Caenorhabditis briggsae (nematode): CBG_00746
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Entry
CBG_00746 CDS
T01054
Name
(RefSeq) Protein CBG00746
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04137
Mitophagy - animal
cbr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CBG_00746
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
CBG_00746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_00746
03009 Ribosome biogenesis [BR:
cbr03009
]
CBG_00746
04131 Membrane trafficking [BR:
cbr04131
]
CBG_00746
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbr04147
]
CBG_00746
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CBG_00746
Ribosome biogenesis [BR:
cbr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CBG_00746
Membrane trafficking [BR:
cbr04131
]
SNARE
SNARE associated proteins
Others
CBG_00746
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CBG_00746
Exosome [BR:
cbr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CBG_00746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
RNA_helicase
AAA_28
NPHP3_N
Mg_chelatase
Parvo_NS1
nSTAND3
IstB_IS21
ABC_tran
AAA_18
Vps4_C
AAA_7
AAA_25
ATPase_2
ResIII
Sigma54_activ_2
NACHT
DUF815
TsaE
Viral_helicase1
NB-ARC
AAA_lid_PRS2_C
AAA_17
Rad17
bpMoxR
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
8571825
NCBI-ProteinID:
XP_002630310
WormBase:
CBG00746
UniProt:
A0AAE9E8K1
A8WN57
LinkDB
All DBs
Position
II:3351957..3354544
Genome browser
AA seq
811 aa
AA seq
DB search
MAQVPVQKDEKEKKNDELATAILKDKSRPNRLIIDQSENDDNSMVSLSQAKMDELGLFRG
DSVILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSAQLEYGKRIH
VLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACI
VAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGV
KPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEK
NSPAILFIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDG
ALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLC
SEAALQQIREKMELIDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNTT
WNDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC
QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGG
AADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQ
IFKASLRKTPLAADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQERERQD
RRARGEELMEDETVDPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNN
FKFPGEAPSGGQPVGAGNGGAGGNDDDDLYN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagttcctgtccagaaggacgagaaggaaaagaaaaatgatgagctggcaaca
gccatccttaaggacaaatccagaccaaatcgtttgatcatcgaccagtcggaaaacgat
gacaactcgatggtctcgctctcacaagcaaaaatggacgaacttggactcttccgtgga
gactcggtcattctgaaaggaaagaagcgacgagagacagtgtcgattgtgttgaatgct
gacaactgtcccaatgataagatcaagatgaacaaggtggtgcgcaacaatctcagaagt
cgtctcggtgacgtcgtcagcatttctagtgcccaattggagtacggaaagcgcattcat
gttcttcctattgatgacactattgaaggattgactggaaacttgttcgatgtgtttctt
cgtccatacttcacggatgcctaccgtccagttcacaaaggagacatattcacagttcag
gctgcgatgagaactgtcgagttcaaggttgttgaaactgacccagctccggcctgcatc
gtcgctccagacactgtcatccactacgaaggtgacccgatcaagagagaagaggaagag
gaggcactcaatgaggtcggatacgacgatttgggaggagttcgtaagcaactggctcaa
atcaaggagatggtcgagctgccactccgtcacccacaactcttcaaggctattggagtc
aagccaccacgtggaattctgttgttcggaccaccaggaacaggaaaaactttgatcgca
agagccgttgccaatgagactggtgcattcttcttccttatcaatggtccagaaatcatg
tcgaagatgtccggagagtccgaatccaatttgagaaaggctttcgccgaatgtgagaag
aactcgccagccatcctcttcattgacgaaatagacgctattgctccaaagagagagaag
gctcatggagaagtcgagaagcgtattgtctctcagctcctcactcttatggatgggctc
aagactcgtgctcatgttgtcgttattgctgccaccaaccgtccaaattccattgatgga
gctcttcgtcgtttcgggcgtttcgatcgcgaaatcgacattggaattccagacgctgtt
ggacgtctagaaattctcagaatccacaccaagaacatgaagctcggagaagatgtcgat
ttggagcaagtcgcaaatgagtgccacggattcgttggtgccgatttggcttctctttgc
tcggaagctgctcttcaacaaattcgtgagaaaatggagctcatcgatttggaagatgat
accattgacgccgaagtactgaactctttggccgtcaccatggaaaatttcagattcgca
atgggaaaatcgtctccttctgctctccgggaagccgtcgtcgaaactccaaataccaca
tggaacgacatcggaggacttcagaacgtcaagcgagagcttcaagagcttgttcaatat
ccagtcgaacacccagaaaagtatctcaagttcggaatgcagccatcgcgtggagttctc
ttctatggaccaccaggatgcggtaaaacacttcttgccaaggctatcgctaacgaatgt
caggccaatttcatctccatcaagggtccagagctcctcactatgtggttcggagaatcc
gaagccaatgttcgtgatgtttttgataaggcacgtgccgctgctccgtgtgttctcttc
ttcgacgaactcgattccatcgccaaagccagaggaggaagcgtcggagacgccggaggt
gctgctgatcgtgtgatcaatcaagttctcaccgagatggacggaatgaacgcgaagaag
aatgtcttcatcatcggagccaccaatagaccagacatcattgatccagctgttcttcgt
ccaggacgtctcgatcagctcatctacattccacttccagatgaagcgtccagactccaa
atcttcaaggccagtcttcgcaagactccacttgctgctgatctcgatttgaacttcctt
gccaagaataccgtcggattctcaggagccgatttgactgaaatttgccaacgtgcttgc
aagcttgccatccgcgagtcgatcgaacgtgaaatccgtcaagagagggaacgtcaagac
agaagagctcgtggagaggaactcatggaagacgagactgttgatccagtgccagaaata
actcgcgctcacttcgaggaagccatgaagttcgccagacgatcagtcactgataacgat
atcagaaagtacgagatgttcgcccagacgctccagcagtctcgtggcttcggaaataac
ttcaagttcccaggagaggctccatcgggtggccagccagttggagcaggaaacggaggt
gccggtggaaacgatgacgatgatctttacaactag
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