAGFEIIQGFLDRMMRMLNVNPAKADNGYYIEADE
NPTYFPGRCAKIIGPKGVVLGHIGALHPEVITSFGLTLPCGAVEFNVEPFL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgccaactgtgggaatcaagaaagtcatcctcgacaaacacttcaatcggaattatacc
gagaaggagttcgacgagctttgcttcgaatatggactcgaactagatgaaattacttcc
gagaaggccgccgtcgagaaagagagaggaaccgatgccgctgttgatttgaacgatcag
gaagtctacaaaatcgatattccagccaatcgttatgacttgctcagcgtggaaggattg
gctcgtgccattcgaatcttcaagcaagaaatcccatctcctcaatacaaattcgccgac
gttccgaaatctggtctccagaagattatcgtgaagaaagagactgcgcaagttcgtccg
ttcgtcgtcggcgccgtccttcgcaacatctcattcgacgccgatagctacgcgtcgttc
atcgatctccaggacaaacttcatcagaatatctgcagaaagcgtactctcgttgccatc
ggaacgcatgacttggacactgttcaaggaccgttcgagtatcgtgccgaggcaccgaaa
gatatcaagttcaagccattgaaccaaacgaaagagtacactgctgaagagttgatgacc
ttgtattcaagtgatagtcatttgaaggcataccttccaattatccaaaaccatccagtc
tatccagttatctatgataagaatggtgtcgtttgctccatgccaccaatcatcaacgga
gaacattccaagatcactttgaacaccaagaacgtcttcatcgaggcgacagctactgac
aagcagaaggccttcgtggttcttgacacaatcgtgacccttttctctcaatactgcgcc
aaaccattcaccgttgagcaagttgaagttgtctatgaagagactggagtcaaggaggtg
tatccactgctcgcctatcgtgagatgaccgtgacgacgccagaaatcaacacaaaaatt
ggaattcagttgaaggaagaagagatggccacgcttctcaacaagatgtcgttgaaggca
gaagttgtgggaaaggagacgttgaaggtggtggtgccacccacccgtcacgatattctt
cacgcttgtgatgttgcagaagacgttggagttgcttatgggtacaataatttggttaca
agacttccagagtccaacaccgttgccgtcgccttccctatcaacaagctctgcgacaat
cttcgtatcgaaatcgccgctgccggctggacagaagccctgaatttcgctctctgcagt
cgtgacgacatctccacgaagctccgtcagccagaagctctctctcatgctgtgcatatc
ggaaatccaaaaaccctagaattccaagtggctcgtacctctcttctccctggccttctg
aagacgttggcttccaaccgtgatatgccacttccgctgaaacttttcgagcttcaagat
gtgattgtgaaggattcgacgatggatgtgggagctagaaacgagagacgtctggctgca
gtttactataacaaggctgccggttttgagattattcaaggattcttggatcgaatgatg
cggatgttgaatgtcaacccggctaaggctgataacggatactatattgaggcagacgag
aacccgacttatttcccaggaagatgtgcaaagatcattggcccaaagggagtggttctc
ggacacatcggagcacttcacccagaagttatcacatcgttcggactcactttgccatgt
ggagccgttgaattcaacgtcgaaccattcctttaa
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